Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

4O69
DownloadVisualize
BU of 4o69 by Molmil
Human cyclic GMP-AMP synthase (cGAS) in complex with sulfate ion
分子名称: Cyclic GMP-AMP synthase, SULFATE ION, ZINC ION
著者Zhang, X, Chen, Z, Zhang, X.W, Chen, Z.J.
登録日2013-12-20
公開日2014-02-05
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.252 Å)
主引用文献The Cytosolic DNA Sensor cGAS Forms an Oligomeric Complex with DNA and Undergoes Switch-like Conformational Changes in the Activation Loop.
Cell Rep, 6, 2014
3ETF
DownloadVisualize
BU of 3etf by Molmil
Crystal structure of a putative succinate-semialdehyde dehydrogenase from salmonella typhimurium lt2
分子名称: Putative succinate-semialdehyde dehydrogenase
著者Brunzelle, J.S, Evdokimova, E, Kudritska, M, Wawrzak, Z, Anderson, W.F, Savchenk, A, Center for Structural Genomics of Infectious Diseases (CSGID)
登録日2008-10-07
公開日2008-11-04
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Structure and activity of the NAD(P)(+) -dependent succinate semialdehyde dehydrogenase YneI from Salmonella typhimurium.
Proteins, 81, 2013
4O6A
DownloadVisualize
BU of 4o6a by Molmil
Mouse cyclic GMP-AMP synthase (cGAS) in complex with DNA
分子名称: Cyclic GMP-AMP synthase, DNA1, DNA2, ...
著者Zhang, X, Chen, Z, Zhang, X.W, Chen, Z.J.
登録日2013-12-20
公開日2014-02-05
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.859 Å)
主引用文献The Cytosolic DNA Sensor cGAS Forms an Oligomeric Complex with DNA and Undergoes Switch-like Conformational Changes in the Activation Loop.
Cell Rep, 6, 2014
3ERE
DownloadVisualize
BU of 3ere by Molmil
Crystal structure of the arginine repressor protein from Mycobacterium tuberculosis in complex with the DNA operator
分子名称: 5'-D(*DTP*DTP*DGP*DCP*DAP*DTP*DAP*DAP*DCP*DGP*DAP*DTP*DGP*DCP*DAP*DA)-3', 5'-D(*DTP*DTP*DGP*DCP*DAP*DTP*DCP*DGP*DTP*DTP*DAP*DTP*DGP*DCP*DAP*DA)-3', Arginine repressor, ...
著者Cherney, L.T, Cherney, M.M, Garen, C.R, Lu, G.J, James, M.N, TB Structural Genomics Consortium (TBSGC)
登録日2008-10-01
公開日2008-10-14
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Crystal structure of the arginine repressor protein in complex with the DNA operator from Mycobacterium tuberculosis.
J.Mol.Biol., 384, 2008
6JB7
DownloadVisualize
BU of 6jb7 by Molmil
Crystal structure of Ub-conjugated Ube2K C92K&K97A mutant (isopeptide linkage), 2.1 A resolution
分子名称: Ubiquitin, Ubiquitin-conjugating enzyme E2 K
著者Lee, J.-G, Youn, H.-S, Lee, Y, An, J.Y, Park, K.R, Kang, J.Y, Mun, S.A, Park, J, Park, T, Jin, M.W, Yang, J, Eom, S.H.
登録日2019-01-25
公開日2019-03-20
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Crystal structure of Ub-conjugated Ube2K C92K&K97A mutant (isopeptide linkage), 2.1 A resolution
To Be Published
4ONS
DownloadVisualize
BU of 4ons by Molmil
Structural and thermodynamic characterization of cadherin-beta-catenin-alpha-catenin complex formation
分子名称: Catenin alpha-2, Catenin beta-1
著者Pokutta, S, Choi, H.-J, Ahlsen, G, Hansen, S.D, Weis, W.I.
登録日2014-01-29
公開日2014-04-09
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Structural and Thermodynamic Characterization of Cadherin beta-Catenin alpha-Catenin Complex Formation.
J.Biol.Chem., 289, 2014
5Z67
DownloadVisualize
BU of 5z67 by Molmil
Structure of the recombination mediator protein RecF in RecFOR pathway
分子名称: DNA replication and repair protein RecF
著者Tang, Q, Liu, Y.-P, Yan, X.-X.
登録日2018-01-22
公開日2018-04-18
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献ATP-dependent conformational change in ABC-ATPase RecF serves as a switch in DNA repair.
Sci Rep, 8, 2018
2Q8I
DownloadVisualize
BU of 2q8i by Molmil
Pyruvate dehydrogenase kinase isoform 3 in complex with antitumor drug radicicol
分子名称: DIHYDROLIPOIC ACID, Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex, GLYCEROL, ...
著者Kato, M, Li, J, Chuang, J.L, Chuang, D.T.
登録日2007-06-10
公開日2007-07-24
最終更新日2024-10-16
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Distinct Structural Mechanisms for Inhibition of Pyruvate Dehydrogenase Kinase Isoforms by AZD7545, Dichloroacetate, and Radicicol.
Structure, 15, 2007
7M15
DownloadVisualize
BU of 7m15 by Molmil
crystal structure of cj1430 in the presence of GDP-D-glycero-L-gluco-heptose, a GDP-D-glycero-4-keto-D-lyxo-heptose-3,5-epimerase from campylobacter jejuni
分子名称: 1,2-ETHANEDIOL, GDP-D-glycero-L-gluco-heptose, [(2R,3S,4R,5R)-5-(2-amino-6-oxo-1,6-dihydro-9H-purin-9-yl)-3,4-dihydroxyoxolan-2-yl]methyl (2R,3S,4R,5R,6S)-6-[(1R)-1,2-dihydroxyethyl]-3,4,5-trihydroxyoxan-2-yl dihydrogen diphosphate (non-preferred name)
著者Girardi, N.M, Thoden, J.B, Raushel, F.M, Holden, H.M.
登録日2021-03-12
公開日2021-03-24
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Biosynthesis of d- glycero -l- gluco -Heptose in the Capsular Polysaccharides of Campylobacter jejuni .
Biochemistry, 60, 2021
7M13
DownloadVisualize
BU of 7m13 by Molmil
Crystal structure of CJ1428, a GDP-D-GLYCERO-L-GLUCO-HEPTOSE SYNTHASE from campylobacter jejuni in the presence of NADPH
分子名称: 1,2-ETHANEDIOL, GDP-L-fucose synthase, MAGNESIUM ION, ...
著者Anderson, T.K, Thoden, J.B, Raushel, F.M, Holden, H.M.
登録日2021-03-12
公開日2021-03-24
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Biosynthesis of d- glycero -l- gluco -Heptose in the Capsular Polysaccharides of Campylobacter jejuni .
Biochemistry, 60, 2021
7M14
DownloadVisualize
BU of 7m14 by Molmil
x-ray structure of cj1430 in the presence of GDP, a GDP-D-glycero-4-keto-D-lyxo-heptose-3,5-epimerase from campylobacter jejuni
分子名称: 1,2-ETHANEDIOL, GUANOSINE-5'-DIPHOSPHATE, SODIUM ION, ...
著者Girardi, N.M, Thoden, J.B, Raushel, F.M, Holden, H.M.
登録日2021-03-12
公開日2021-03-24
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Biosynthesis of d- glycero -l- gluco -Heptose in the Capsular Polysaccharides of Campylobacter jejuni .
Biochemistry, 60, 2021
6NVP
DownloadVisualize
BU of 6nvp by Molmil
Crystal structure of Pseudomonas putida nuclease MPE
分子名称: MANGANESE (II) ION, Nuclease MPE
著者Goldgur, Y, Shuman, S, Ejaz, A.
登録日2019-02-05
公開日2019-03-27
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Activity and structure ofPseudomonas putidaMPE, a manganese-dependent single-strand DNA endonuclease encoded in a nucleic acid repair gene cluster.
J.Biol.Chem., 294, 2019
2GA9
DownloadVisualize
BU of 2ga9 by Molmil
Crystal Structure of the Heterodimeric Vaccinia Virus Polyadenylate Polymerase with Bound ATP-gamma-S
分子名称: CALCIUM ION, Cap-specific mRNA (nucleoside-2'-O-)-methyltransferase, PHOSPHOTHIOPHOSPHORIC ACID-ADENYLATE ESTER, ...
著者Moure, C.M, Bowman, B.R, Gershon, P.D, Quiocho, F.A.
登録日2006-03-08
公開日2006-05-16
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Crystal structures of the vaccinia virus polyadenylate polymerase heterodimer: insights into ATP selectivity and processivity.
Mol.Cell, 22, 2006
3G5W
DownloadVisualize
BU of 3g5w by Molmil
Crystal structure of Blue Copper Oxidase from Nitrosomonas europaea
分子名称: COPPER (II) ION, CU-O LINKAGE, CU-O-CU LINKAGE, ...
著者Lawton, T.J, Sayavedra-Soto, L.A, Arp, D.J, Rosenzweig, A.C.
登録日2009-02-05
公開日2009-02-17
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Crystal structure of a two-domain multicopper oxidase: implications for the evolution of multicopper blue proteins.
J.Biol.Chem., 284, 2009
2GB2
DownloadVisualize
BU of 2gb2 by Molmil
The P52G mutant of amicyanin in the Cu(II) state.
分子名称: Amicyanin, COPPER (II) ION
著者Ma, J.K, Carrell, C.J, Mathews, F.S, Davidson, V.L.
登録日2006-03-09
公開日2006-08-01
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (1.25 Å)
主引用文献Site-Directed Mutagenesis of Proline 52 To Glycine in Amicyanin Converts a True Electron Transfer Reaction into One that Is Conformationally Gated.
Biochemistry, 45, 2006
2FU3
DownloadVisualize
BU of 2fu3 by Molmil
Crystal structure of gephyrin E-domain
分子名称: gephyrin
著者Kim, E.Y, Schindelin, H.
登録日2006-01-25
公開日2006-03-14
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Deciphering the structural framework of glycine receptor anchoring by gephyrin.
Embo J., 25, 2006
2Q0F
DownloadVisualize
BU of 2q0f by Molmil
Terminal uridylyl transferase 4 from Trypanosoma brucei with bound UTP and UMP
分子名称: MAGNESIUM ION, RNA uridylyl transferase, URIDINE 5'-TRIPHOSPHATE, ...
著者Stagno, J, Luecke, H.
登録日2007-05-21
公開日2007-08-28
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Dual role of the RNA substrate in selectivity and catalysis by terminal uridylyl transferases.
Proc.Natl.Acad.Sci.Usa, 104, 2007
4L4Z
DownloadVisualize
BU of 4l4z by Molmil
Crystal structures of the LsrR proteins complexed with phospho-AI-2 and its two different analogs reveal distinct mechanisms for ligand recognition
分子名称: (2S)-2,3,3-trihydroxy-4-oxopentyl dihydrogen phosphate, Transcriptional regulator LsrR
著者Ryu, K.S, Ha, J.H, Eo, Y.
登録日2013-06-10
公開日2013-11-06
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Crystal Structures of the LsrR Proteins Complexed with Phospho-AI-2 and Two Signal-Interrupting Analogues Reveal Distinct Mechanisms for Ligand Recognition.
J.Am.Chem.Soc., 135, 2013
3BK6
DownloadVisualize
BU of 3bk6 by Molmil
Crystal structure of a core domain of stomatin from Pyrococcus horikoshii
分子名称: PH stomatin
著者Yokoyama, H, Fujii, S, Matsui, I.
登録日2007-12-05
公開日2008-02-19
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (3.2 Å)
主引用文献Crystal structure of a core domain of stomatin from Pyrococcus horikoshii Illustrates a novel trimeric and coiled-coil fold
J.Mol.Biol., 376, 2008
3BOS
DownloadVisualize
BU of 3bos by Molmil
Crystal structure of a putative dna replication regulator HDA (SAMA_1916) from Shewanella amazonensis sb2b at 1.75 A resolution
分子名称: 1,2-ETHANEDIOL, CHLORIDE ION, CYTIDINE-5'-DIPHOSPHATE, ...
著者Joint Center for Structural Genomics (JCSG)
登録日2007-12-17
公開日2008-01-15
最終更新日2023-01-25
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献A structural basis for the regulatory inactivation of DnaA.
J.Mol.Biol., 385, 2009
2GAF
DownloadVisualize
BU of 2gaf by Molmil
Crystal Structure of the Vaccinia Polyadenylate Polymerase Heterodimer (apo form)
分子名称: Cap-specific mRNA (nucleoside-2'-O-)-methyltransferase, Poly(A) polymerase catalytic subunit
著者Moure, C.M, Bowman, B.R, Gershon, P.D, Quiocho, F.A.
登録日2006-03-08
公開日2006-05-16
最終更新日2024-10-09
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Crystal structures of the vaccinia virus polyadenylate polymerase heterodimer: insights into ATP selectivity and processivity.
Mol.Cell, 22, 2006
2JUL
DownloadVisualize
BU of 2jul by Molmil
NMR Structure of DREAM
分子名称: CALCIUM ION, Calsenilin
著者Ames, J.
登録日2007-08-30
公開日2008-04-22
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献NMR structure of DREAM: Implications for Ca(2+)-dependent DNA binding and protein dimerization.
Biochemistry, 47, 2008
2QJG
DownloadVisualize
BU of 2qjg by Molmil
M. jannaschii ADH synthase complexed with F1,6P
分子名称: 1,6-DI-O-PHOSPHONO-D-ALLITOL, Putative aldolase MJ0400
著者Ealick, S.E, Morar, M.
登録日2007-07-07
公開日2007-10-30
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Structure of 2-amino-3,7-dideoxy-D-threo-hept-6-ulosonic acid synthase, a catalyst in the archaeal pathway for the biosynthesis of aromatic amino acids.
Biochemistry, 46, 2007
7NE6
DownloadVisualize
BU of 7ne6 by Molmil
Human TET2 in complex with unfavourable DNA substrate.
分子名称: 1,2-ETHANEDIOL, 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, DNA (5'-D(*AP*CP*AP*GP*GP*(5CM)P*GP*CP*CP*TP*G)-3'), ...
著者Rafalski, D, Bochtler, M.
登録日2021-02-03
公開日2022-03-02
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Pronounced sequence specificity of the TET enzyme catalytic domain guides its cellular function.
Sci Adv, 8, 2022
5OS9
DownloadVisualize
BU of 5os9 by Molmil
Structure of the B3 DNA-Binding Domain of NGA1
分子名称: B3 domain-containing transcription factor NGA1
著者Sasnauskas, G, Manakova, E.
登録日2017-08-17
公開日2018-09-05
最終更新日2024-05-01
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献DNA recognition by Arabidopsis transcription factors ABI3 and NGA1.
FEBS J., 285, 2018

226262

件を2024-10-16に公開中

PDB statisticsPDBj update infoContact PDBjnumon