Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

2JUL
DownloadVisualize
BU of 2jul by Molmil
NMR Structure of DREAM
分子名称: CALCIUM ION, Calsenilin
著者Ames, J.
登録日2007-08-30
公開日2008-04-22
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献NMR structure of DREAM: Implications for Ca(2+)-dependent DNA binding and protein dimerization.
Biochemistry, 47, 2008
8TDP
DownloadVisualize
BU of 8tdp by Molmil
Time-resolved SFX-XFEL crystal structure of CYP121 bound with cYY reacted with peracetic acid for 200 milliseconds
分子名称: (3S,6S)-3,6-bis(4-hydroxybenzyl)piperazine-2,5-dione, HYDROGEN PEROXIDE, Mycocyclosin synthase, ...
著者Nguyen, R.C, Dasgupta, M, Bhowmick, A, Kern, J.F, Liu, A.
登録日2023-07-04
公開日2023-11-22
最終更新日2023-12-06
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献In Situ Structural Observation of a Substrate- and Peroxide-Bound High-Spin Ferric-Hydroperoxo Intermediate in the P450 Enzyme CYP121.
J.Am.Chem.Soc., 145, 2023
2JVR
DownloadVisualize
BU of 2jvr by Molmil
Segmental Isotope Labeling of Npl3p
分子名称: Nucleolar protein 3
著者Skrisovska, L, Allain, F.H.-T.
登録日2007-09-25
公開日2007-12-18
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献Improved segmental isotope labeling methods for the NMR study of multidomain or large proteins: application to the RRMs of Npl3p and hnRNP L
J.Mol.Biol., 375, 2008
2YT7
DownloadVisualize
BU of 2yt7 by Molmil
Solution structure of the PDZ domain of Amyloid beta A4 precursor protein-binding family A member 3
分子名称: Amyloid beta A4 precursor protein-binding family A member 3
著者Dang, W, Muto, Y, Inoue, M, Kigawa, T, Shirouzu, M, Tarada, T, Seiki, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2007-04-05
公開日2008-04-15
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献Solution structure of the PDZ domain of Amyloid beta A4 precursor protein-binding family A member 3
To be Published
8SPZ
DownloadVisualize
BU of 8spz by Molmil
Crystal structure of Bax core domain BH3-groove dimer - hexameric fraction with dioctanoyl phosphatidylserine
分子名称: Apoptosis regulator BAX, SULFATE ION
著者Cowan, A.D, Colman, P.M, Czabotar, P.E, Miller, M.S.
登録日2023-05-04
公開日2023-12-27
最終更新日2024-06-19
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Sequence differences between BAX and BAK core domains manifest as differences in their interactions with lipids.
Febs J., 291, 2024
8SVK
DownloadVisualize
BU of 8svk by Molmil
Crystal structure of Bax D71N core domain BH3-groove dimer
分子名称: Apoptosis regulator BAX, DI(HYDROXYETHYL)ETHER, SULFATE ION, ...
著者Miller, M.S, Czabotar, P.E, Colman, P.M.
登録日2023-05-16
公開日2023-12-27
最終更新日2024-06-19
実験手法X-RAY DIFFRACTION (2.25 Å)
主引用文献Sequence differences between BAX and BAK core domains manifest as differences in their interactions with lipids.
Febs J., 291, 2024
8SRX
DownloadVisualize
BU of 8srx by Molmil
Crystal structure of BAK-BAX heterodimer with lysoPC
分子名称: 1,2-ETHANEDIOL, Apoptosis regulator BAX, Bcl-2 homologous antagonist/killer, ...
著者Brouwer, J.M, Czabotar, P.E, Colman, P.M, Miller, M.S.
登録日2023-05-07
公開日2023-12-27
最終更新日2024-06-19
実験手法X-RAY DIFFRACTION (2.09 Å)
主引用文献Sequence differences between BAX and BAK core domains manifest as differences in their interactions with lipids.
Febs J., 291, 2024
8SRY
DownloadVisualize
BU of 8sry by Molmil
Crystal structure of BAK-BAX heterodimer with C12E8
分子名称: 2-(2-METHOXYETHOXY)ETHANOL, 3,6,9,12,15,18-HEXAOXAICOSANE-1,20-DIOL, 3,6,9,12,15-PENTAOXATRICOSAN-1-OL, ...
著者Brouwer, J.M, Czabotar, P.E, Colman, P.M, Miller, M.S.
登録日2023-05-08
公開日2023-12-27
最終更新日2024-06-19
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Sequence differences between BAX and BAK core domains manifest as differences in their interactions with lipids.
Febs J., 291, 2024
8T5E
DownloadVisualize
BU of 8t5e by Molmil
De novo design of high-affinity protein binders to bioactive helical peptides
分子名称: Bcl-2-like protein 11, Bim_fulldiff
著者Torres, S.V, Leung, P.J.Y, Bera, A.K, Baker, D, Kang, A.
登録日2023-06-13
公開日2024-01-10
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献De novo design of high-affinity binders of bioactive helical peptides.
Nature, 626, 2024
2JE8
DownloadVisualize
BU of 2je8 by Molmil
Structure of a beta-mannosidase from Bacteroides thetaiotaomicron
分子名称: 2-[3-(2-HYDROXY-1,1-DIHYDROXYMETHYL-ETHYLAMINO)-PROPYLAMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, BETA-MANNOSIDASE, CHLORIDE ION, ...
著者Tailford, L.E, Money, V.A, Smith, N.L, Dumon, C, Davies, G.J, Gilbert, H.J.
登録日2007-01-16
公開日2007-02-06
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Mannose Foraging by Bacteroides Thetaiotaomicron: Structure and Specificity of the Beta-Mannosidase, Btman2A.
J.Biol.Chem., 282, 2007
2JUJ
DownloadVisualize
BU of 2juj by Molmil
Solution Structure of the UBA domain from c-Cbl
分子名称: E3 ubiquitin-protein ligase CBL
著者Zhou, Z.R, Hong, J, Lin, D.H, Hu, H.Y.
登録日2007-08-30
公開日2008-07-15
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献Differential Ubiquitin Binding of the UBA Domains from Human c-Cbl and Cbl-b: NMR Structural and Biochemical Insights.
Protein Sci., 2008
2JV0
DownloadVisualize
BU of 2jv0 by Molmil
SET domain of RIZ1 tumor suppressor (PRDM2)
分子名称: PR domain zinc finger protein 2
著者Briknarova, K.
登録日2007-09-10
公開日2008-01-22
最終更新日2021-10-20
実験手法SOLUTION NMR
主引用文献Structural studies of the SET domain from RIZ1 tumor suppressor
Biochem.Biophys.Res.Commun., 366, 2008
2JY5
DownloadVisualize
BU of 2jy5 by Molmil
NMR structure of Ubiquilin 1 UBA domain
分子名称: Ubiquilin-1
著者Zhang, D, Raasi, S, Fushman, D.
登録日2007-12-06
公開日2008-03-18
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献Affinity makes the difference: nonselective interaction of the UBA domain of Ubiquilin-1 with monomeric ubiquitin and polyubiquitin chains
J.Mol.Biol., 377, 2008
7VOI
DownloadVisualize
BU of 7voi by Molmil
Structure of the human CNOT1(MIF4G)-CNOT6L-CNOT7 complex
分子名称: CCR4-NOT transcription complex subunit 1, CCR4-NOT transcription complex subunit 6-like, CCR4-NOT transcription complex subunit 7
著者Bartlam, M, Zhang, Q.
登録日2021-10-13
公開日2022-06-01
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (4.38 Å)
主引用文献Structure of the human Ccr4-Not nuclease module using X-ray crystallography and electron paramagnetic resonance spectroscopy distance measurements.
Protein Sci., 31, 2022
2IEH
DownloadVisualize
BU of 2ieh by Molmil
Crystal structure of human kinesin Eg5 in complex with (R)-mon97, a new monastrol-based inhibitor that binds as (R)-enantiomer
分子名称: ADENOSINE-5'-DIPHOSPHATE, CHLORIDE ION, Kinesin-like protein KIF11, ...
著者Garcia-Saez, I, Kozielski, F.
登録日2006-09-19
公開日2007-01-23
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Structure of human Eg5 in complex with a new monastrol-based inhibitor bound in the R configuration.
J.Biol.Chem., 282, 2007
8T2L
DownloadVisualize
BU of 8t2l by Molmil
Crystal structure of LC3A in complex with the LIR of NSs4
分子名称: Non-structural protein S,Microtubule-associated proteins 1A/1B light chain 3A chimera
著者Ali, M.G.H, Wahba, H.M, Cyr, N, Omichinski, J.G.
登録日2023-06-06
公開日2024-04-03
実験手法X-RAY DIFFRACTION (2.24 Å)
主引用文献An LIR motif in the Rift Valley fever virus NSs protein is critical for the interaction with LC3 family members and inhibition of autophagy.
Plos Pathog., 20, 2024
2ZAJ
DownloadVisualize
BU of 2zaj by Molmil
Solution structure of the short-isoform of the second WW domain from the human membrane-associated guanylate kinase, WW and PDZ domain-containing protein 1 (MAGI-1)
分子名称: Membrane-associated guanylate kinase, WW and PDZ domain-containing protein 1
著者Ohnishi, S, Tochio, N, Tomizawa, T, Koshiba, S, Harada, T, Watanabe, S, Kigawa, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2007-10-05
公開日2008-04-15
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献Solution structure of the short-isoform of the second WW domain from the human membrane-associated guanylate kinase, WW and PDZ domain-containing protein 1 (MAGI-1)
To be Published
8SUV
DownloadVisualize
BU of 8suv by Molmil
CHIP-TPR in complex with the C-terminus of CHIC2
分子名称: Cysteine-rich hydrophobic domain-containing protein 2, E3 ubiquitin-protein ligase CHIP, SULFATE ION
著者Cupo, A.R, McDermott, L.E, DeSilva, A.R, Callahan, M, Nix, J.C, Gestwicki, J.E, Page, R.C.
登録日2023-05-13
公開日2024-03-20
実験手法X-RAY DIFFRACTION (1.63 Å)
主引用文献Interaction with the membrane-anchored protein CHIC2 constrains the ubiquitin ligase activity of CHIP
Biorxiv, 2023
8T76
DownloadVisualize
BU of 8t76 by Molmil
SpRY-Cas9:gRNA complex targeting TAC PAM DNA with 3 bp R-loop
分子名称: CRISPR-associated endonuclease Cas9/Csn1, NTS, TS, ...
著者Hibshman, G.N, Bravo, J.P.K, Taylor, D.W.
登録日2023-06-19
公開日2024-05-01
最終更新日2024-05-15
実験手法ELECTRON MICROSCOPY (3.42 Å)
主引用文献Unraveling the mechanisms of PAMless DNA interrogation by SpRY-Cas9.
Nat Commun, 15, 2024
4LYR
DownloadVisualize
BU of 4lyr by Molmil
Glycoside Hydrolase Family 5 Mannosidase from Rhizomucor miehei, E301A mutant
分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, Exo-beta-1,4-mannosidase
著者Jiang, Z.Q, Zhou, P, Yang, S.Q, Liu, Y, Yan, Q.J.
登録日2013-07-31
公開日2014-08-06
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Structural insights into the substrate specificity and transglycosylation activity of a fungal glycoside hydrolase family 5 beta-mannosidase.
Acta Crystallogr.,Sect.D, 70, 2014
8T6P
DownloadVisualize
BU of 8t6p by Molmil
SpRY-Cas9:gRNA complex targeting TAC PAM DNA with 2 bp R-loop
分子名称: CRISPR-associated endonuclease Cas9/Csn1, NTS, TS, ...
著者Hibshman, G.N, Bravo, J.P.K, Taylor, D.W.
登録日2023-06-16
公開日2024-05-01
最終更新日2024-05-15
実験手法ELECTRON MICROSCOPY (3.15 Å)
主引用文献Unraveling the mechanisms of PAMless DNA interrogation by SpRY-Cas9.
Nat Commun, 15, 2024
8SPQ
DownloadVisualize
BU of 8spq by Molmil
SpRY-Cas9:gRNA complex targeting TGG PAM DNA
分子名称: CRISPR-associated endonuclease Cas9/Csn1, MAGNESIUM ION, NTS, ...
著者Hibshman, G.N, Bravo, J.P.K, Taylor, D.W.
登録日2023-05-03
公開日2024-05-01
最終更新日2024-05-15
実験手法ELECTRON MICROSCOPY (3.26 Å)
主引用文献Unraveling the mechanisms of PAMless DNA interrogation by SpRY-Cas9.
Nat Commun, 15, 2024
8T6Y
DownloadVisualize
BU of 8t6y by Molmil
SpRY-Cas9:gRNA complex bound to non-target DNA with 1 bp R-loop
分子名称: CRISPR-associated endonuclease Cas9/Csn1, NTS, TS, ...
著者Hibshman, G.N, Bravo, J.P.K, Taylor, D.W.
登録日2023-06-19
公開日2024-05-01
最終更新日2024-05-15
実験手法ELECTRON MICROSCOPY (2.88 Å)
主引用文献Unraveling the mechanisms of PAMless DNA interrogation by SpRY-Cas9.
Nat Commun, 15, 2024
8T7S
DownloadVisualize
BU of 8t7s by Molmil
SpRYmer bound to NAC PAM DNA
分子名称: CRISPR-associated endonuclease Cas9/Csn1, MAGNESIUM ION, NTS, ...
著者Hibshman, G.N, Bravo, J.P.K, Taylor, D.W.
登録日2023-06-21
公開日2024-05-01
最終更新日2024-05-15
実験手法ELECTRON MICROSCOPY (3.01 Å)
主引用文献Unraveling the mechanisms of PAMless DNA interrogation by SpRY-Cas9.
Nat Commun, 15, 2024
2JVO
DownloadVisualize
BU of 2jvo by Molmil
Segmental isotope labeling of Npl3
分子名称: Nucleolar protein 3
著者Skrisovska, L, Allain, F.H.-T.
登録日2007-09-24
公開日2007-12-18
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献Improved segmental isotope labeling methods for the NMR study of multidomain or large proteins: application to the RRMs of Npl3p and hnRNP L
J.Mol.Biol., 375, 2008

222415

件を2024-07-10に公開中

PDB statisticsPDBj update infoContact PDBjnumon