PDB: 1980 件ウェブページステータス検索Chemie searchBIRD

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3S16	RNA Polymerase II Initiation Complex with an 8-nt RNA 分子名称: DNA (5'-D(*CP*TP*AP*CP*CP*GP*AP*TP*AP*AP*GP*CP*AP*GP*AP*CP*GP*AP*TP*CP*CP*TP*CP*TP*CP*GP*AP*TP*G)-3'), DNA-directed RNA polymerase II subunit RPB1, DNA-directed RNA polymerase II subunit RPB11, ... 著者 Liu, X, Bushnell, D.A, Silva, D.A, Huang, X, Kornberg, R.D. 登録日 2011-05-14 公開日 2011-08-10 最終更新日 2023-09-13 実験手法 X-RAY DIFFRACTION (3.241 Å) 主引用文献 Initiation complex structure and promoter proofreading. Science, 333, 2011
3S14	RNA Polymerase II Initiation Complex with a 6-nt RNA 分子名称: DNA (5'-D(*CP*TP*AP*CP*CP*GP*AP*TP*AP*AP*GP*CP*AP*GP*AP*CP*GP*AP*TP*CP*CP*TP*CP*TP*CP*GP*AP*TP*G)-3'), DNA-directed RNA polymerase II subunit RPB1, DNA-directed RNA polymerase II subunit RPB11, ... 著者 Liu, X, Bushnell, D.A, Silva, D.A, Huang, X, Kornberg, R.D. 登録日 2011-05-14 公開日 2011-08-10 最終更新日 2023-09-13 実験手法 X-RAY DIFFRACTION (2.85 Å) 主引用文献 Initiation complex structure and promoter proofreading. Science, 333, 2011
3S1N	RNA Polymerase II Initiation Complex with a 5-nt RNA (variant 2) 分子名称: DNA (5'-D(*CP*TP*AP*CP*CP*GP*AP*TP*AP*AP*GP*CP*AP*GP*AP*CP*GP*AP*TP*GP*CP*TP*CP*TP*CP*GP*AP*TP*G)-3'), DNA-directed RNA polymerase II subunit RPB1, DNA-directed RNA polymerase II subunit RPB11, ... 著者 Liu, X, Bushnell, D.A, Silva, D.A, Huang, X, Kornberg, R.D. 登録日 2011-05-15 公開日 2011-08-10 最終更新日 2023-09-13 実験手法 X-RAY DIFFRACTION (3.1 Å) 主引用文献 Initiation complex structure and promoter proofreading. Science, 333, 2011
3S2D	RNA Polymerase II Initiation Complex with a 5-nt RNA containing a 5Br-U 分子名称: DNA (5'-D(*CP*TP*AP*CP*CP*GP*AP*TP*AP*AP*GP*CP*AP*GP*AP*CP*GP*AP*TP*CP*AP*CP*CP*TP*CP*GP*AP*TP*G)-3'), DNA-directed RNA polymerase II subunit RPB1, DNA-directed RNA polymerase II subunit RPB11, ... 著者 Liu, X, Bushnell, D.A, Silva, D.A, Huang, X, Kornberg, R.D. 登録日 2011-05-16 公開日 2011-08-10 最終更新日 2023-09-13 実験手法 X-RAY DIFFRACTION (3.2 Å) 主引用文献 Initiation complex structure and promoter proofreading. Science, 333, 2011
3S1Q	RNA Polymerase II Initiation Complex with a 5-nt 3'-deoxy RNA soaked with ATP 分子名称: ADENOSINE-5'-TRIPHOSPHATE, DNA (5'-D(*CP*TP*AP*CP*CP*GP*AP*TP*AP*AP*GP*CP*AP*GP*AP*CP*GP*AP*TP*CP*CP*TP*CP*TP*CP*GP*AP*TP*G)-3'), DNA-directed RNA polymerase II subunit RPB1, ... 著者 Liu, X, Bushnell, D.A, Silva, D.A, Huang, X, Kornberg, R.D. 登録日 2011-05-16 公開日 2011-08-10 最終更新日 2024-02-28 実験手法 X-RAY DIFFRACTION (3.3 Å) 主引用文献 Initiation complex structure and promoter proofreading. Science, 333, 2011
3S15	RNA Polymerase II Initiation Complex with a 7-nt RNA 分子名称: DNA (5'-D(*CP*TP*AP*CP*CP*GP*AP*TP*AP*AP*GP*CP*AP*GP*AP*CP*GP*AP*TP*CP*CP*TP*CP*TP*CP*GP*AP*TP*G)-3'), DNA-directed RNA polymerase II subunit RPB1, DNA-directed RNA polymerase II subunit RPB11, ... 著者 Liu, X, Bushnell, D.A, Silva, D.A, Huang, X, Kornberg, R.D. 登録日 2011-05-14 公開日 2011-08-10 最終更新日 2023-09-13 実験手法 X-RAY DIFFRACTION (3.3 Å) 主引用文献 Initiation complex structure and promoter proofreading. Science, 333, 2011
3S2H	RNA Polymerase II Initiation Complex with a 6-nt RNA containing a 2[prime]-iodo ATP 分子名称: DNA (5'-D(*CP*TP*AP*CP*CP*GP*AP*TP*AP*AP*GP*CP*AP*GP*AP*CP*GP*AP*TP*CP*CP*TP*CP*TP*CP*GP*AP*TP*G)-3'), DNA-directed RNA polymerase II subunit RPB1, DNA-directed RNA polymerase II subunit RPB11, ... 著者 Liu, X, Bushnell, D.A, Silva, D.A, Huang, X, Kornberg, R.D. 登録日 2011-05-16 公開日 2011-08-17 最終更新日 2023-09-13 実験手法 X-RAY DIFFRACTION (3.3 Å) 主引用文献 Initiation complex structure and promoter proofreading. Science, 333, 2011
3S17	RNA Polymerase II Initiation Complex with a 9-nt RNA 分子名称: DNA (5'-D(*CP*TP*AP*CP*CP*GP*AP*TP*AP*AP*GP*CP*AP*GP*AP*CP*GP*AP*TP*CP*CP*TP*CP*TP*CP*GP*AP*TP*G)-3'), DNA-directed RNA polymerase II subunit RPB1, DNA-directed RNA polymerase II subunit RPB11, ... 著者 Liu, X, Bushnell, D.A, Silva, D.A, Huang, X, Kornberg, R.D. 登録日 2011-05-14 公開日 2011-08-10 最終更新日 2024-02-28 実験手法 X-RAY DIFFRACTION (3.2 Å) 主引用文献 Initiation complex structure and promoter proofreading. Science, 333, 2011
3KNA	M296I mutant of foot-and-mouth disease virus RNA-polymerase in complex with a template- primer RNA 分子名称: 3D polymerase, MAGNESIUM ION, RNA (5'-R(*AP*UP*GP*GP*GP*CP*C)-3'), ... 著者 Ferrer-Orta, C, Verdaguer, N, Perez-Luque, R. 登録日 2009-11-12 公開日 2010-07-07 最終更新日 2023-11-01 実験手法 X-RAY DIFFRACTION (2.8 Å) 主引用文献 Structure of foot-and-mouth disease virus mutant polymerases with reduced sensitivity to ribavirin J.Virol., 84, 2010
6RQT	RNA Polymerase I-tWH-Rrn3-DNA 分子名称: DNA-directed RNA polymerase I subunit RPA12, DNA-directed RNA polymerase I subunit RPA135, DNA-directed RNA polymerase I subunit RPA14, ... 著者 Mueller, C.W, Sadian, Y, Tafur, L. 登録日 2019-05-16 公開日 2019-12-11 最終更新日 2024-05-22 実験手法 ELECTRON MICROSCOPY (4 Å) 主引用文献 Molecular insight into RNA polymerase I promoter recognition and promoter melting. Nat Commun, 10, 2019
6RUI	RNA Polymerase I Pre-initiation complex DNA opening intermediate 2 分子名称: DNA-directed RNA polymerase I subunit RPA12, DNA-directed RNA polymerase I subunit RPA135, DNA-directed RNA polymerase I subunit RPA14, ... 著者 Mueller, C.W, Sadian, Y, Tafur, L. 登録日 2019-05-28 公開日 2019-12-11 最終更新日 2024-05-22 実験手法 ELECTRON MICROSCOPY (2.7 Å) 主引用文献 Molecular insight into RNA polymerase I promoter recognition and promoter melting. Nat Commun, 10, 2019
6RQL	RNA Polymerase I Closed Conformation 2 (CC2) 分子名称: DNA-directed RNA polymerase I subunit RPA12, DNA-directed RNA polymerase I subunit RPA135, DNA-directed RNA polymerase I subunit RPA14, ... 著者 Mueller, C.W, Sadian, Y, Tafur, L. 登録日 2019-05-16 公開日 2019-12-11 最終更新日 2024-05-22 実験手法 ELECTRON MICROSCOPY (2.9 Å) 主引用文献 Molecular insight into RNA polymerase I promoter recognition and promoter melting. Nat Commun, 10, 2019
3KMQ	G62S mutant of foot-and-mouth disease virus RNA-polymerase in complex with a template- primer RNA, tetragonal structure 分子名称: 3D polymerase, RNA (5'-R(*GP*GP*CP*CP*C)-3'), RNA (5'-R(P*GP*GP*GP*CP*C)-3') 著者 Ferrer-Orta, C, Verdaguer, N, Perez-Luque, R. 登録日 2009-11-11 公開日 2010-07-07 最終更新日 2023-11-01 実験手法 X-RAY DIFFRACTION (2.11 Å) 主引用文献 Structure of foot-and-mouth disease virus mutant polymerases with reduced sensitivity to ribavirin J.Virol., 84, 2010
6RUO	RNA Polymerase I Open Complex conformation 1 分子名称: DNA-directed RNA polymerase I subunit RPA12, DNA-directed RNA polymerase I subunit RPA135, DNA-directed RNA polymerase I subunit RPA14, ... 著者 Mueller, C.W, Sadian, Y, Tafur, L. 登録日 2019-05-28 公開日 2019-12-11 最終更新日 2024-05-22 実験手法 ELECTRON MICROSCOPY (3.5 Å) 主引用文献 Molecular insight into RNA polymerase I promoter recognition and promoter melting. Nat Commun, 10, 2019
6RRD	RNA Polymerase I Pre-initiation complex DNA opening intermediate 1 分子名称: DNA-directed RNA polymerase I subunit RPA12, DNA-directed RNA polymerase I subunit RPA135, DNA-directed RNA polymerase I subunit RPA14, ... 著者 Mueller, C.W, Sadian, Y, Tafur, L. 登録日 2019-05-17 公開日 2019-12-11 最終更新日 2024-05-22 実験手法 ELECTRON MICROSCOPY (3.1 Å) 主引用文献 Molecular insight into RNA polymerase I promoter recognition and promoter melting. Nat Commun, 10, 2019
3KOA	M296I mutant of foot-and-mouth disease virus RNA-polymerase in complex with a template- primer RNA and GTP 分子名称: 3D polymerase, DIPHOSPHATE, MAGNESIUM ION, ... 著者 Ferrer-Orta, C, Verdaguer, N, Perez-Luque, R. 登録日 2009-11-13 公開日 2010-07-07 最終更新日 2023-11-01 実験手法 X-RAY DIFFRACTION (2.4 Å) 主引用文献 Structure of foot-and-mouth disease virus mutant polymerases with reduced sensitivity to ribavirin J.Virol., 84, 2010
6RWE	RNA Polymerase I Open Complex conformation 2 分子名称: DNA-directed RNA polymerase I subunit RPA12, DNA-directed RNA polymerase I subunit RPA135, DNA-directed RNA polymerase I subunit RPA14, ... 著者 Mueller, C.W, Sadian, Y, Tafur, L. 登録日 2019-06-04 公開日 2019-12-11 最終更新日 2024-05-22 実験手法 ELECTRON MICROSCOPY (3 Å) 主引用文献 Molecular insight into RNA polymerase I promoter recognition and promoter melting. Nat Commun, 10, 2019
3KMS	G62S mutant of foot-and-mouth disease virus RNA-polymerase in complex with a template- primer RNA trigonal structure 分子名称: 3D polymerase, MAGNESIUM ION, RNA (5'-R(*AP*UP*GP*GP*GP*CP*C)-3'), ... 著者 Ferrer-Orta, C, Verdaguer, N, Perez-Luque, R. 登録日 2009-11-11 公開日 2010-07-07 最終更新日 2024-03-20 実験手法 X-RAY DIFFRACTION (2.2 Å) 主引用文献 Structure of foot-and-mouth disease virus mutant polymerases with reduced sensitivity to ribavirin J.Virol., 84, 2010
8WAY	De novo transcribing complex 15 (TC15), the early elongation complex with Pol II positioned 15nt downstream of TSS 分子名称: Alpha-amanitin, DNA-directed RNA polymerase II subunit E, DNA-directed RNA polymerase II subunit F, ... 著者 Chen, X, Liu, W, Wang, Q, Wang, X, Ren, Y, Qu, X, Li, W, Xu, Y. 登録日 2023-09-08 公開日 2023-12-06 最終更新日 2024-01-03 実験手法 ELECTRON MICROSCOPY (2.85 Å) 主引用文献 Structural visualization of transcription initiation in action. Science, 382, 2023
8WAT	De novo transcribing complex 10 (TC10), the early elongation complex with Pol II positioned 10nt downstream of TSS 分子名称: Alpha-amanitin, DNA-directed RNA polymerase II subunit E, DNA-directed RNA polymerase II subunit F, ... 著者 Chen, X, Liu, W, Wang, Q, Wang, X, Ren, Y, Qu, X, Li, W, Xu, Y. 登録日 2023-09-08 公開日 2023-12-06 最終更新日 2024-01-03 実験手法 ELECTRON MICROSCOPY (2.82 Å) 主引用文献 Structural visualization of transcription initiation in action. Science, 382, 2023
8WB0	De novo transcribing complex 17 (TC17), the early elongation complex with Pol II positioned 17nt downstream of TSS 分子名称: Alpha-amanitin, DNA-directed RNA polymerase II subunit E, DNA-directed RNA polymerase II subunit F, ... 著者 Chen, X, Liu, W, Wang, Q, Wang, X, Ren, Y, Qu, X, Li, W, Xu, Y. 登録日 2023-09-08 公開日 2023-12-06 最終更新日 2024-01-03 実験手法 ELECTRON MICROSCOPY (2.94 Å) 主引用文献 Structural visualization of transcription initiation in action. Science, 382, 2023
8WAU	De novo transcribing complex 11 (TC11), the early elongation complex with Pol II positioned 11nt downstream of TSS 分子名称: Alpha-amanitin, DNA-directed RNA polymerase II subunit E, DNA-directed RNA polymerase II subunit F, ... 著者 Chen, X, Liu, W, Wang, Q, Wang, X, Ren, Y, Qu, X, Li, W, Xu, Y. 登録日 2023-09-08 公開日 2023-12-06 最終更新日 2024-01-03 実験手法 ELECTRON MICROSCOPY (2.78 Å) 主引用文献 Structural visualization of transcription initiation in action. Science, 382, 2023
3PO3	Arrested RNA Polymerase II reactivation intermediate 分子名称: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, ACETATE ION, DNA non-template strand, ... 著者 Cheung, A.C.M, Cramer, P. 登録日 2010-11-21 公開日 2011-03-02 最終更新日 2023-09-06 実験手法 X-RAY DIFFRACTION (3.3 Å) 主引用文献 Structural basis of RNA polymerase II backtracking, arrest and reactivation. Nature, 471, 2011
3QT1	RNA polymerase II variant containing A Chimeric RPB9-C11 subunit 分子名称: DNA-directed RNA polymerase II subunit RPB1, DNA-directed RNA polymerase II subunit RPB11, DNA-directed RNA polymerase II subunit RPB2, ... 著者 Ruan, W, Lehmann, E, Thomm, M, Kostrewa, D, Cramer, P. 登録日 2011-02-22 公開日 2011-03-23 最終更新日 2017-08-23 実験手法 X-RAY DIFFRACTION (4.3 Å) 主引用文献 Evolution of two modes of intrinsic RNA polymerase transcript cleavage. J.Biol.Chem., 286, 2011
8WAV	De novo transcribing complex 12 (TC12), the early elongation complex with Pol II positioned 12nt downstream of TSS 分子名称: Alpha-amanitin, DNA-directed RNA polymerase II subunit E, DNA-directed RNA polymerase II subunit F, ... 著者 Chen, X, Liu, W, Wang, Q, Wang, X, Ren, Y, Qu, X, Li, W, Xu, Y. 登録日 2023-09-08 公開日 2023-12-06 最終更新日 2024-01-03 実験手法 ELECTRON MICROSCOPY (2.72 Å) 主引用文献 Structural visualization of transcription initiation in action. Science, 382, 2023

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