PDB: 463 件ウェブページステータス検索Chemie searchBIRD

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4BY1	elongating RNA Polymerase II-Bye1 TLD complex soaked with AMPCPP 分子名称: 5'-D(*AP*AP*AP*GP*TP*AP*CP*TP*TP*GP*AP*GP*CP*TP)-3', 5'-D(*AP*GP*CP*TP*CP*AP*AP*GP*TP*AP*CP*TP*TP*AP *TP*TP*CP*CP*BRUP*GP*GP*TP*CP*AP*AP*T)-3', 5'-R(*UP*UP*CP*GP*AP*CP*CP*AP*GP*GP*AP)-3', ... 著者 Kinkelin, K, Wozniak, G.G, Rothbart, S.B, Lidschreiber, M, Strahl, B.D, Cramer, P. 登録日 2013-07-17 公開日 2013-09-11 最終更新日 2023-12-20 実験手法 X-RAY DIFFRACTION (3.6 Å) 主引用文献 Structures of RNA Polymerase II Complexes with Bye1, a Chromatin-Binding Phf3/Dido1 Homologue Proc.Natl.Acad.Sci.USA, 110, 2013
4BY7	elongating RNA Polymerase II-Bye1 TLD complex 分子名称: , 5'-D(*DAP*AP*AP*GP*TP*AP*CP*TP*TP*GP*AP*GP*CP*DTP)-3', 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, ... 著者 Kinkelin, K, Wozniak, G.G, Rothbart, S.B, Lidschreiber, M, Strahl, B.D, Cramer, P. 登録日 2013-07-18 公開日 2013-09-11 最終更新日 2023-12-20 実験手法 X-RAY DIFFRACTION (3.15 Å) 主引用文献 Structures of RNA polymerase II complexes with Bye1, a chromatin-binding PHF3/DIDO homologue. Proc. Natl. Acad. Sci. U.S.A., 110, 2013
4MTN	Crystal structure of transcription termination factor NusA from Planctomyces limnophilus DSM 3776 分子名称: SULFATE ION, Transcription termination factor NusA 著者 Chang, C, Hatzos-Skintges, C, Clancy, S, Joachimiak, A, Midwest Center for Structural Genomics (MCSG) 登録日 2013-09-19 公開日 2013-10-02 最終更新日 2019-07-17 実験手法 X-RAY DIFFRACTION (2.579 Å) 主引用文献 Crystal structure of transcription termination factor NusA from Planctomyces limnophilus DSM 3776 TO BE PUBLISHED
4NBQ	Structure of the polynucleotide phosphorylase (CBU_0852) from Coxiella burnetii 分子名称: Polyribonucleotide nucleotidyltransferase, SULFATE ION 著者 Rudolph, M.J, Cheung, J, Franklin, M.C, Cassidy, M, Gary, E, Burshteyn, F, Love, J. 登録日 2013-10-23 公開日 2015-06-17 最終更新日 2023-12-06 実験手法 X-RAY DIFFRACTION (2.9138 Å) 主引用文献 Structural genomics for drug design against the pathogen Coxiella burnetii. Proteins, 83, 2015
4NNG	Structural basis for targeting the ribosomal protein S1 of Mycobacterium tuberculosis by pyrazinamide 分子名称: 30S ribosomal protein S1 著者 Yang, J, Liu, Y, Cai, Q, Lin, D. 登録日 2013-11-18 公開日 2014-12-24 最終更新日 2024-03-20 実験手法 X-RAY DIFFRACTION (2.02 Å) 主引用文献 Structural basis for targeting the ribosomal protein S1 of Mycobacterium tuberculosis by pyrazinamide. Mol.Microbiol., 95, 2015
4NNH	Structural basis for targeting the ribosomal protein S1 of Mycobacterium tuberculosis by pyrazinamide 分子名称: 30S ribosomal protein S1 著者 Yang, J, Liu, Y, Cai, Q, Lin, D. 登録日 2013-11-18 公開日 2014-12-24 最終更新日 2024-03-20 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 Structural basis for targeting the ribosomal protein S1 of Mycobacterium tuberculosis by pyrazinamide. Mol.Microbiol., 95, 2015
4NNI	Structural basis for targeting the ribosomal protein S1 of Mycobacterium tuberculosis by pyrazinamide 分子名称: 30S ribosomal protein S1, PYRAZINE-2-CARBOXYLIC ACID 著者 Yang, J, Liu, Y, Cai, Q, Lin, D. 登録日 2013-11-18 公開日 2014-12-24 最終更新日 2024-03-20 実験手法 X-RAY DIFFRACTION (2.64 Å) 主引用文献 Structural basis for targeting the ribosomal protein S1 of Mycobacterium tuberculosis by pyrazinamide. Mol.Microbiol., 95, 2015
4NNK	Structural basis for targeting the ribosomal protein S1 of Mycobacterium tuberculosis by pyrazinamide 分子名称: 30S ribosomal protein S1 著者 Yang, J, Liu, Y, Cai, Q, Lin, D. 登録日 2013-11-18 公開日 2014-12-24 最終更新日 2024-03-20 実験手法 X-RAY DIFFRACTION (2.31 Å) 主引用文献 Structural basis for targeting the ribosomal protein S1 of Mycobacterium tuberculosis by pyrazinamide. Mol.Microbiol., 95, 2015
4Q7J	Complex structure of viral RNA polymerase 分子名称: 30S ribosomal protein S1, Elongation factor Ts, Elongation factor Tu 1, ... 著者 Takeshita, D. 登録日 2014-04-25 公開日 2014-08-27 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (2.9 Å) 主引用文献 Molecular insights into replication initiation by Q beta replicase using ribosomal protein S1. Nucleic Acids Res., 42, 2014
4QIW	Crystal structure of euryarchaeal RNA polymerase from Thermococcus kodakarensis 分子名称: DNA-directed RNA polymerase, DNA-directed RNA polymerase subunit A'', DNA-directed RNA polymerase subunit D, ... 著者 Jun, S.-H, Murakami, K.S. 登録日 2014-06-02 公開日 2014-10-08 最終更新日 2014-11-26 実験手法 X-RAY DIFFRACTION (3.5 Å) 主引用文献 The X-ray crystal structure of the euryarchaeal RNA polymerase in an open-clamp configuration. Nat Commun, 5, 2014
4QJF	X-ray crystal structure of Thermocuccus kodakarensis RNA polymerase Rpp4/Rpo7 (RpoF/RpoE) complex 分子名称: DNA-directed RNA polymerase, subunit E', subunit F 著者 Murakami, K.S. 登録日 2014-06-03 公開日 2014-10-15 最終更新日 2024-02-28 実験手法 X-RAY DIFFRACTION (2.312 Å) 主引用文献 Crystal structure of euryarchaeal RNA polymerase and insight into the evolution of RNA polymerase II structure Nat.Commun., 2014
4R71	Structure of the Qbeta holoenzyme complex in the P1211 crystal form 分子名称: 30S ribosomal protein S1, Elongation factor Ts, Elongation factor Tu, ... 著者 Gytz, H, Seweryn, P, Kutlubaeva, Z, Chetverin, A.B, Brodersen, D.E, Knudsen, C.R. 登録日 2014-08-26 公開日 2015-09-23 最終更新日 2024-02-28 実験手法 X-RAY DIFFRACTION (3.21 Å) 主引用文献 Structural basis for RNA-genome recognition during bacteriophage Q beta replication. Nucleic Acids Res., 43, 2015
3J81	CryoEM structure of a partial yeast 48S preinitiation complex 分子名称: 18S rRNA, MAGNESIUM ION, METHIONINE, ... 著者 Hussain, T, Llacer, J.L, Fernandez, I.S, Savva, C.G, Ramakrishnan, V. 登録日 2014-08-29 公開日 2014-11-05 最終更新日 2024-02-21 実験手法 ELECTRON MICROSCOPY (4 Å) 主引用文献 Structural changes enable start codon recognition by the eukaryotic translation initiation complex. Cell(Cambridge,Mass.), 159, 2014
4V1O	Architecture of the RNA polymerase II-Mediator core transcription initiation complex 分子名称: DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB1, DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB11, DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB2, ... 著者 Plaschka, C, Lariviere, L, Wenzeck, L, Hemann, M, Tegunov, D, Petrotchenko, E.V, Borchers, C.H, Baumeister, W, Herzog, F, Villa, E, Cramer, P. 登録日 2014-09-29 公開日 2015-02-04 最終更新日 2024-05-08 実験手法 ELECTRON MICROSCOPY (9.7 Å) 主引用文献 Architecture of the RNA Polymerase II-Mediator Core Initiation Complex. Nature, 518, 2015
4V1N	Architecture of the RNA polymerase II-Mediator core transcription initiation complex 分子名称: DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB1, DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB11, DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB2, ... 著者 Plaschka, C, Lariviere, L, Wenzeck, L, Hemann, M, Tegunov, D, Petrotchenko, E.V, Borchers, C.H, Baumeister, W, Herzog, F, Villa, E, Cramer, P. 登録日 2014-09-29 公開日 2015-02-04 最終更新日 2024-05-08 実験手法 ELECTRON MICROSCOPY (7.8 Å) 主引用文献 Architecture of the RNA Polymerase II-Mediator Core Initiation Complex. Nature, 518, 2015
5C3E	Crystal structure of a transcribing RNA Polymerase II complex reveals a complete transcription bubble 分子名称: DNA-directed RNA polymerase II subunit RPB1, DNA-directed RNA polymerase II subunit RPB11, DNA-directed RNA polymerase II subunit RPB2, ... 著者 Barnes, C.O, Calero, M, Malik, I, Spahr, H, Zhang, Q, Pullara, F, Kaplan, C.D, Calero, G. 登録日 2015-06-17 公開日 2015-08-26 最終更新日 2023-09-27 実験手法 X-RAY DIFFRACTION (3.7 Å) 主引用文献 Crystal Structure of a Transcribing RNA Polymerase II Complex Reveals a Complete Transcription Bubble. Mol.Cell, 59, 2015
5C44	Crystal structure of a transcribing RNA Polymerase II complex reveals a complete transcription bubble 分子名称: DNA-directed RNA polymerase II subunit RPB1, DNA-directed RNA polymerase II subunit RPB11, DNA-directed RNA polymerase II subunit RPB2, ... 著者 Barnes, C.O, Calero, M, Malik, I, Spahr, H, Zhang, Q, Pullara, F, Kaplan, C.D, Calero, G. 登録日 2015-06-17 公開日 2015-08-26 実験手法 X-RAY DIFFRACTION (3.95 Å) 主引用文献 Crystal Structure of a Transcribing RNA Polymerase II Complex Reveals a Complete Transcription Bubble. Mol.Cell, 59, 2015
5C4A	Crystal structure of a transcribing RNA Polymerase II complex reveals a complete transcription bubble 分子名称: DNA-directed RNA polymerase II subunit RPB1, DNA-directed RNA polymerase II subunit RPB11, DNA-directed RNA polymerase II subunit RPB2, ... 著者 Barnes, C.O, Calero, M, Malik, I, Saphr, H, Zhang, Q, Pullara, F, Kaplan, C.D, Calero, G. 登録日 2015-06-17 公開日 2015-08-26 最終更新日 2023-09-27 実験手法 X-RAY DIFFRACTION (4.2 Å) 主引用文献 Crystal Structure of a Transcribing RNA Polymerase II Complex Reveals a Complete Transcription Bubble. Mol.Cell, 59, 2015
3JAP	Structure of a partial yeast 48S preinitiation complex in closed conformation 分子名称: 18S rRNA, MAGNESIUM ION, METHIONINE, ... 著者 Llacer, J.L, Hussain, T, Ramakrishnan, V. 登録日 2015-06-18 公開日 2015-08-12 最終更新日 2024-02-21 実験手法 ELECTRON MICROSCOPY (4.9 Å) 主引用文献 Conformational Differences between Open and Closed States of the Eukaryotic Translation Initiation Complex. Mol.Cell, 59, 2015
5C4X	Crystal structure of a transcribing RNA Polymerase II complex reveals a complete transcription bubble 分子名称: DNA-directed RNA polymerase II subunit RPB1, DNA-directed RNA polymerase II subunit RPB11, DNA-directed RNA polymerase II subunit RPB2, ... 著者 Barnes, C.O, Calero, M, Malik, I, Spahr, H, Zhang, Q, Pullara, F, Kaplan, C.D, Calero, G. 登録日 2015-06-18 公開日 2015-08-26 最終更新日 2023-09-27 実験手法 X-RAY DIFFRACTION (4 Å) 主引用文献 Crystal Structure of a Transcribing RNA Polymerase II Complex Reveals a Complete Transcription Bubble. Mol.Cell, 59, 2015
5C9S	Crystal Structure of the C-terminal domain of Rrp5 分子名称: GLYCEROL, rRNA biogenesis protein RRP5 著者 Khoshnevis, S, Karbstein, K. 登録日 2015-06-28 公開日 2016-05-18 最終更新日 2024-03-06 実験手法 X-RAY DIFFRACTION (2.7 Å) 主引用文献 Crystal Structure of the C-terminal domain of Rrp5 Plos Biol., 2016
5FLM	Structure of transcribing mammalian RNA polymerase II 分子名称: DNA, DNA-RNA ELONGATION SCAFFOLD, DNA-DIRECTED RNA POLYMERASE, ... 著者 Bernecky, C, Herzog, F, Baumeister, W, Plitzko, J.M, Cramer, P. 登録日 2015-10-26 公開日 2016-01-20 最終更新日 2024-05-08 実験手法 ELECTRON MICROSCOPY (3.4 Å) 主引用文献 Structure of Transcribing Mammalian RNA Polymerase II Nature, 529, 2016
5FMF	the P-lobe of RNA polymerase II pre-initiation complex 分子名称: DNA REPAIR HELICASE RAD25, SSL2, DNA REPAIR HELICASE RAD3, ... 著者 Murakami, K, Tsai, K, Kalisman, N, Bushnell, D.A, Asturias, F.J, Kornberg, R.D. 登録日 2015-11-03 公開日 2015-11-25 最終更新日 2017-07-12 実験手法 ELECTRON MICROSCOPY (6 Å) 主引用文献 Structure of an RNA Polymerase II Pre-Initiation Complex Proc.Natl.Acad.Sci.USA, 112, 2015
5F6C	The structure of E. coli RNase E catalytically inactive mutant with RNA bound 分子名称: MAGNESIUM ION, RNA (5'-R(P*GP*U)-3'), RNA (5'-R(P*GP*UP*G)-3'), ... 著者 Bandyra, K.J, Luisi, B.F. 登録日 2015-12-05 公開日 2016-12-14 最終更新日 2024-05-08 実験手法 X-RAY DIFFRACTION (3.002 Å) 主引用文献 Substrate Recognition and Autoinhibition in the Central Ribonuclease RNase E. Mol. Cell, 72, 2018
5IE8	The pyrazinoic acid binding domain of Ribosomal Protein S1 from Mycobacterium tuberculosis 分子名称: 30S ribosomal protein S1 著者 Huang, B, Liao, X. 登録日 2016-02-25 公開日 2016-03-16 最終更新日 2024-05-15 実験手法 SOLUTION NMR 主引用文献 (1)H, (15)N, (13)C resonance assignments for pyrazinoic acid binding domain of ribosomal protein S1 from Mycobacterium tuberculosis Biomol NMR Assign, 10, 2016

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