PDB: 223790 件ウェブページステータス検索Chemie searchBIRD

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3SSK	Engineered high-affinity halide-binding protein derived from YFP: bromide complex 分子名称: BROMIDE ION, Green fluorescent protein 著者 Wang, W, Grimley, J.S, Beese, L.S, Hellinga, H.W. 登録日 2011-07-08 公開日 2012-07-11 最終更新日 2023-11-15 実験手法 X-RAY DIFFRACTION (1.361 Å) 主引用文献 Determination of engineered chloride-binding site structures in fluorescent proteins reveals principles of halide recognition To be Published
2O7I	The X-ray crystal structure of a thermophilic cellobiose binding protein bound with cellobiose 分子名称: Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein, beta-D-glucopyranose-(1-4)-beta-D-glucopyranose 著者 Cuneo, M.J, Hellinga, H.W. 登録日 2006-12-11 公開日 2007-03-20 最終更新日 2023-08-30 実験手法 X-RAY DIFFRACTION (1.5 Å) 主引用文献 Structural Analysis of Semi-specific Oligosaccharide Recognition by a Cellulose-binding Protein of Thermotoga maritima Reveals Adaptations for Functional Diversification of the Oligopeptide Periplasmic Binding Protein Fold. J.Biol.Chem., 284, 2009
3SSW	E. coli trp aporepressor 分子名称: Trp operon repressor 著者 Benoff, B, Carey, J, Berman, H.M, Lawson, C.L. 登録日 2011-07-08 公開日 2011-07-20 最終更新日 2023-09-13 実験手法 X-RAY DIFFRACTION (1.6693 Å) 主引用文献 Environment-dependent long-range structural distortion in a temperature-sensitive point mutant. Protein Sci., 21, 2012
3STT	Crystal Structure of tomato Methylketone Synthase I Apo form 分子名称: DECANOIC ACID, Methylketone synthase I 著者 Auldridge, M.E, Austin, M.B, Noel, J.P. 登録日 2011-07-11 公開日 2012-05-02 最終更新日 2023-09-13 実験手法 X-RAY DIFFRACTION (2.24 Å) 主引用文献 Emergent Decarboxylase Activity and Attenuation of alpha/beta-Hydrolase Activity during the Evolution of Methylketone Biosynthesis in Tomato. Plant Cell, 24, 2012
3SU4	Crystal structure of NS3/4A protease variant R155K in complex with vaniprevir 分子名称: (5R,7S,10S)-10-tert-butyl-N-{(1R,2R)-1-[(cyclopropylsulfonyl)carbamoyl]-2-ethylcyclopropyl}-15,15-dimethyl-3,9,12-trioxo-6,7,9,10,11,12,14,15,16,17,18,19-dodecahydro-1H,5H-2,23:5,8-dimethano-4,13,2,8,11-benzodioxatriazacyclohenicosine-7(3H)-carboxamide, NS3 protease,NS4A protein, SULFATE ION, ... 著者 Schiffer, C.A, Romano, K.P. 登録日 2011-07-11 公開日 2012-09-05 最終更新日 2024-02-28 実験手法 X-RAY DIFFRACTION (2.255 Å) 主引用文献 The Molecular Basis of Drug Resistance against Hepatitis C Virus NS3/4A Protease Inhibitors. Plos Pathog., 8, 2012
2O8H	Crystal structure of the catalytic domain of rat phosphodiesterase 10A 分子名称: 6,7-DIMETHOXY-4-{8-[(4-METHYLPIPERAZIN-1-YL)SULFONYL]-3,4-DIHYDROISOQUINOLIN-2(1H)-YL}QUINAZOLINE, MAGNESIUM ION, Phosphodiesterase-10A, ... 著者 Pandit, J, Marr, E.S. 登録日 2006-12-12 公開日 2007-01-09 最終更新日 2024-04-03 実験手法 X-RAY DIFFRACTION (1.8 Å) 主引用文献 Discovery of a series of 6,7-dimethoxy-4-pyrrolidylquinazoline PDE10A inhibitors J.Med.Chem., 50, 2007
3DK8	Catalytic cycle of human glutathione reductase near 1 A resolution 分子名称: FLAVIN-ADENINE DINUCLEOTIDE, GLUTATHIONE, GLYCEROL, ... 著者 Berkholz, D.S, Faber, H.R, Savvides, S.N, Karplus, P.A. 登録日 2008-06-24 公開日 2008-08-05 最終更新日 2023-08-30 実験手法 X-RAY DIFFRACTION (1.1 Å) 主引用文献 Catalytic cycle of human glutathione reductase near 1 A resolution. J.Mol.Biol., 382, 2008
3T71	Crystal Structure of Steccherinum ochraceum Laccase obtained by multi-crystals composite data collection technique (90% dose) 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, COPPER (II) ION, ... 著者 Ferraroni, M, Briganti, F, Matera, I, Kolomytseva, M, Golovleva, L, Scozzafava, A, Chernykh, A.M. 登録日 2011-07-29 公開日 2012-04-18 最終更新日 2023-09-13 実験手法 X-RAY DIFFRACTION (2.15 Å) 主引用文献 Reaction intermediates and redox state changes in a blue laccase from Steccherinum ochraceum observed by crystallographic high/low X-ray dose experiments. J.Inorg.Biochem., 111, 2012
3DCI	The Structure of a putative arylesterase from Agrobacterium tumefaciens str. C58 分子名称: ACETIC ACID, Arylesterase, CHLORIDE ION, ... 著者 Cuff, M.E, Xu, X, Zheng, H, Binkowski, T.A, Edwards, A, Savchenko, A, Joachimiak, A, Midwest Center for Structural Genomics (MCSG) 登録日 2008-06-03 公開日 2008-09-30 最終更新日 2017-10-25 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 The Structure of a putative arylesterase from Agrobacterium tumefaciens str. C58 TO BE PUBLISHED
2ONP	Arg475Gln Mutant of Human Mitochondrial Aldehyde Dehydrogenase, complexed with NAD+ 分子名称: 1,2-ETHANEDIOL, Aldehyde dehydrogenase, GUANIDINE, ... 著者 Larson, H.N, Hurley, T.D. 登録日 2007-01-24 公開日 2007-03-06 最終更新日 2023-08-30 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Structural and functional consequences of coenzyme binding to the inactive asian variant of mitochondrial aldehyde dehydrogenase: roles of residues 475 and 487. J.Biol.Chem., 282, 2007
3SV8	Crystal structure of NS3/4A protease variant D168A in complex with Telaprevir 分子名称: (1S,3aR,6aS)-2-[(2S)-2-({(2S)-2-cyclohexyl-2-[(pyrazin-2-ylcarbonyl)amino]acetyl}amino)-3,3-dimethylbutanoyl]-N-[(2R,3S)-1-(cyclopropylamino)-2-hydroxy-1-oxohexan-3-yl]octahydrocyclopenta[c]pyrrole-1-carboxamide, GLYCEROL, NS3 protease, ... 著者 Schiffer, C.A, Romano, K.P. 登録日 2011-07-12 公開日 2012-09-05 最終更新日 2017-11-08 実験手法 X-RAY DIFFRACTION (2.5 Å) 主引用文献 The Molecular Basis of Drug Resistance against Hepatitis C Virus NS3/4A Protease Inhibitors. Plos Pathog., 8, 2012
3T88	Crystal structure of Escherichia coli MenB in complex with substrate analogue, OSB-NCoA 分子名称: 1,4-Dihydroxy-2-naphthoyl-CoA synthase, CHLORIDE ION, GLYCEROL, ... 著者 Li, H.-J, Li, X, Liu, N, Zhang, H, Truglio, J, Mishra, S, Kisker, C, Garcia-Diaz, M, Tonge, P. 登録日 2011-08-01 公開日 2011-08-24 最終更新日 2023-09-13 実験手法 X-RAY DIFFRACTION (1.998 Å) 主引用文献 Mechanism of the Intramolecular Claisen Condensation Reaction Catalyzed by MenB, a Crotonase Superfamily Member. Biochemistry, 50, 2011
2OSY	Endo-glycoceramidase II from Rhodococcus sp.: Lactosyl-Enzyme Intermediate 分子名称: Endoglycoceramidase II, SODIUM ION, beta-D-galactopyranose-(1-4)-alpha-D-glucopyranose 著者 Caines, M.E.C, Strynadka, N.C.J. 登録日 2007-02-06 公開日 2007-02-27 最終更新日 2021-10-20 実験手法 X-RAY DIFFRACTION (2.1 Å) 主引用文献 Structural and Mechanistic Analyses of endo-Glycoceramidase II, a Membrane-associated Family 5 Glycosidase in the Apo and GM3 Ganglioside-bound Forms. J.Biol.Chem., 282, 2007
3SR2	Crystal Structure of Human XLF-XRCC4 Complex 分子名称: DNA repair protein XRCC4, Non-homologous end-joining factor 1 著者 Hammel, M, Classen, S, Tainer, J.A. 登録日 2011-07-06 公開日 2011-07-20 最終更新日 2023-09-13 実験手法 X-RAY DIFFRACTION (3.9708 Å) 主引用文献 XRCC4 Protein Interactions with XRCC4-like Factor (XLF) Create an Extended Grooved Scaffold for DNA Ligation and Double Strand Break Repair. J.Biol.Chem., 286, 2011
3FYI	Catalytic core subunits (I and II) of cytochrome C oxidase from Rhodobacter sphaeroides in the reduced state bound with cyanide 分子名称: CADMIUM ION, CALCIUM ION, COPPER (I) ION, ... 著者 Qin, L, Mills, D.A, Proshlyakov, D.A, Hiser, C, Ferguson-Miller, S. 登録日 2009-01-22 公開日 2009-06-16 最終更新日 2023-09-06 実験手法 X-RAY DIFFRACTION (2.2 Å) 主引用文献 Redox dependent conformational changes in cytochrome c oxidase suggest a gating mechanism for proton uptake. Biochemistry, 48, 2009
3SYC	Crystal structure of the G protein-gated inward rectifier K+ channel GIRK2 (Kir3.2) D228N mutant 分子名称: G protein-activated inward rectifier potassium channel 2, POTASSIUM ION 著者 Whorton, M.R, MacKinnon, R. 登録日 2011-07-16 公開日 2011-10-12 最終更新日 2023-09-13 実験手法 X-RAY DIFFRACTION (3.41 Å) 主引用文献 Crystal Structure of the Mammalian GIRK2 K(+) Channel and Gating Regulation by G Proteins, PIP(2), and Sodium. Cell(Cambridge,Mass.), 147, 2011
2OV1	Crystal structure of apo form of ZnuA with flexible loop deletion 分子名称: Periplasmic binding protein component of an ABC type zinc uptake transporter 著者 Smith, T.J, Wei, B. 登録日 2007-02-12 公開日 2007-07-10 最終更新日 2023-08-30 実験手法 X-RAY DIFFRACTION (2.5 Å) 主引用文献 Possible regulatory role for the histidine-rich loop in the zinc transport protein, ZnuA. Biochemistry, 46, 2007
3SS0	Engineered high-affinity halide-binding protein derived from YFP: fluoride complex 分子名称: Green fluorescent protein 著者 Wang, W, Grimley, J.S, Beese, L.S, Hellinga, H.W. 登録日 2011-07-07 公開日 2012-07-11 最終更新日 2023-11-15 実験手法 X-RAY DIFFRACTION (1.492 Å) 主引用文献 Determination of engineered chloride-binding site structures in fluorescent proteins reveals principles of halide recognition To be Published
3SS8	Crystal structure of NFeoB from S. thermophilus bound to GDP.AlF4- and K+ 分子名称: Ferrous iron uptake transporter protein B, GUANOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, ... 著者 Ash, M.R, Maher, M.J, Guss, J.M, Jormakka, M. 登録日 2011-07-08 公開日 2011-08-24 最終更新日 2023-11-01 実験手法 X-RAY DIFFRACTION (2.51 Å) 主引用文献 The initiation of GTP hydrolysis by the G-domain of FeoB: insights from a transition-state complex structure Plos One, 6, 2011
3SSH	Engineered high-affinity halide-binding protein derived from YFP: chloride complex 分子名称: CHLORIDE ION, Green fluorescent protein 著者 Wang, W, Grimley, J.S, Beese, L.S, Hellinga, H.W. 登録日 2011-07-08 公開日 2012-07-11 最終更新日 2023-11-15 実験手法 X-RAY DIFFRACTION (1.277 Å) 主引用文献 Determination of engineered chloride-binding site structures in fluorescent proteins reveals principles of halide recognition To be Published
2OVE	Crystal Structure of Recombinant Human Complement Protein C8gamma 分子名称: Complement component 8, gamma polypeptide 著者 Chiswell, B, Lovelace, L.L, Brannen, C, Ortlund, E.A, Lebioda, L, Sodetz, J.M. 登録日 2007-02-13 公開日 2007-05-22 最終更新日 2021-10-20 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Structural features of the ligand binding site on human complement protein C8gamma: A member of the lipocalin family Biochim.Biophys.Acta, 1774, 2007
3FQV	Staphylococcus aureus F98Y mutant dihydrofolate reductase complexed with NADPH and 2,4-diamino-5-[3-(3-methoxy-4-phenylphenyl)but-1-ynyl]-6-methylpyrimidine 分子名称: 5-[(3S)-3-(2-methoxybiphenyl-4-yl)but-1-yn-1-yl]-6-methylpyrimidine-2,4-diamine, NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, Trimethoprim-sensitive dihydrofolate reductase 著者 Anderson, A.C, Frey, K.M, Liu, J, Lombardo, M.N. 登録日 2009-01-07 公開日 2009-03-24 最終更新日 2024-04-03 実験手法 X-RAY DIFFRACTION (1.85 Å) 主引用文献 Crystal structures of wild-type and mutant methicillin-resistant Staphylococcus aureus dihydrofolate reductase reveal an alternate conformation of NADPH that may be linked to trimethoprim resistance. J.Mol.Biol., 387, 2009
3SU3	Crystal structure of NS3/4A protease in complex with vaniprevir 分子名称: (5R,7S,10S)-10-tert-butyl-N-{(1R,2R)-1-[(cyclopropylsulfonyl)carbamoyl]-2-ethylcyclopropyl}-15,15-dimethyl-3,9,12-trioxo-6,7,9,10,11,12,14,15,16,17,18,19-dodecahydro-1H,5H-2,23:5,8-dimethano-4,13,2,8,11-benzodioxatriazacyclohenicosine-7(3H)-carboxamide, NS3 protease, NS4A protein, ... 著者 Schiffer, C.A, Romano, K.P. 登録日 2011-07-11 公開日 2012-09-05 最終更新日 2024-02-28 実験手法 X-RAY DIFFRACTION (1.3 Å) 主引用文献 The Molecular Basis of Drug Resistance against Hepatitis C Virus NS3/4A Protease Inhibitors. Plos Pathog., 8, 2012
3SUG	Crystal structure of NS3/4A protease variant A156T in complex with MK-5172 分子名称: (1aR,5S,8S,10R,22aR)-5-tert-butyl-N-{(1R,2S)-1-[(cyclopropylsulfonyl)carbamoyl]-2-ethenylcyclopropyl}-14-methoxy-3,6-di oxo-1,1a,3,4,5,6,9,10,18,19,20,21,22,22a-tetradecahydro-8H-7,10-methanocyclopropa[18,19][1,10,3,6]dioxadiazacyclononadec ino[11,12-b]quinoxaline-8-carboxamide, NS3 protease, NS4A protein, ... 著者 Schiffer, C.A, Romano, K.P. 登録日 2011-07-11 公開日 2012-09-19 最終更新日 2024-02-28 実験手法 X-RAY DIFFRACTION (1.8 Å) 主引用文献 The Molecular Basis of Drug Resistance against Hepatitis C Virus NS3/4A Protease Inhibitors. Plos Pathog., 8, 2012
2OXV	Structure of the A138T promiscuous mutant of the EcoRI restriction endonuclease bound to its cognate recognition site. 分子名称: DNA (5'-D(*TP*CP*GP*CP*GP*AP*AP*TP*TP*CP*GP*CP*G)-3'), Type II restriction enzyme EcoRI 著者 Sapienza, P.J, Rosenberg, J.M, Jen-Jacobson, L. 登録日 2007-02-21 公開日 2007-10-23 最終更新日 2023-08-30 実験手法 X-RAY DIFFRACTION (1.95 Å) 主引用文献 Structural and thermodynamic basis for enhanced DNA binding by a promiscuous mutant EcoRI endonuclease. Structure, 15, 2007

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