PDB: 475 件ウェブページステータス検索Chemie searchBIRD

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5MQ0	Structure of a spliceosome remodeled for exon ligation 分子名称: 3'-EXON OF UBC4 PRE-MRNA, BOUND BY PRP22 HELICASE, 5'-EXON OF UBC4 PRE-MRNA, ... 著者 Fica, S.M, Oubridge, C, Galej, W.P, Wilkinson, M.E, Newman, A.J, Bai, X.-C, Nagai, K. 登録日 2016-12-19 公開日 2017-01-18 最終更新日 2020-10-07 実験手法 ELECTRON MICROSCOPY (4.17 Å) 主引用文献 Structure of a spliceosome remodelled for exon ligation. Nature, 542, 2017
5XON	RNA Polymerase II elongation complex bound with Spt4/5 and TFIIS 分子名称: DNA (48-MER), DNA-directed RNA polymerase subunit, DNA-directed RNA polymerase subunit beta, ... 著者 Ehara, H, Yokoyama, T, Shigematsu, H, Shirouzu, M, Sekine, S. 登録日 2017-05-29 公開日 2017-08-16 最終更新日 2024-03-27 実験手法 ELECTRON MICROSCOPY (3.83 Å) 主引用文献 Structure of the complete elongation complex of RNA polymerase II with basal factors Science, 357, 2017
5VVR	Ternary complex of RNA Pol II, transcription scaffold and Rad26 分子名称: DNA (NTS), DNA (TS), DNA repair and recombination protein RAD26, ... 著者 Lahiri, I, Leschziner, A.E. 登録日 2017-05-19 公開日 2017-11-22 最終更新日 2024-03-13 実験手法 ELECTRON MICROSCOPY (5.8 Å) 主引用文献 Structural basis for the initiation of eukaryotic transcription-coupled DNA repair. Nature, 551, 2017
6SW9	IC2A model of cryo-EM structure of a full archaeal ribosomal translation initiation complex devoid of aIF1 in P. abyssi 分子名称: 16S ribosomal RNA, 30S ribosomal protein S10, 30S ribosomal protein S11, ... 著者 Coureux, P.-D, Mechulam, Y, Schmitt, E. 登録日 2019-09-20 公開日 2020-02-19 最終更新日 2024-04-24 実験手法 ELECTRON MICROSCOPY (4.2 Å) 主引用文献 Cryo-EM study of an archaeal 30S initiation complex gives insights into evolution of translation initiation. Commun Biol, 3, 2020
5OIK	Structure of an RNA polymerase II-DSIF transcription elongation complex 分子名称: DNA (43-MER), DNA-directed RNA polymerase II subunit RPB1, DNA-directed RNA polymerase II subunit RPB11, ... 著者 Bernecky, C, Plitzko, J.M, Cramer, P. 登録日 2017-07-18 公開日 2017-09-13 最終更新日 2024-05-15 実験手法 ELECTRON MICROSCOPY (3.7 Å) 主引用文献 Structure of a transcribing RNA polymerase II-DSIF complex reveals a multidentate DNA-RNA clamp. Nat. Struct. Mol. Biol., 24, 2017
6TED	Structure of complete, activated transcription complex Pol II-DSIF-PAF-SPT6 uncovers allosteric elongation activation by RTF1 分子名称: DNA (37-MER), DNA-directed RNA polymerase II subunit RPB9, DNA-directed RNA polymerase subunit, ... 著者 Vos, S.M, Farnung, L, Cramer, P. 登録日 2019-11-11 公開日 2020-07-22 実験手法 ELECTRON MICROSCOPY (3.1 Å) 主引用文献 Structure of complete Pol II-DSIF-PAF-SPT6 transcription complex reveals RTF1 allosteric activation. Nat.Struct.Mol.Biol., 27, 2020
5OQM	STRUCTURE OF YEAST TRANSCRIPTION PRE-INITIATION COMPLEX WITH TFIIH AND CORE MEDIATOR 分子名称: DNA-directed RNA polymerase II subunit RPB1, DNA-directed RNA polymerase II subunit RPB11, DNA-directed RNA polymerase II subunit RPB2, ... 著者 Schilbach, S, Hantsche, M, Tegunov, D, Dienemann, C, Wigge, C, Urlaub, H, Cramer, P. 登録日 2017-08-13 公開日 2018-05-09 最終更新日 2024-05-15 実験手法 ELECTRON MICROSCOPY (5.8 Å) 主引用文献 Structures of transcription pre-initiation complex with TFIIH and Mediator. Nature, 551, 2017
6TQN	rrn anti-termination complex without S4 分子名称: 30S ribosomal protein S10, DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, ... 著者 Huang, Y.H, Wahl, M.C, Loll, B, Hilal, T, Said, N. 登録日 2019-12-17 公開日 2020-08-05 最終更新日 2024-05-15 実験手法 ELECTRON MICROSCOPY (3.8 Å) 主引用文献 Structure-Based Mechanisms of a Molecular RNA Polymerase/Chaperone Machine Required for Ribosome Biosynthesis. Mol.Cell, 79, 2020
6SWC	IC2B model of cryo-EM structure of a full archaeal ribosomal translation initiation complex devoid of aIF1 in P. abyssi 分子名称: 16S ribosomal rRNA, 30S ribosomal protein S10, 30S ribosomal protein S11, ... 著者 Coureux, P.-D, Mechulam, Y, Schmitt, E. 登録日 2019-09-20 公開日 2020-02-19 最終更新日 2024-04-24 実験手法 ELECTRON MICROSCOPY (3.3 Å) 主引用文献 Cryo-EM study of an archaeal 30S initiation complex gives insights into evolution of translation initiation. Commun Biol, 3, 2020
5OT2	RNA polymerase II elongation complex in the presence of 3d-Napht-A 分子名称: 2-ethyl-7-methoxy-naphthalene, DNA non-template strand, DNA template strand, ... 著者 Malvezzi, S, Farnung, L, Aloisi, C, Angelov, T, Cramer, P, Sturla, S.J. 登録日 2017-08-19 公開日 2017-11-01 最終更新日 2019-07-10 実験手法 X-RAY DIFFRACTION (3.2 Å) 主引用文献 Mechanism of RNA polymerase II stalling by DNA alkylation. Proc. Natl. Acad. Sci. U.S.A., 114, 2017
6TQO	rrn anti-termination complex 分子名称: 30S ribosomal protein S10, 30S ribosomal protein S4, DNA-directed RNA polymerase subunit alpha, ... 著者 Huang, Y.H, Wahl, M.C, Loll, B, Hilal, T, Said, N. 登録日 2019-12-17 公開日 2020-08-05 最終更新日 2024-05-15 実験手法 ELECTRON MICROSCOPY (3.8 Å) 主引用文献 Structure-Based Mechanisms of a Molecular RNA Polymerase/Chaperone Machine Required for Ribosome Biosynthesis. Mol.Cell, 79, 2020
5U0S	Cryo-EM structure of the Mediator-RNAPII complex 分子名称: Mediator complex subunit 10, Mediator complex subunit 11, Mediator complex subunit 14, ... 著者 Tsai, K.-L, Yu, X, Gopalan, S, Chao, T.-C, Zhang, Y, Florens, L, Washburn, M.P, Murakami, K, Conaway, R.C, Conaway, J.W, Asturias, F. 登録日 2016-11-26 公開日 2017-03-08 最終更新日 2020-01-01 実験手法 ELECTRON MICROSCOPY (7.8 Å) 主引用文献 Mediator structure and rearrangements required for holoenzyme formation. Nature, 544, 2017
5OQJ	STRUCTURE OF YEAST TRANSCRIPTION PRE-INITIATION COMPLEX WITH TFIIH 分子名称: DNA repair helicase RAD25, DNA repair helicase RAD3, DNA-directed RNA polymerase II subunit RPB1, ... 著者 Schilbach, S, Hantsche, M, Tegunov, D, Dienemann, C, Wigge, C, Henning, U, Cramer, P. 登録日 2017-08-11 公開日 2018-04-25 最終更新日 2024-05-15 実験手法 ELECTRON MICROSCOPY (4.7 Å) 主引用文献 Structures of transcription pre-initiation complex with TFIIH and Mediator. Nature, 551, 2017
5VVS	RNA pol II elongation complex 分子名称: DNA (NTS), DNA (TS), DNA-directed RNA polymerase II subunit RPB1, ... 著者 Lahiri, I, Leschziner, A.E. 登録日 2017-05-20 公開日 2017-11-22 最終更新日 2024-03-13 実験手法 ELECTRON MICROSCOPY (6.4 Å) 主引用文献 Structural basis for the initiation of eukaryotic transcription-coupled DNA repair. Nature, 551, 2017
5WLC	The complete structure of the small subunit processome 分子名称: 18S pre-rRNA, 5' ETS, Bms1, ... 著者 Barandun, J, Chaker-Margot, M, Hunziker, M, Klinge, S. 登録日 2017-07-26 公開日 2017-09-27 最終更新日 2024-03-13 実験手法 ELECTRON MICROSCOPY (3.8 Å) 主引用文献 The complete structure of the small-subunit processome. Nat. Struct. Mol. Biol., 24, 2017
6IR9	RNA polymerase II elongation complex bound with Elf1 and Spt4/5, stalled at SHL(-1) of the nucleosome 分子名称: DNA (198-MER), DNA-directed RNA polymerase subunit, DNA-directed RNA polymerase subunit beta, ... 著者 Ehara, H, Kujirai, T, Fujino, Y, Shirouzu, M, Kurumizaka, H, Sekine, S. 登録日 2018-11-12 公開日 2019-02-20 最終更新日 2024-03-27 実験手法 ELECTRON MICROSCOPY (3.8 Å) 主引用文献 Structural insight into nucleosome transcription by RNA polymerase II with elongation factors. Science, 363, 2019
6I3M	eIF2B:eIF2 complex, phosphorylated on eIF2 alpha serine 52. 分子名称: Eukaryotic translation initiation factor 2 subunit alpha, Eukaryotic translation initiation factor 2 subunit beta, Eukaryotic translation initiation factor 2 subunit gamma, ... 著者 Adomavicius, T, Roseman, A.M, Pavitt, G.D. 登録日 2018-11-06 公開日 2019-05-22 最終更新日 2019-11-06 実験手法 ELECTRON MICROSCOPY (3.93 Å) 主引用文献 The structural basis of translational control by eIF2 phosphorylation. Nat Commun, 10, 2019
6INQ	RNA polymerase II elongation complex stalled at SHL(-1) of the nucleosome, with foreign DNA (+1 position) 分子名称: DNA (198-MER), DNA (31-MER), DNA-directed RNA polymerase subunit, ... 著者 Kujirai, T, Ehara, H, Fujino, Y, Shirouzu, M, Sekine, S, Kurumizaka, H. 登録日 2018-10-26 公開日 2019-04-03 最終更新日 2024-03-27 実験手法 ELECTRON MICROSCOPY (6.9 Å) 主引用文献 Structural basis of the nucleosome transition during RNA polymerase II passage. Science, 362, 2018
6ICZ	Cryo-EM structure of a human post-catalytic spliceosome (P complex) at 3.0 angstrom 分子名称: 116 kDa U5 small nuclear ribonucleoprotein component, ADENOSINE-5'-TRIPHOSPHATE, ATP-dependent RNA helicase DHX8, ... 著者 Zhang, X, Zhan, X, Yan, C, Shi, Y. 登録日 2018-09-07 公開日 2019-03-13 最終更新日 2020-10-14 実験手法 ELECTRON MICROSCOPY (3 Å) 主引用文献 Structures of the human spliceosomes before and after release of the ligated exon. Cell Res., 29, 2019
6I7T	eIF2B:eIF2 complex 分子名称: Eukaryotic translation initiation factor 2 subunit alpha, Eukaryotic translation initiation factor 2 subunit beta, Eukaryotic translation initiation factor 2 subunit gamma, ... 著者 Adomavicius, T, Guaita, M, Roseman, A.M, Pavitt, G.D. 登録日 2018-11-17 公開日 2019-05-22 最終更新日 2024-05-15 実験手法 ELECTRON MICROSCOPY (4.61 Å) 主引用文献 The structural basis of translational control by eIF2 phosphorylation. Nat Commun, 10, 2019
6I84	Structure of transcribing RNA polymerase II-nucleosome complex 分子名称: DNA (158-MER), DNA (170-MER), DNA-directed RNA polymerase II subunit RPB1, ... 著者 Farnung, L, Vos, S.M, Cramer, P. 登録日 2018-11-19 公開日 2019-01-02 最終更新日 2024-05-15 実験手法 ELECTRON MICROSCOPY (4.4 Å) 主引用文献 Structure of transcribing RNA polymerase II-nucleosome complex. Nat Commun, 9, 2018
5JBH	Cryo-EM structure of a full archaeal ribosomal translation initiation complex in the P-IN conformation 分子名称: 16S ribosomal RNA, 30S ribosomal protein SX, 30S ribosomal protein eL41, ... 著者 Coureux, P.-D, Schmitt, E, Mechulam, Y. 登録日 2016-04-13 公開日 2016-12-07 最終更新日 2024-06-12 実験手法 ELECTRON MICROSCOPY (5.34 Å) 主引用文献 Cryo-EM study of start codon selection during archaeal translation initiation. Nat Commun, 7, 2016
5IY7	Human holo-PIC in the open state 分子名称: DNA-directed RNA polymerase II subunit RPB1, DNA-directed RNA polymerase II subunit RPB10, DNA-directed RNA polymerase II subunit RPB11-a, ... 著者 He, Y, Yan, C, Fang, J, Inouye, C, Tjian, R, Ivanov, I, Nogales, E. 登録日 2016-03-24 公開日 2016-05-18 最終更新日 2024-03-06 実験手法 ELECTRON MICROSCOPY (8.6 Å) 主引用文献 Near-atomic resolution visualization of human transcription promoter opening. Nature, 533, 2016
5JB3	Cryo-EM structure of a full archaeal ribosomal translation initiation complex in the P-REMOTE conformation 分子名称: 16S ribosomal RNA, 30S ribosomal protein S10, 30S ribosomal protein S11, ... 著者 Coureux, P.-D, Schmitt, E, Mechulam, Y. 登録日 2016-04-13 公開日 2016-11-30 最終更新日 2019-12-11 実験手法 ELECTRON MICROSCOPY (5.34 Å) 主引用文献 Cryo-EM study of start codon selection during archaeal translation initiation. Nat Commun, 7, 2016
5K0Y	m48S late-stage initiation complex, purified from rabbit reticulocytes lysates, displaying eIF2 ternary complex and eIF3 i and g subunits relocated to the intersubunit face 分子名称: 18S ribosomal RNA, 40S ribosomal protein S12, 40S ribosomal protein S21, ... 著者 Simonetti, A, Brito Querido, J, Myasnikov, A.G, Mancera-Martinez, E, Renaud, A, Kuhn, L, Hashem, Y. 登録日 2016-05-17 公開日 2016-07-13 最終更新日 2018-04-18 実験手法 ELECTRON MICROSCOPY (5.8 Å) 主引用文献 eIF3 Peripheral Subunits Rearrangement after mRNA Binding and Start-Codon Recognition. Mol.Cell, 63, 2016

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