PDB: 41522 件ウェブページステータス検索Chemie searchBIRD

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7ZGQ	Polymerase module of yeast CPF in complex with the yPIM of Cft2 分子名称: Cleavage factor two protein 2, Polyadenylation factor subunit 2, Protein CFT1, ... 著者 Rodriguez-Molina, J.B, Passmore, L.A. 登録日 2022-04-04 公開日 2022-05-25 最終更新日 2022-07-20 実験手法 ELECTRON MICROSCOPY (2.8 Å) 主引用文献 Mpe1 senses the binding of pre-mRNA and controls 3' end processing by CPF. Mol.Cell, 82, 2022
3RAM	Crystal structure of HmrA 分子名称: GLYCEROL, HmrA protein, ZINC ION 著者 Botelho, T, Guevara, T, Marrero, A, Gomis-Ruth, F.X. 登録日 2011-03-28 公開日 2011-05-25 最終更新日 2011-08-10 実験手法 X-RAY DIFFRACTION (2.7 Å) 主引用文献 Structural and Functional Analyses Reveal That Staphylococcus aureus Antibiotic Resistance Factor HmrA Is a Zinc-dependent Endopeptidase. J.Biol.Chem., 286, 2011
2GSZ	Structure of A. aeolicus PilT with 6 monomers per asymmetric unit 分子名称: ADENOSINE-5'-DIPHOSPHATE, SULFATE ION, twitching motility protein PilT 著者 Forest, K.T, Satyshur, K.A. 登録日 2006-04-27 公開日 2007-03-20 最終更新日 2023-11-15 実験手法 X-RAY DIFFRACTION (4.2 Å) 主引用文献 Crystal structures of the pilus retraction motor PilT suggest large domain movements and subunit cooperation drive motility. Structure, 15, 2007
6LU9	Rat ionotropic Glutamate Delta-2 receptor in complex with 7-CKA and Calcium 分子名称: Glutamate receptor ionotropic, delta-2 著者 Kumar, J, Burada, A.P. 登録日 2020-01-27 公開日 2020-06-17 最終更新日 2020-12-30 実験手法 ELECTRON MICROSCOPY (8.8 Å) 主引用文献 The architecture of GluD2 ionotropic delta glutamate receptor elucidated by cryo-EM. J.Struct.Biol., 211, 2020
5IM0	Crystal structure of the RNA recognition motif of mRNA decay regulator AUF1 分子名称: Heterogeneous nuclear ribonucleoprotein D0 著者 Choi, Y.J, Chang, J.H. 登録日 2016-03-05 公開日 2016-08-03 実験手法 X-RAY DIFFRACTION (1.7 Å) 主引用文献 Crystal Structure of the N-Terminal RNA Recognition Motif of mRNA Decay Regulator AUF1. Biomed Res Int, 2016, 2016
6LLW	Crystal Structure of Fagopyrum esculentum M UGT708C1 complexed with UDP 分子名称: UDP-glycosyltransferase 708C1, URIDINE-5'-DIPHOSPHATE 著者 Wang, X, Liu, M. 登録日 2019-12-23 公開日 2020-08-05 最終更新日 2023-11-22 実験手法 X-RAY DIFFRACTION (2.256 Å) 主引用文献 Crystal Structures of theC-Glycosyltransferase UGT708C1 from Buckwheat Provide Insights into the Mechanism ofC-Glycosylation. Plant Cell, 32, 2020
7DMW	Crystal structure of CcpC regulatory domain in complex with citrate from Bacillus amyloliquefaciens 分子名称: CITRATE ANION, CcpC 著者 Chen, J, Wang, L, Shang, F, Liu, W, Chen, Y, Lan, J, Bu, T, Bai, X, Xu, Y. 登録日 2020-12-08 公開日 2021-10-27 最終更新日 2024-05-29 実験手法 X-RAY DIFFRACTION (2.29 Å) 主引用文献 Functional and structural analysis of catabolite control protein C that responds to citrate. Sci Rep, 11, 2021
7DKD	Stenotrophomonas maltophilia DPP7 in complex with Asn-Tyr 分子名称: ASPARAGINE, Dipeptidyl-peptidase, GLYCEROL, ... 著者 Sakamoto, Y, Nakamura, A, Suzuki, Y, Honma, N, Roppongi, S, Kushibiki, C, Yonezawa, N, Takahashi, M, Shida, Y, Gouda, H, Nonaka, T, Ogasawara, W, Tanaka, N. 登録日 2020-11-23 公開日 2021-11-03 最終更新日 2023-11-29 実験手法 X-RAY DIFFRACTION (1.92 Å) 主引用文献 Structural basis for an exceptionally strong preference for asparagine residue at the S2 subsite of Stenotrophomonas maltophilia dipeptidyl peptidase 7. Sci Rep, 11, 2021
7DKC	Stenotrophomonas maltophilia DPP7 in complex with Tyr-Tyr 分子名称: Dipeptidyl-peptidase, GLYCEROL, TYROSINE 著者 Sakamoto, Y, Nakamura, A, Suzuki, Y, Honma, N, Roppongi, S, Kushibiki, C, Yonezawa, N, Takahashi, M, Shida, Y, Gouda, H, Nonaka, T, Ogasawara, W, Tanaka, N. 登録日 2020-11-23 公開日 2021-11-03 最終更新日 2023-11-29 実験手法 X-RAY DIFFRACTION (1.86 Å) 主引用文献 Structural basis for an exceptionally strong preference for asparagine residue at the S2 subsite of Stenotrophomonas maltophilia dipeptidyl peptidase 7. Sci Rep, 11, 2021
4CYY	The structure of vanin-1: defining the link between metabolic disease, oxidative stress and inflammation 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, PANTETHEINASE 著者 Boersma, Y.L, Newman, J, Adams, T.E, Sparrow, L, Cowieson, N, Lucent, D, Krippner, G, Bozaoglu, K, Peat, T.S. 登録日 2014-04-16 公開日 2014-12-10 最終更新日 2023-12-20 実験手法 X-RAY DIFFRACTION (2.89 Å) 主引用文献 The Structure of Vanin-1: A Key Enzyme Linking Metabolic Disease and Inflammation Acta Crystallogr.,Sect.D, 70, 2014
4GUM	Cystal structure of locked-trimer of human MIF 分子名称: CHLORIDE ION, Macrophage migration inhibitory factor 著者 Fan, C, Lolis, E. 登録日 2012-08-29 公開日 2013-07-03 最終更新日 2020-11-18 実験手法 X-RAY DIFFRACTION (2.33 Å) 主引用文献 MIF intersubunit disulfide mutant antagonist supports activation of CD74 by endogenous MIF trimer at physiologic concentrations. Proc.Natl.Acad.Sci.USA, 110, 2013
7ZHG	High-resolution cryo-EM structure of Pyrococcus abyssi 30S ribosomal subunit bound to mRNA and initiator tRNA anticodon stem-loop 分子名称: 30S ribosomal protein S10, 30S ribosomal protein S11, 30S ribosomal protein S12, ... 著者 Kazan, R, Bourgeois, G, Mechulam, Y, Coureux, P.D, Schmitt, E. 登録日 2022-04-06 公開日 2022-06-29 最終更新日 2024-04-24 実験手法 ELECTRON MICROSCOPY (2.25 Å) 主引用文献 Role of aIF5B in archaeal translation initiation. Nucleic Acids Res., 50, 2022
4GWT	Structure of racemic Pin1 WW domain cocrystallized with DL-malic acid 分子名称: (2S)-2-hydroxybutanedioic acid, Peptidyl-prolyl cis-trans isomerase NIMA-interacting 1 著者 Mortenson, D.E, Yun, H.G, Gellman, S.H, Forest, K.T. 登録日 2012-09-03 公開日 2013-10-16 最終更新日 2023-09-13 実験手法 X-RAY DIFFRACTION (2.25 Å) 主引用文献 Evidence for small-molecule-mediated loop stabilization in the structure of the isolated Pin1 WW domain. Acta Crystallogr.,Sect.D, 69, 2013
6LRB	The A form apo structure of NrS-1 C terminal region-CTR 分子名称: MAGNESIUM ION, Primase 著者 Chen, X, Gan, J. 登録日 2020-01-15 公開日 2020-04-08 最終更新日 2023-11-29 実験手法 X-RAY DIFFRACTION (2.65 Å) 主引用文献 Structural studies reveal a ring-shaped architecture of deep-sea vent phage NrS-1 polymerase. Nucleic Acids Res., 48, 2020
7DKE	Stenotrophomonas maltophilia DPP7 in complex with Phe-Tyr 分子名称: Dipeptidyl-peptidase, GLYCEROL, PHENYLALANINE, ... 著者 Sakamoto, Y, Nakamura, A, Suzuki, Y, Honma, N, Roppongi, S, Kushibiki, C, Yonezawa, N, Takahashi, M, Shida, Y, Gouda, H, Nonaka, T, Ogasawara, W, Tanaka, N. 登録日 2020-11-23 公開日 2021-11-03 最終更新日 2023-11-29 実験手法 X-RAY DIFFRACTION (1.91 Å) 主引用文献 Structural basis for an exceptionally strong preference for asparagine residue at the S2 subsite of Stenotrophomonas maltophilia dipeptidyl peptidase 7. Sci Rep, 11, 2021
2GVL	Crystal Structure of Murine NMPRTase 分子名称: Nicotinamide phosphoribosyltransferase 著者 Khan, J.A, Tao, X, Tong, L. 登録日 2006-05-02 公開日 2006-07-25 最終更新日 2011-07-13 実験手法 X-RAY DIFFRACTION (2.1 Å) 主引用文献 Molecular basis for the inhibition of human NMPRTase, a novel target for anticancer agents. Nat.Struct.Mol.Biol., 13, 2006
6LRQ	Cryo-EM structure of A53T alpha-synuclein amyloid fibril 分子名称: Alpha-synuclein 著者 Sun, Y.P, Zhao, K, Liu, C. 登録日 2020-01-16 公開日 2020-04-08 最終更新日 2024-03-27 実験手法 ELECTRON MICROSCOPY (3.49 Å) 主引用文献 Cryo-EM structure of full-length alpha-synuclein amyloid fibril with Parkinson's disease familial A53T mutation. Cell Res., 30, 2020
7DKB	Stenotrophomonas maltophilia DPP7 in complex with Val-Tyr 分子名称: Dipeptidyl-peptidase, TYROSINE, VALINE 著者 Sakamoto, Y, Nakamura, A, Suzuki, Y, Honma, N, Roppongi, S, Kushibiki, C, Yonezawa, N, Takahashi, M, Shida, Y, Gouda, H, Nonaka, T, Ogasawara, W, Tanaka, N. 登録日 2020-11-23 公開日 2021-11-03 最終更新日 2023-11-29 実験手法 X-RAY DIFFRACTION (2.03 Å) 主引用文献 Structural basis for an exceptionally strong preference for asparagine residue at the S2 subsite of Stenotrophomonas maltophilia dipeptidyl peptidase 7. Sci Rep, 11, 2021
2GW6	NMR structure of the human tRNA endonuclease SEN15 subunit 分子名称: tRNA-splicing endonuclease subunit Sen15 著者 Song, J, Markley, J.L, Center for Eukaryotic Structural Genomics (CESG) 登録日 2006-05-03 公開日 2006-05-16 最終更新日 2024-05-29 実験手法 SOLUTION NMR 主引用文献 Three-dimensional structure determined for a subunit of human tRNA splicing endonuclease (Sen15) reveals a novel dimeric fold. J.Mol.Biol., 366, 2007
7DG4	The co-crystal structure of DYRK2 with a small molecule inhibitor 6 分子名称: 2,7-dimethoxy-9-(piperidin-4-ylmethylsulfanyl)acridine, Dual specificity tyrosine-phosphorylation-regulated kinase 2 著者 Wei, T, Xiao, J. 登録日 2020-11-10 公開日 2021-11-10 最終更新日 2023-11-29 実験手法 X-RAY DIFFRACTION (2.58 Å) 主引用文献 Selective inhibition reveals the regulatory function of DYRK2 in protein synthesis and calcium entry. Elife, 11, 2022
4GZ1	Mus Musculus Tdp2 reaction product (5'-phosphorylated DNA)-Mg2+ complex at 1.5 Angstroms resolution 分子名称: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, DNA (5'-D(P*CP*CP*GP*AP*AP*TP*TP*CP*G)-3'), FORMIC ACID, ... 著者 Schellenberg, M.J, Williams, R.S. 登録日 2012-09-05 公開日 2012-10-31 最終更新日 2024-02-28 実験手法 X-RAY DIFFRACTION (1.5 Å) 主引用文献 Mechanism of repair of 5'-topoisomerase II-DNA adducts by mammalian tyrosyl-DNA phosphodiesterase 2. Nat.Struct.Mol.Biol., 19, 2012
4GYN	The E142L mutant of the amidase from Geobacillus pallidus 分子名称: Aliphatic amidase, CHLORIDE ION 著者 Weber, B.W, Sewell, B.T, Kimani, S.W, Varsani, A, Cowan, D.A, Hunter, R. 登録日 2012-09-05 公開日 2013-08-21 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 The mechanism of the amidases: mutating the glutamate adjacent to the catalytic triad inactivates the enzyme due to substrate mispositioning. J.Biol.Chem., 288, 2013
6M7K	Structure of mouse RECON (AKR1C13) in complex with cyclic AMP-AMP-GMP (cAAG) 分子名称: 1,2-ETHANEDIOL, Aldo-keto reductase family 1 member C13, cyclic AMP-AMP-GMP 著者 Eaglesham, J.B, Whiteley, A.T, de Oliveira Mann, C.C, Morehouse, B.R, Nieminen, E.A, King, D.S, Lee, A.S.Y, Mekalanos, J.J, Kranzusch, P.J. 登録日 2018-08-20 公開日 2019-02-20 最終更新日 2023-10-11 実験手法 X-RAY DIFFRACTION (1.1 Å) 主引用文献 Bacterial cGAS-like enzymes synthesize diverse nucleotide signals. Nature, 567, 2019
4H07	Complex of G65T Myoglobin with Phenol in its Proximal Cavity 分子名称: 1,2-ETHANEDIOL, Myoglobin, PHENOL, ... 著者 Lebioda, L, Lovelace, L.L, Celeste, L.R, Huang, X, Wang, C, Shengfang, S, Dawson, J.H. 登録日 2012-09-07 公開日 2012-11-21 最終更新日 2024-02-28 実験手法 X-RAY DIFFRACTION (1.14 Å) 主引用文献 Complex of myoglobin with phenol bound in a proximal cavity. Acta Crystallogr.,Sect.F, 68, 2012
4IJ7	Crystal structure of Odorant Binding Protein 48 from Anopheles gambiae (AgamOBP48) with PEG 分子名称: 2,5,8,11,14,17,20,23,26,29,32,35,38,41,44,47,50,53,56,59,62,65,68,71,74,77,80-HEPTACOSAOXADOOCTACONTAN-82-OL, Odorant binding protein-8, SODIUM ION 著者 Zographos, S.E, Tsitsanou, K.E, Drakou, C.E. 登録日 2012-12-21 公開日 2013-10-16 最終更新日 2023-09-20 実験手法 X-RAY DIFFRACTION (2.25 Å) 主引用文献 Crystal and Solution Studies of the "Plus-C" Odorant-binding Protein 48 from Anopheles gambiae: CONTROL OF BINDING SPECIFICITY THROUGH THREE-DIMENSIONAL DOMAIN SWAPPING. J.Biol.Chem., 288, 2013

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