1OKA
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![BU of 1oka by Molmil](/molmil-images/mine/1oka) | RNA/DNA CHIMERA, NMR | 分子名称: | RNA/DNA CHIMERA (R(CCCA)D(AATGA)(DOT)D(TCATTTGGG)) | 著者 | Salazar, M, Fedoroff, O.Y, Reid, B.R. | 登録日 | 1996-04-19 | 公開日 | 1996-11-08 | 最終更新日 | 2024-05-22 | 実験手法 | SOLUTION NMR | 主引用文献 | Structure of chimeric duplex junctions: solution conformation of the retroviral Okazaki-like fragment r(ccca)d(AATGA).d(TCATTTGGG) from Moloney murine leukemia virus. Biochemistry, 35, 1996
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1TNT
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1TNS
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3ZQN
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![BU of 3zqn by Molmil](/molmil-images/mine/3zqn) | Crystal structure of the small terminase oligomerization core domain from a SPP1-like bacteriophage (crystal form 2) | 分子名称: | TERMINASE SMALL SUBUNIT | 著者 | Buttner, C.R, Chechik, M, Ortiz-Lombardia, M, Smits, C, Chechik, V, Jeschke, G, Dykeman, E, Benini, S, Alonso, J.C, Antson, A.A. | 登録日 | 2011-06-10 | 公開日 | 2011-12-28 | 最終更新日 | 2023-12-20 | 実験手法 | X-RAY DIFFRACTION (2.2 Å) | 主引用文献 | Structural Basis for DNA Recognition and Loading Into a Viral Packaging Motor. Proc.Natl.Acad.Sci.USA, 109, 2012
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6KC7
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![BU of 6kc7 by Molmil](/molmil-images/mine/6kc7) | Crystal structure of Nme1Cas9 in complex with sgRNA and target DNA (ATATGATT PAM) in seed-base paring state | 分子名称: | CRISPR-associated endonuclease Cas9, DNA (5'-D(*AP*TP*AP*TP*GP*AP*TP*TP*TP*TP*A)-3'), DNA (5'-D(*TP*AP*AP*AP*AP*TP*CP*AP*TP*AP*TP*GP*TP*AP*AP*AP*GP*TP*T)-3'), ... | 著者 | Sun, W, Yang, J, Cheng, Z, Liu, C, Wang, K, Huang, X, Wang, Y. | 登録日 | 2019-06-27 | 公開日 | 2019-11-06 | 最終更新日 | 2023-11-22 | 実験手法 | X-RAY DIFFRACTION (3.3 Å) | 主引用文献 | Structures of Neisseria meningitidis Cas9 Complexes in Catalytically Poised and Anti-CRISPR-Inhibited States. Mol.Cell, 76, 2019
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3ZQO
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![BU of 3zqo by Molmil](/molmil-images/mine/3zqo) | Crystal structure of the small terminase oligomerization core domain from a SPP1-like bacteriophage (crystal form 3) | 分子名称: | POTASSIUM ION, TERMINASE SMALL SUBUNIT | 著者 | Buttner, C.R, Chechik, M, Ortiz-Lombardia, M, Smits, C, Chechik, V, Jeschke, G, Dykeman, E, Benini, S, Alonso, J.C, Antson, A.A. | 登録日 | 2011-06-10 | 公開日 | 2011-12-28 | 最終更新日 | 2023-12-20 | 実験手法 | X-RAY DIFFRACTION (1.68 Å) | 主引用文献 | Structural Basis for DNA Recognition and Loading Into a Viral Packaging Motor. Proc.Natl.Acad.Sci.USA, 109, 2012
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6KC8
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![BU of 6kc8 by Molmil](/molmil-images/mine/6kc8) | Crystal structure of WT Nme1Cas9 in complex with sgRNA and target DNA (ATATGATT PAM) in post-cleavage state | 分子名称: | CRISPR-associated endonuclease Cas9, DNA (5'-D(*AP*TP*AP*TP*GP*AP*TP*TP*TP*TP*A)-3'), DNA (5'-D(*TP*AP*AP*AP*AP*TP*CP*AP*TP*AP*TP*GP*TP*A)-3'), ... | 著者 | Sun, W, Yang, J, Cheng, Z, Liu, C, Wang, K, Huang, X, Wang, Y. | 登録日 | 2019-06-27 | 公開日 | 2019-11-06 | 最終更新日 | 2023-11-22 | 実験手法 | X-RAY DIFFRACTION (2.9 Å) | 主引用文献 | Structures of Neisseria meningitidis Cas9 Complexes in Catalytically Poised and Anti-CRISPR-Inhibited States. Mol.Cell, 76, 2019
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1FOU
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![BU of 1fou by Molmil](/molmil-images/mine/1fou) | CONNECTOR PROTEIN FROM BACTERIOPHAGE PHI29 | 分子名称: | UPPER COLLAR PROTEIN | 著者 | Simpson, A.A, Tao, Y, Leiman, P.G, Badasso, M.O, He, Y, Jardine, P.J, Olson, N.H, Morais, M.C, Grimes, S.N, Anderson, D.L, Baker, T.S, Rossmann, M.G. | 登録日 | 2000-08-28 | 公開日 | 2000-12-22 | 最終更新日 | 2024-02-07 | 実験手法 | X-RAY DIFFRACTION (3.2 Å) | 主引用文献 | Structure of the bacteriophage phi29 DNA packaging motor. Nature, 408, 2000
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4E9E
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![BU of 4e9e by Molmil](/molmil-images/mine/4e9e) | Structure of the glycosylase domain of MBD4 | 分子名称: | Methyl-CpG-binding domain protein 4 | 著者 | Morera, S, Vigouroux, A. | 登録日 | 2012-03-21 | 公開日 | 2012-08-08 | 最終更新日 | 2023-09-13 | 実験手法 | X-RAY DIFFRACTION (1.9 Å) | 主引用文献 | Biochemical and structural characterization of the glycosylase domain of MBD4 bound to thymine and 5-hydroxymethyuracil-containing DNA. Nucleic Acids Res., 40, 2012
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8AXA
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![BU of 8axa by Molmil](/molmil-images/mine/8axa) | Cryo-EM structure of shCas12k-sgRNA-dsDNA ternary complex (type V-K CRISPR-associated transposon) | 分子名称: | Cas12k, DNA non-target strand, DNA target strand, ... | 著者 | Tenjo-Castano, F, Sofos, N, Stella, S, Fuglsang, A, Pape, T, Mesa, P, Stutzke, L.S, Temperini, P, Montoya, G. | 登録日 | 2022-08-31 | 公開日 | 2024-04-10 | 最終更新日 | 2024-07-03 | 実験手法 | ELECTRON MICROSCOPY (2.96 Å) | 主引用文献 | Conformational landscape of the type V-K CRISPR-associated transposon integration assembly. Mol.Cell, 84, 2024
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1CP8
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![BU of 1cp8 by Molmil](/molmil-images/mine/1cp8) | NMR STRUCTURE OF DNA (5'-D(TTGGCCAA)2-3') COMPLEXED WITH NOVEL ANTITUMOR DRUG UCH9 | 分子名称: | 1,2-HYDRO-1-OXY-3,4-HYDRO-3-(1-METHOXY-2-OXY-3,4-DIHYDROXYPENTYL)-8,9-DIHYDROXY-7-(SEC-BUTYL)-ANTHRACENE, DNA (5'-D(P*TP*TP*GP*GP*CP*CP*AP*A)-3'), MAGNESIUM ION, ... | 著者 | Katahira, R, Katahira, M, Yamashita, Y, Ogawa, H, Kyogoku, Y, Yoshida, M. | 登録日 | 1999-06-11 | 公開日 | 1999-07-01 | 最終更新日 | 2023-12-27 | 実験手法 | SOLUTION NMR | 主引用文献 | Solution structure of the novel antitumor drug UCH9 complexed with d(TTGGCCAA)2 as determined by NMR. Nucleic Acids Res., 26, 1998
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1EN7
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![BU of 1en7 by Molmil](/molmil-images/mine/1en7) | ENDONUCLEASE VII (ENDOVII) FROM PHAGE T4 | 分子名称: | CALCIUM ION, RECOMBINATION ENDONUCLEASE VII, ZINC ION | 著者 | Raaijmakers, H, Vix, O, Toro, I, Suck, D. | 登録日 | 1999-02-07 | 公開日 | 2000-02-07 | 最終更新日 | 2024-04-03 | 実験手法 | X-RAY DIFFRACTION (2.4 Å) | 主引用文献 | X-ray structure of T4 endonuclease VII: a DNA junction resolvase with a novel fold and unusual domain-swapped dimer architecture. EMBO J., 18, 1999
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1IH4
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1CVY
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![BU of 1cvy by Molmil](/molmil-images/mine/1cvy) | CRYSTAL STRUCTURE OF POLYAMIDE DIMER (IMPYPYPYBETADP)2 BOUND TO CCAGATCTGG | 分子名称: | 5'-D(*CP*CP*AP*GP*AP*TP*CP*TP*GP*G)-3', IMIDAZOLE-PYRROLE POLYAMIDE | 著者 | Kielkopf, C.L, Bremer, R.E, White, S, Baird, E.E, Dervan, P.B, Rees, D.C. | 登録日 | 1999-08-24 | 公開日 | 2000-01-15 | 最終更新日 | 2024-02-07 | 実験手法 | X-RAY DIFFRACTION (2.15 Å) | 主引用文献 | Structural effects of DNA sequence on T.A recognition by hydroxypyrrole/pyrrole pairs in the minor groove. J.Mol.Biol., 295, 2000
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1QGP
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![BU of 1qgp by Molmil](/molmil-images/mine/1qgp) | NMR STRUCTURE OF THE Z-ALPHA DOMAIN OF ADAR1, 15 STRUCTURES | 分子名称: | PROTEIN (DOUBLE STRANDED RNA ADENOSINE DEAMINASE) | 著者 | Schade, M, Turner, C.J, Kuehne, R, Schmieder, P, Lowenhaupt, K, Herbert, A, Rich, A, Oschkinat, H. | 登録日 | 1999-05-03 | 公開日 | 1999-10-19 | 最終更新日 | 2023-12-27 | 実験手法 | SOLUTION NMR | 主引用文献 | The solution structure of the Zalpha domain of the human RNA editing enzyme ADAR1 reveals a prepositioned binding surface for Z-DNA. Proc.Natl.Acad.Sci.USA, 96, 1999
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1LWT
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1IH6
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3G7U
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![BU of 3g7u by Molmil](/molmil-images/mine/3g7u) | Crystal structure of putative DNA modification methyltransferase encoded within prophage Cp-933R (E.coli) | 分子名称: | CHLORIDE ION, Cytosine-specific methyltransferase, GLYCEROL | 著者 | Patskovsky, Y, Ramagopal, U.A, Toro, R, Gilmore, M, Iizuka, M, Sauder, J.M, Burley, S.K, Almo, S.C, New York SGX Research Center for Structural Genomics (NYSGXRC) | 登録日 | 2009-02-10 | 公開日 | 2009-02-24 | 最終更新日 | 2024-02-21 | 実験手法 | X-RAY DIFFRACTION (1.75 Å) | 主引用文献 | Crystal Structure of DNA Modification Methyltransferase Encoded within Prophage Cp-933R (E.coli) To be Published
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1DJD
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![BU of 1djd by Molmil](/molmil-images/mine/1djd) | THE SOLUTION STRUCTURE OF A NON-BAY REGION 11R-BENZ[A]ANTHRACENE OXIDE ADDUCT AT THE N6 POSITION OF ADENINE OF AN OLIGODEOXYNUCLEOTIDE CONTAINING THE HUMAN N-RAS CODON 61 SEQUENCE | 分子名称: | 8,9,10,11-TETRAHYDRO-BENZO[A]ANTHRACENE-8,9,10-TRIOL, DNA(5'-D(*CT*GT*GT*AT*CT*AT*AT*GT*AT*AT*G)-3'), DNA(5'-D(*CT*TT*TT*CT*TT*TT*GT*TT*CT*CT*G)-3') | 著者 | Li, Z, Kim, H.Y, Tamura, P.J, Harris, C.M, Harris, T.M, Stone, M.P. | 登録日 | 1999-12-02 | 公開日 | 1999-12-16 | 最終更新日 | 2024-05-22 | 実験手法 | SOLUTION NMR | 主引用文献 | Role of a polycyclic aromatic hydrocarbon bay region ring in modulating DNA adduct structure: the non-bay region (8S,9R,10S, 11R)-N(6)-[11-(8,9,10,11-tetrahydro-8,9, 10-trihydroxybenz[a]anthracenyl)]-2' -deoxyadenosyl adduct in codon 61 of the human N-ras protooncogene Biochemistry, 38, 1999
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5I4A
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![BU of 5i4a by Molmil](/molmil-images/mine/5i4a) | X-ray crystal structure of Marinitoga piezophila Argonaute in complex with 5' OH guide RNA | 分子名称: | Argonaute protein, RNA (5'-R(*UP*AP*UP*AP*CP*AP*AP*CP*CP*UP*AP*CP*UP*U)-3') | 著者 | Doxzen, K.W, Kaya, E, Knoll, K.R, Wilson, R.C, Strutt, S.C, Kranzusch, P.J, Doudna, J.A. | 登録日 | 2016-02-11 | 公開日 | 2016-03-30 | 最終更新日 | 2024-03-06 | 実験手法 | X-RAY DIFFRACTION (1.949 Å) | 主引用文献 | A bacterial Argonaute with noncanonical guide RNA specificity. Proc.Natl.Acad.Sci.USA, 113, 2016
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1WJ2
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![BU of 1wj2 by Molmil](/molmil-images/mine/1wj2) | Solution Structure of the C-terminal WRKY Domain of AtWRKY4 | 分子名称: | Probable WRKY transcription factor 4, ZINC ION | 著者 | Yamasaki, K, Inoue, M, Kigawa, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI) | 登録日 | 2004-05-28 | 公開日 | 2004-11-28 | 最終更新日 | 2024-05-29 | 実験手法 | SOLUTION NMR | 主引用文献 | Solution structure of an Arabidopsis WRKY DNA binding domain. Plant Cell, 17, 2005
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1PCF
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363D
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![BU of 363d by Molmil](/molmil-images/mine/363d) | |
1FC8
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1FOQ
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![BU of 1foq by Molmil](/molmil-images/mine/1foq) | PENTAMERIC MODEL OF THE BACTERIOPHAGE PHI29 PROHEAD RNA | 分子名称: | BACTERIOPHAGE PHI29 PROHEAD RNA | 著者 | Simpson, A.A, Tao, Y, Leiman, P.G, Badasso, M.O, He, Y, Jardine, P.J, Olson, N.H, Morais, M.C, Grimes, S, Anderson, D.L, Baker, T.S, Rossmann, M.G. | 登録日 | 2000-08-28 | 公開日 | 2000-12-22 | 最終更新日 | 2024-02-07 | 実験手法 | ELECTRON MICROSCOPY (20 Å) | 主引用文献 | Structure of the bacteriophage phi29 DNA packaging motor. Nature, 408, 2000
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