PDB: 45953 件ウェブページステータス検索Chemie searchBIRD

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6MUS	Cryo-EM structure of larger Csm-crRNA-target RNA ternary complex in type III-A CRISPR-Cas system 分子名称: RNA (25-MER), RNA (33-MER), Uncharacterized protein Csm1, ... 著者 Jia, N, Wang, C, Eng, E.T. 登録日 2018-10-23 公開日 2018-12-12 最終更新日 2019-01-30 実験手法 ELECTRON MICROSCOPY (3.6 Å) 主引用文献 Type III-A CRISPR-Cas Csm Complexes: Assembly, Periodic RNA Cleavage, DNase Activity Regulation, and Autoimmunity. Mol. Cell, 73, 2019
5DA9	ATP-gamma-S bound Rad50 from Chaetomium thermophilum in complex with the Rad50-binding domain of Mre11 分子名称: MAGNESIUM ION, PHOSPHOTHIOPHOSPHORIC ACID-ADENYLATE ESTER, Putative double-strand break protein, ... 著者 Seifert, F.U, Lammens, K, Stoehr, G, Kessler, B, Hopfner, K.-P. 登録日 2015-08-19 公開日 2016-03-02 実験手法 X-RAY DIFFRACTION (3 Å) 主引用文献 Structural mechanism of ATP-dependent DNA binding and DNA end bridging by eukaryotic Rad50. Embo J., 35, 2016
4RXJ	crystal structure of WHSC1L1-PWWP2 分子名称: Histone-lysine N-methyltransferase NSD3, UNKNOWN ATOM OR ION 著者 Qin, S, Tempel, W, Dong, A, Li, Y, Bountra, C, Arrowsmith, C.H, Edwards, A.M, Min, J, Structural Genomics Consortium (SGC) 登録日 2014-12-11 公開日 2015-01-28 最終更新日 2023-09-20 実験手法 X-RAY DIFFRACTION (2.1 Å) 主引用文献 Histone and DNA binding ability studies of the NSD subfamily of PWWP domains. Biochem.Biophys.Res.Commun., 569, 2021
6IPU	Human nucleosome core particle containing 145 bp of DNA 分子名称: CHLORIDE ION, DNA (145-MER), Histone H2A type 1-B/E, ... 著者 DeFalco, L, Davey, C.A. 登録日 2018-11-04 公開日 2020-01-15 最終更新日 2023-11-22 実験手法 X-RAY DIFFRACTION (1.99 Å) 主引用文献 PARP1 exhibits enhanced association and catalytic efficiency with gamma H2A.X-nucleosome. Nat Commun, 10, 2019
1S7Z	Structure of Ocr from Bacteriophage T7 分子名称: CESIUM ION, Gene 0.3 protein 著者 Walkinshaw, M.D, Taylor, P, Sturrock, S.S, Atanasiu, C, Berg, T, Henderson, R.M, Edwardson, J.M, Dryden, D.T. 登録日 2004-01-30 公開日 2004-02-10 最終更新日 2011-07-13 実験手法 X-RAY DIFFRACTION (1.83 Å) 主引用文献 Structure of Ocr from Bacteriophage T7, a Protein that Mimics B-Form DNA Mol.Cell, 9, 2002
5CZZ	Crystal structure of Staphylococcus aureus Cas9 in complex with sgRNA and target DNA (TTGAAT PAM) 分子名称: 1,2-ETHANEDIOL, CRISPR-associated endonuclease Cas9, DNA (28-MER), ... 著者 Nishimasu, H, Ishitani, R, Nureki, O. 登録日 2015-08-01 公開日 2015-09-02 最終更新日 2024-03-20 実験手法 X-RAY DIFFRACTION (2.6 Å) 主引用文献 Crystal Structure of Staphylococcus aureus Cas9. Cell, 162, 2015
2XKK	CRYSTAL STRUCTURE OF MOXIFLOXACIN, DNA, and A. BAUMANNII TOPO IV (PARE-PARC FUSION TRUNCATE) 分子名称: 1-cyclopropyl-6-fluoro-8-methoxy-7-[(4aS,7aS)-octahydro-6H-pyrrolo[3,4-b]pyridin-6-yl]-4-oxo-1,4-dihydroquinoline-3-carboxylic acid, DNA, MAGNESIUM ION, ... 著者 Wohlkonig, A, Chan, P.F, Fosberry, A.P, Homes, P, Huang, J, Kranz, M, Leydon, V.R, Miles, T.J, Pearson, N.D, Perera, R.L, Shillings, A.J, Gwynn, M.N, Bax, B.D. 登録日 2010-07-08 公開日 2010-09-01 最終更新日 2023-12-20 実験手法 X-RAY DIFFRACTION (3.25 Å) 主引用文献 Structural Basis of Quinolone Inhibition of Type Iia Topoisomerases and Target-Mediated Resistance Nat.Struct.Mol.Biol., 17, 2010
4EHS	Crystal structure of Helicobacter pylori DnaG Primase C terminal domain 分子名称: BETA-MERCAPTOETHANOL, DNA primase 著者 Abdul Rehman, S.A, Gourinath, S. 登録日 2012-04-04 公開日 2013-05-01 最終更新日 2017-11-15 実験手法 X-RAY DIFFRACTION (1.78 Å) 主引用文献 Crystal structure and mode of helicase binding of the C-terminal domain of primase from Helicobacter pylori J.Bacteriol., 195, 2013
2ADR	ADR1 DNA-BINDING DOMAIN FROM SACCHAROMYCES CEREVISIAE, NMR, 25 STRUCTURES 分子名称: ADR1, ZINC ION 著者 Bowers, P.M, Kleivt, R.E. 登録日 1998-03-20 公開日 1998-06-17 最終更新日 2024-05-22 実験手法 SOLUTION NMR 主引用文献 A folding transition and novel zinc finger accessory domain in the transcription factor ADR1. Nat.Struct.Biol., 6, 1999
7Z1Z	MVV strand transfer complex (STC) intasome in complex with LEDGF/p75 at 3.5 A resolution 分子名称: DNA (37-MER), DNA (5'-D(*GP*CP*TP*GP*CP*GP*AP*GP*AP*TP*CP*CP*GP*CP*TP*CP*CP*GP*GP*TP*G)-3'), DNA (5'-D(P*TP*TP*GP*AP*TP*TP*AP*GP*GP*GP*TP*G)-3'), ... 著者 Pye, V.E, Ballandras-Colas, A, Cherepanov, P. 登録日 2022-02-25 公開日 2022-05-11 最終更新日 2024-07-17 実験手法 ELECTRON MICROSCOPY (3.5 Å) 主引用文献 Multivalent interactions essential for lentiviral integrase function. Nat Commun, 13, 2022
3GYO	Se-Met Rtt106p 分子名称: Histone chaperone RTT106 著者 Liu, Y, Huang, H, Shi, Y, Teng, M. 登録日 2009-04-04 公開日 2009-12-08 最終更新日 2021-11-10 実験手法 X-RAY DIFFRACTION (3.1 Å) 主引用文献 Structural analysis of Rtt106p reveals a DNA-binding role required for heterochromatin silencing J.Biol.Chem., 285, 2010
7K3S	Solution NMR Structure of the Coiled-coil BRCA1-PALB2 Heterodimer 分子名称: Breast cancer type 1 susceptibility protein homolog, Partner and localizer of BRCA2 著者 Daigham, N.S, Liu, G, Bunting, S.F, Montelione, G.T. 登録日 2020-09-13 公開日 2021-09-29 最終更新日 2024-05-15 実験手法 SOLUTION NMR 主引用文献 The Structural Basis for Interactions Between PALB2 and BRCA1 that Mediate the Homologous Recombination DNA Damage Repair Process To Be Published
4CWM	High-glycosylation crystal structure of the bifunctional endonuclease (AtBFN2) from Arabidopsis thaliana 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ENDONUCLEASE 2, ZINC ION, ... 著者 Yu, T.-F, Maestre-Reyna, M, Ko, C.-Y, Ko, T.-P, Sun, Y.-J, Lin, T.-Y, Shaw, J.-F, Wang, A.H.-J. 登録日 2014-04-03 公開日 2014-07-23 最終更新日 2023-12-20 実験手法 X-RAY DIFFRACTION (2.09 Å) 主引用文献 Structural Insights of the Ssdna Binding Site in the Multifunctional Endonuclease Atbfn2 from Arabidopsis Thaliana. Plos One, 9, 2014
4CXV	Structure of bifunctional endonuclease (AtBFN2) in complex with phosphate. 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ENDONUCLEASE 2, ... 著者 Yu, T.-F, Maestre-Reyna, M, Ko, C.-Y, Ko, T.-P, Sun, Y.-J, Lin, T.-Y, Shaw, J.-F, Wang, A.H.-J. 登録日 2014-04-09 公開日 2014-07-23 最終更新日 2023-12-20 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Structural Insights of the Ssdna Binding Site in the Multifunctional Endonuclease Atbfn2 from Arabidopsis Thaliana. Plos One, 9, 2014
3NNQ	Crystal Structure of the N-terminal domain of Moloney murine leukemia virus integrase, Northeast Structural Genomics Consortium Target OR3 分子名称: ACETATE ION, N-terminal domain of Moloney murine leukemia virus integrase, ZINC ION 著者 Guan, R, Xiao, R, Acton, T, Jiang, M, Roth, M, Montelione, G.T, Northeast Structural Genomics Consortium (NESG) 登録日 2010-06-24 公開日 2010-07-14 最終更新日 2023-07-26 実験手法 X-RAY DIFFRACTION (2.693 Å) 主引用文献 X-ray crystal structure of the N-terminal region of Moloney murine leukemia virus integrase and its implications for viral DNA recognition. Proteins, 85, 2017
3A6M	Crystal structure of GrpE from Thermus thermophilus HB8 分子名称: Protein grpE 著者 Nakamura, A, Takumi, K, Miki, K. 登録日 2009-09-03 公開日 2010-01-12 最終更新日 2024-03-13 実験手法 X-RAY DIFFRACTION (3.23 Å) 主引用文献 Crystal structure of a thermophilic GrpE protein: insight into thermosensing function for the DnaK chaperone system J.Mol.Biol., 396, 2010
7UIM	CryoEM Structure of an Group II Intron Retroelement (apo-complex) 分子名称: AMMONIUM ION, E.r IIC Intron, Group II intron reverse transcriptase/maturase, ... 著者 Chung, K, Xu, L. 登録日 2022-03-29 公開日 2022-11-23 最終更新日 2024-06-12 実験手法 ELECTRON MICROSCOPY (3.1 Å) 主引用文献 Structures of a mobile intron retroelement poised to attack its structured DNA target Science, 378, 2022
6JOO	Crystal structure of Corynebacterium diphtheriae Cas9 in complex with sgRNA and target DNA 分子名称: 1,2-ETHANEDIOL, CRISPR-associated protein,CRISPR-associated endonuclease Cas9, Guide RNA, ... 著者 Hirano, S, Ishitani, R, Nishimasu, H, Nureki, O. 登録日 2019-03-22 公開日 2019-04-17 最終更新日 2019-05-15 実験手法 X-RAY DIFFRACTION (2.9 Å) 主引用文献 Structural basis for the promiscuous PAM recognition by Corynebacterium diphtheriae Cas9. Nat Commun, 10, 2019
4DDT	Thermotoga maritima reverse gyrase, C2 FORM 2 分子名称: Reverse gyrase, ZINC ION 著者 Rudolph, M.G, Klostermeier, D. 登録日 2012-01-19 公開日 2012-12-26 最終更新日 2023-09-13 実験手法 X-RAY DIFFRACTION (3.2 Å) 主引用文献 Crystal structures of Thermotoga maritima reverse gyrase: inferences for the mechanism of positive DNA supercoiling. Nucleic Acids Res., 41, 2013
4DDW	Thermotoga maritima reverse gyrase, c-centered orthorhombic form 分子名称: MAGNESIUM ION, PYROPHOSPHATE 2-, Reverse gyrase, ... 著者 Rudolph, M.G, Klostermeier, D. 登録日 2012-01-19 公開日 2012-12-26 最終更新日 2023-09-13 実験手法 X-RAY DIFFRACTION (3.9 Å) 主引用文献 Crystal structures of Thermotoga maritima reverse gyrase: inferences for the mechanism of positive DNA supercoiling. Nucleic Acids Res., 41, 2013
8A0W	Crystal structure of the HigA2 antitoxin in complex with operator DNA 分子名称: Antitoxin HigA-2, DNA (17-MER), PHOSPHATE ION 著者 Hadzi, S, Loris, R. 登録日 2022-05-30 公開日 2023-05-03 最終更新日 2024-04-24 実験手法 X-RAY DIFFRACTION (2.334 Å) 主引用文献 Fuzzy recognition by the prokaryotic transcription factor HigA2 from Vibrio cholerae. Nat Commun, 15, 2024
8CZE	Structure of a Xenopus Nucleosome with Widom 601 DNA 分子名称: Histone H2A, Histone H2B, Histone H3, ... 著者 Gu, Y, Ur, S.N, Milano, C.R, Tromer, E.C, Vale-Silva, L.A, Hochwagen, A, Corbett, K.D. 登録日 2022-05-24 公開日 2023-06-07 最終更新日 2024-04-10 実験手法 ELECTRON MICROSCOPY (2.58 Å) 主引用文献 Chromatin binding by HORMAD proteins regulates meiotic recombination initiation. Embo J., 43, 2024
6K3Z	Crystal structure of dCas9 in complex with sgRNA and DNA (TGA PAM) 分子名称: CRISPR-associated endonuclease Cas9, DNA (28-MER), DNA (5'-D(*AP*AP*AP*TP*GP*AP*TP*AP*TP*TP*G)-3'), ... 著者 Chen, W, Zhang, H, Zhang, Y, Wang, Y, Gan, J, Ji, Q. 登録日 2019-05-22 公開日 2019-09-25 最終更新日 2023-11-22 実験手法 X-RAY DIFFRACTION (3.2 Å) 主引用文献 Molecular basis for the PAM expansion and fidelity enhancement of an evolved Cas9 nuclease. Plos Biol., 17, 2019
6K4P	Crystal structure of xCas9 in complex with sgRNA and DNA (TGG PAM) 分子名称: CRISPR-associated endonuclease Cas9/Csn1, DNA (28-MER), PHOSPHATE ION, ... 著者 Chen, W, Zhang, H, Zhang, Y, Wang, Y, Gan, J, Ji, Q. 登録日 2019-05-25 公開日 2019-09-25 最終更新日 2023-11-22 実験手法 X-RAY DIFFRACTION (2.9 Å) 主引用文献 Molecular basis for the PAM expansion and fidelity enhancement of an evolved Cas9 nuclease. Plos Biol., 17, 2019
4CXP	Structure of bifunctional endonuclease (AtBFN2) from Arabidopsis thaliana in complex with sulfate 分子名称: ENDONUCLEASE 2, PENTAETHYLENE GLYCOL, SULFATE ION, ... 著者 Yu, T.-F, Maestre-Reyna, M, Ko, C.-Y, Ko, T.-P, Sun, Y.-J, Lin, T.-Y, Shaw, J.-F, Wang, A.H.-J. 登録日 2014-04-08 公開日 2014-07-23 最終更新日 2023-12-20 実験手法 X-RAY DIFFRACTION (1.22 Å) 主引用文献 Structural Insights of the Ssdna Binding Site in the Multifunctional Endonuclease Atbfn2 from Arabidopsis Thaliana. Plos One, 9, 2014

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