PDB: 166 件ウェブページステータス検索Chemie searchBIRD

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7XXD	Orf1-sarcosine complex 分子名称: FLAVIN-ADENINE DINUCLEOTIDE, N-formimidoyl fortimicin A synthase, SARCOSINE 著者 Wang, Y.L, Li, T.L. 登録日 2022-05-29 公開日 2023-05-31 最終更新日 2023-11-29 実験手法 X-RAY DIFFRACTION (1.982 Å) 主引用文献 N-Formimidoylation/-iminoacetylation modification in aminoglycosides requires FAD-dependent and ligand-protein NOS bridge dual chemistry. Nat Commun, 14, 2023
7XXM	Orf1-glycine-4-aminobutylthricin complex 分子名称: FLAVIN-ADENINE DINUCLEOTIDE, GLYCINE, N-formimidoyl fortimicin A synthase, ... 著者 Wang, Y.L, Li, T.L. 登録日 2022-05-30 公開日 2023-05-31 最終更新日 2023-11-29 実験手法 X-RAY DIFFRACTION (2.119 Å) 主引用文献 N-Formimidoylation/-iminoacetylation modification in aminoglycosides requires FAD-dependent and ligand-protein NOS bridge dual chemistry. Nat Commun, 14, 2023
7XXC	Orf1-glycine-glycylthricin complex 分子名称: FLAVIN-ADENINE DINUCLEOTIDE, GLYCINE, N-formimidoyl fortimicin A synthase, ... 著者 Wang, Y.L, Li, T.L. 登録日 2022-05-29 公開日 2023-05-31 最終更新日 2023-11-29 実験手法 X-RAY DIFFRACTION (1.989 Å) 主引用文献 N-Formimidoylation/-iminoacetylation modification in aminoglycosides requires FAD-dependent and ligand-protein NOS bridge dual chemistry. Nat Commun, 14, 2023
7XXP	F316A-glycine-streptothricin F complex 分子名称: FLAVIN-ADENINE DINUCLEOTIDE, GLYCINE, N-formimidoyl fortimicin A synthase, ... 著者 Wang, Y.L, Li, T.L. 登録日 2022-05-30 公開日 2023-05-31 最終更新日 2023-11-29 実験手法 X-RAY DIFFRACTION (2.052 Å) 主引用文献 N-Formimidoylation/-iminoacetylation modification in aminoglycosides requires FAD-dependent and ligand-protein NOS bridge dual chemistry. Nat Commun, 14, 2023
7XYL	E426Q-glycine-glycylthricin complex 分子名称: FLAVIN-ADENINE DINUCLEOTIDE, GLYCINE, N-formimidoyl fortimicin A synthase, ... 著者 Wang, Y.L, Li, T.L. 登録日 2022-06-01 公開日 2023-05-31 最終更新日 2023-11-29 実験手法 X-RAY DIFFRACTION (2.099 Å) 主引用文献 N-Formimidoylation/-iminoacetylation modification in aminoglycosides requires FAD-dependent and ligand-protein NOS bridge dual chemistry. Nat Commun, 14, 2023
7Y0X	Orf1-glycine complex 分子名称: FLAVIN-ADENINE DINUCLEOTIDE, GLYCINE, N-formimidoyl fortimicin A synthase, ... 著者 Wang, Y.L, Li, T.L. 登録日 2022-06-06 公開日 2023-05-31 最終更新日 2023-11-29 実験手法 X-RAY DIFFRACTION (2.05 Å) 主引用文献 N-Formimidoylation/-iminoacetylation modification in aminoglycosides requires FAD-dependent and ligand-protein NOS bridge dual chemistry. Nat Commun, 14, 2023
7XXR	Orf1 R342A-glycylthricin complex 分子名称: FLAVIN-ADENINE DINUCLEOTIDE, N-formimidoyl fortimicin A synthase, [(2~{R},3~{R},4~{S},5~{R},6~{R})-6-[(~{E})-[(3~{a}~{S},7~{R},7~{a}~{S})-7-oxidanyl-4-oxidanylidene-3,3~{a},5,6,7,7~{a}-hexahydro-1~{H}-imidazo[4,5-c]pyridin-2-ylidene]amino]-5-(2-azanylethanoylamino)-2-(hydroxymethyl)-4-oxidanyl-oxan-3-yl] carbamate 著者 Wang, Y.L, Li, T.L. 登録日 2022-05-30 公開日 2023-05-31 最終更新日 2023-11-29 実験手法 X-RAY DIFFRACTION (2.4 Å) 主引用文献 N-Formimidoylation/-iminoacetylation modification in aminoglycosides requires FAD-dependent and ligand-protein NOS bridge dual chemistry. Nat Commun, 14, 2023
3ATQ	Geranylgeranyl Reductase (GGR) from Sulfolobus acidocaldarius 分子名称: Conserved Archaeal protein, DIHYDROFLAVINE-ADENINE DINUCLEOTIDE, TETRADECANE 著者 Sasaki, D, Fujihashi, M, Murakami, M, Yoshimura, T, Hemmi, H, Miki, K. 登録日 2011-01-12 公開日 2011-05-04 最終更新日 2023-11-01 実験手法 X-RAY DIFFRACTION (1.85 Å) 主引用文献 Structure and mutation analysis of archaeal geranylgeranyl reductase J.Mol.Biol., 409, 2011
3ATR	Geranylgeranyl Reductase (GGR) from Sulfolobus acidocaldarius co-crystallized with its ligand 分子名称: Conserved Archaeal protein, DIHYDROFLAVINE-ADENINE DINUCLEOTIDE, PYROPHOSPHATE, ... 著者 Fujihashi, M, Sasaki, D, Iwata, Y, Yoshimura, T, Hemmi, H, Miki, K. 登録日 2011-01-12 公開日 2011-05-04 最終更新日 2013-12-25 実験手法 X-RAY DIFFRACTION (1.8 Å) 主引用文献 Structure and mutation analysis of archaeal geranylgeranyl reductase J.Mol.Biol., 409, 2011
3BHF	Crystal structure of R49K mutant of Monomeric Sarcosine Oxidase crystallized in PEG as precipitant 分子名称: CHLORIDE ION, FLAVIN-ADENINE DINUCLEOTIDE, Monomeric sarcosine oxidase 著者 Hassan-Abdallah, A, Zhao, G, Chen, Z, Mathews, F.S, Jorns, M.S. 登録日 2007-11-28 公開日 2008-02-26 最終更新日 2023-08-30 実験手法 X-RAY DIFFRACTION (2.1 Å) 主引用文献 Arginine 49 is a bifunctional residue important in catalysis and biosynthesis of monomeric sarcosine oxidase: a context-sensitive model for the electrostatic impact of arginine to lysine mutations. Biochemistry, 47, 2008
3AXB	Structure of a dye-linked L-proline dehydrogenase from the aerobic hyperthermophilic archaeon, Aeropyrum pernix 分子名称: 1,2-ETHANEDIOL, FLAVIN-ADENINE DINUCLEOTIDE, PROLINE, ... 著者 Sakuraba, H, Ohshima, T, Satomura, T, Yoneda, K, Hara, Y. 登録日 2011-04-01 公開日 2012-04-04 最終更新日 2017-10-11 実験手法 X-RAY DIFFRACTION (1.92 Å) 主引用文献 Crystal Structure of Novel Dye-linked L-Proline Dehydrogenase from Hyperthermophilic Archaeon Aeropyrum pernix J.Biol.Chem., 287, 2012
3BHK	Crystal structure of R49K mutant of monomeric sarcosine oxidase crystallized in phosphate as precipitant 分子名称: CHLORIDE ION, FLAVIN-ADENINE DINUCLEOTIDE, GLYCEROL, ... 著者 Hassan-Abdallah, A, Zhao, G, Chen, Z, Mathews, F.S, Jorns, M.S. 登録日 2007-11-28 公開日 2008-02-26 最終更新日 2023-08-30 実験手法 X-RAY DIFFRACTION (1.71 Å) 主引用文献 Arginine 49 is a bifunctional residue important in catalysis and biosynthesis of monomeric sarcosine oxidase: a context-sensitive model for the electrostatic impact of arginine to lysine mutations. Biochemistry, 47, 2008
4OPT	Constructing tailored isoprenoid products by structure-guided modification of geranylgeranyl reductase 分子名称: Conserved Archaeal protein, DIHYDROFLAVINE-ADENINE DINUCLEOTIDE, GERANYLGERANYL DIPHOSPHATE, ... 著者 McAndrew, R.P, Kung, Y, Xie, X, Liu, C, Pereira, J.H, Keasling, J.D, Adams, P.D. 登録日 2014-02-06 公開日 2014-07-09 最終更新日 2014-07-23 実験手法 X-RAY DIFFRACTION (2.6 Å) 主引用文献 Constructing tailored isoprenoid products by structure-guided modification of geranylgeranyl reductase. Structure, 22, 2014
4OPI	Constructing tailored isoprenoid products by structure-guided modification of geranylgeranyl reductase. 分子名称: Conserved Archaeal protein, DIHYDROFLAVINE-ADENINE DINUCLEOTIDE, GERANYLGERANYL DIPHOSPHATE 著者 McAndrew, R.P, Kung, Y, Xie, X, Liu, C, Pereira, J.H, Keasling, J.D, Adams, P.D. 登録日 2014-02-05 公開日 2014-07-09 最終更新日 2014-07-23 実験手法 X-RAY DIFFRACTION (2.24 Å) 主引用文献 Constructing tailored isoprenoid products by structure-guided modification of geranylgeranyl reductase. Structure, 22, 2014
4OPL	Constructing tailored isoprenoid products by structure-guided modification of geranylgeranyl reductase. 分子名称: Conserved Archaeal protein, DIHYDROFLAVINE-ADENINE DINUCLEOTIDE 著者 McAndrew, R.P, Kung, Y, Xie, X, Liu, C, Pereira, J.H, Keasling, J.D, Adams, P.D. 登録日 2014-02-05 公開日 2014-07-09 最終更新日 2014-07-23 実験手法 X-RAY DIFFRACTION (2.51 Å) 主引用文献 Constructing tailored isoprenoid products by structure-guided modification of geranylgeranyl reductase. Structure, 22, 2014
4QFC	Co-crystal structure of compound 3 (4-hydroxy-6-[2-(7-hydroxy-2-oxo-4-phenyl-2h-chromen-6-yl)ethyl]pyridazin-3(2h)-one) and FAD bound to human DAAO at 2.4A 分子名称: 4-hydroxy-6-[2-(7-hydroxy-2-oxo-4-phenyl-2H-chromen-6-yl)ethyl]pyridazin-3(2H)-one, D-amino-acid oxidase, FLAVIN-ADENINE DINUCLEOTIDE, ... 著者 Lukacs, C.M, Chun, L. 登録日 2014-05-20 公開日 2014-07-16 最終更新日 2023-09-20 実験手法 X-RAY DIFFRACTION (2.4 Å) 主引用文献 Novel human D-amino acid oxidase inhibitors stabilize an active-site lid-open conformation. Biosci.Rep., 34, 2014
4OPD	Constructing tailored isoprenoid products by structure-guided modification of geranylgeranyl reductase. 分子名称: Conserved Archaeal protein, DIHYDROFLAVINE-ADENINE DINUCLEOTIDE, GERANYLGERANYL DIPHOSPHATE 著者 McAndrew, R.P, Kung, Y, Xie, X, Liu, C, Pereira, J.H, Keasling, J.D, Adams, P.D. 登録日 2014-02-05 公開日 2014-07-09 最終更新日 2014-07-23 実験手法 X-RAY DIFFRACTION (1.81 Å) 主引用文献 Constructing tailored isoprenoid products by structure-guided modification of geranylgeranyl reductase. Structure, 22, 2014
4OPU	Constructing tailored isoprenoid products by structure-guided modification of geranylgeranyl reductase 分子名称: Conserved Archaeal protein, DIHYDROFLAVINE-ADENINE DINUCLEOTIDE, GERANYLGERANYL DIPHOSPHATE 著者 McAndrew, R.P, Kung, Y, Xie, X, Liu, C, Pereira, J.H, Keasling, J.D, Adams, P.D. 登録日 2014-02-06 公開日 2014-07-09 最終更新日 2014-07-23 実験手法 X-RAY DIFFRACTION (2.7 Å) 主引用文献 Constructing tailored isoprenoid products by structure-guided modification of geranylgeranyl reductase. Structure, 22, 2014
4OPC	Constructing tailored isoprenoid products by structure-guided modification of geranylgeranyl reductase. 分子名称: (1S)-2-{[{[(2R)-2,3-DIHYDROXYPROPYL]OXY}(HYDROXY)PHOSPHORYL]OXY}-1-[(PALMITOYLOXY)METHYL]ETHYL STEARATE, Conserved Archaeal protein, DIHYDROFLAVINE-ADENINE DINUCLEOTIDE 著者 McAndrew, R.P, Kung, Y, Xie, X, Liu, C, Pereira, J.H, Keasling, J.D, Adams, P.D. 登録日 2014-02-05 公開日 2014-07-09 最終更新日 2014-07-23 実験手法 X-RAY DIFFRACTION (1.4 Å) 主引用文献 Constructing tailored isoprenoid products by structure-guided modification of geranylgeranyl reductase. Structure, 22, 2014
4OPG	Constructing tailored isoprenoid products by structure-guided modification of geranylgeranyl reductase. 分子名称: Conserved Archaeal protein, DIHYDROFLAVINE-ADENINE DINUCLEOTIDE, GERANYLGERANYL DIPHOSPHATE, ... 著者 McAndrew, R.P, Kung, Y, Xie, X, Liu, C, Pereira, J.H, Keasling, J.D, Adams, P.D. 登録日 2014-02-05 公開日 2014-07-09 最終更新日 2014-07-23 実験手法 X-RAY DIFFRACTION (2.07 Å) 主引用文献 Constructing tailored isoprenoid products by structure-guided modification of geranylgeranyl reductase. Structure, 22, 2014
4QFD	Co-crystal structure of compound 2 (3-(7-hydroxy-2-oxo-4-phenyl-2H-chromen-6-yl)propanoic acid) and FAD bound to human DAAO at 2.85A 分子名称: 3-(7-hydroxy-2-oxo-4-phenyl-2H-chromen-6-yl)propanoic acid, D-amino-acid oxidase, FLAVIN-ADENINE DINUCLEOTIDE, ... 著者 Edwards, T.E, Chun, L, Arakaki, T.L. 登録日 2014-05-20 公開日 2014-07-16 最終更新日 2023-09-20 実験手法 X-RAY DIFFRACTION (2.85 Å) 主引用文献 Novel human D-amino acid oxidase inhibitors stabilize an active-site lid-open conformation. Biosci.Rep., 34, 2014
1AN9	D-AMINO ACID OXIDASE COMPLEX WITH O-AMINOBENZOATE 分子名称: 2-AMINOBENZOIC ACID, D-AMINO ACID OXIDASE, FLAVIN-ADENINE DINUCLEOTIDE 著者 Miura, R, Setoyama, C, Nishina, Y, Shiga, K, Mizutani, H, Miyahara, I, Hirotsu, K. 登録日 1997-06-28 公開日 1997-11-12 最終更新日 2023-11-15 実験手法 X-RAY DIFFRACTION (2.5 Å) 主引用文献 Structural and mechanistic studies on D-amino acid oxidase x substrate complex: implications of the crystal structure of enzyme x substrate analog complex. J.Biochem.(Tokyo), 122, 1997
1C0I	CRYSTAL STRUCTURE OF D-AMINO ACID OXIDASE IN COMPLEX WITH TWO ANTHRANYLATE MOLECULES 分子名称: 2-AMINOBENZOIC ACID, D-AMINO ACID OXIDASE, FLAVIN-ADENINE DINUCLEOTIDE 著者 Pollegioni, L, Diederichs, K, Molla, G, Umhau, S, Welte, W, Ghisla, S, Pilone, M.S. 登録日 1999-07-16 公開日 2002-02-27 最終更新日 2023-11-15 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 Yeast d-amino Acid oxidase: structural basis of its catalytic properties J.Mol.Biol., 324, 2002
1C0P	D-AMINO ACIC OXIDASE IN COMPLEX WITH D-ALANINE AND A PARTIALLY OCCUPIED BIATOMIC SPECIES 分子名称: D-ALANINE, D-AMINO ACID OXIDASE, FLAVIN-ADENINE DINUCLEOTIDE, ... 著者 Umhau, S, Pollegioni, L, Molla, G, Diederichs, K, Welte, W, Pilone, S.M, Ghisla, S. 登録日 1999-07-19 公開日 2000-11-22 最終更新日 2024-02-07 実験手法 X-RAY DIFFRACTION (1.2 Å) 主引用文献 The x-ray structure of D-amino acid oxidase at very high resolution identifies the chemical mechanism of flavin-dependent substrate dehydrogenation. Proc.Natl.Acad.Sci.USA, 97, 2000
1DAO	COVALENT ADDUCT OF D-AMINO ACID OXIDASE FROM PIG KIDNEY WITH 3-METHYL-2-OXO-VALERIC ACID 分子名称: D-AMINO ACID OXIDASE, FLAVIN-ADENINE DINUCLEOTIDE-N5-ISOBUTYL KETONE 著者 Todone, F, Mattevi, A. 登録日 1997-01-16 公開日 1997-07-23 最終更新日 2024-05-22 実験手法 X-RAY DIFFRACTION (3.2 Å) 主引用文献 Active site plasticity in D-amino acid oxidase: a crystallographic analysis. Biochemistry, 36, 1997

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