Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

7WLW
DownloadVisualize
BU of 7wlw by Molmil
X-ray structure of thermostabilized Drosophila dopamine transporter with GABA transporter1-like substitutions in the binding site, in complex with SKF89976a
分子名称: (3S)-1-(4,4-diphenylbut-3-enyl)piperidine-3-carboxylic acid, Antibody Fragment heavy chain, Antibody fragment light chain, ...
著者Penmatsa, A, Joseph, D.
登録日2022-01-13
公開日2022-06-29
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Structural insights into GABA transport inhibition using an engineered neurotransmitter transporter.
Embo J., 41, 2022
5IZ1
DownloadVisualize
BU of 5iz1 by Molmil
Physcomitrella patens FBPase
分子名称: fructose-1,6-bisphosphatase
著者Einsle, O, Guetle, D.
登録日2016-03-24
公開日2016-06-08
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Chloroplast FBPase and SBPase are thioredoxin-linked enzymes with similar architecture but different evolutionary histories.
Proc.Natl.Acad.Sci.USA, 113, 2016
7WGD
DownloadVisualize
BU of 7wgd by Molmil
X-ray structure of thermostabilized Drosophila dopamine transporter with GABA transporter1-like substitutions in the binding site, in substrate-free form.
分子名称: Antibody fragment (9D5) Light Chain, Antibody fragment (9D5) heavy chain, CHLORIDE ION, ...
著者Joseph, D, Penmatsa, A.
登録日2021-12-28
公開日2022-06-29
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (3.2 Å)
主引用文献Structural insights into GABA transport inhibition using an engineered neurotransmitter transporter.
Embo J., 41, 2022
5J2M
DownloadVisualize
BU of 5j2m by Molmil
HIV-1 reverse transcriptase in complex with DNA and EFdA-triphosphate, a translocation-defective RT inhibitor
分子名称: 2'-deoxy-4'-ethynyl-2-fluoroadenosine 5'-(tetrahydrogen triphosphate), DNA (27-MER), DNA (5'-D(*AP*CP*AP*GP*TP*CP*CP*CP*TP*GP*TP*TP*CP*GP*GP*(MRG)P*CP*GP*CP*CP*G)-3'), ...
著者Salie, Z.L, Kirby, K.A, Sarafianos, S.G.
登録日2016-03-29
公開日2016-08-03
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.432 Å)
主引用文献Structural basis of HIV inhibition by translocation-defective RT inhibitor 4'-ethynyl-2-fluoro-2'-deoxyadenosine (EFdA).
Proc.Natl.Acad.Sci.USA, 113, 2016
5J0G
DownloadVisualize
BU of 5j0g by Molmil
Monomeric Human Cu,Zn Superoxide dismutase, loops IV and VII deleted, apo form, circular permutant P7/8
分子名称: OXIDOREDUCTASE,Superoxide dismutase [Cu-Zn]
著者Wang, H, Lang, L, Logan, D, Danielsson, J, Oliveberg, M.
登録日2016-03-28
公開日2017-02-01
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Tricking a Protein To Swap Strands.
J. Am. Chem. Soc., 138, 2016
7W71
DownloadVisualize
BU of 7w71 by Molmil
Crystal structure of the PDZ-C domain of E. coli RseP in complex with 12C7 Fab
分子名称: Heavy chain of Fab, Light chain of Fab, Regulator of sigma-E protease RseP
著者Hirose, T, Katagiri, S, Nogi, T.
登録日2021-12-02
公開日2022-09-07
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (3.2 Å)
主引用文献Mechanistic insights into intramembrane proteolysis by E. coli site-2 protease homolog RseP.
Sci Adv, 8, 2022
5J3L
DownloadVisualize
BU of 5j3l by Molmil
Structure of Transcriptional Regulatory Repressor Protein - EthR from Mycobacterium Tuberculosis in complex with 1-((2-cyclopentylethyl)sulfonyl)pyrrolidine at 1.66A resolution
分子名称: 1-[(2-cyclopentylethyl)sulfonyl]pyrrolidine, HTH-type transcriptional regulator EthR
著者Blaszczyk, M, Surade, S, Nikiforov, P.O, Abell, C, Blundell, T.L.
登録日2016-03-31
公開日2017-03-29
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.66 Å)
主引用文献Fragment-Sized EthR Inhibitors Exhibit Exceptionally Strong Ethionamide Boosting Effect in Whole-Cell Mycobacterium tuberculosis Assays.
ACS Chem. Biol., 12, 2017
5J1X
DownloadVisualize
BU of 5j1x by Molmil
X-ray structure of neuropilin-1 b1 domain complexed with Arg-5 ligand.
分子名称: DIMETHYL SULFOXIDE, Neuropilin-1, N~2~-(tert-butoxycarbonyl)-L-arginine
著者Fotinou, C, Rana, R, Djordjevic, S, Yelland, T.
登録日2016-03-29
公開日2017-04-05
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Architecture and hydration of the arginine-binding site of neuropilin-1.
FEBS J., 285, 2018
5J3P
DownloadVisualize
BU of 5j3p by Molmil
Crystal structure of the catalytic domain of human tyrosyl DNA phosphodiesterase 2
分子名称: GLYCEROL, MAGNESIUM ION, Tyrosyl-DNA phosphodiesterase 2
著者Hornyak, P, Pearl, L.H, Caldecott, K.W, Oliver, A.W.
登録日2016-03-31
公開日2016-05-04
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (3.1 Å)
主引用文献Mode of action of DNA-competitive small molecule inhibitors of tyrosyl DNA phosphodiesterase 2.
Biochem.J., 473, 2016
5J3Y
DownloadVisualize
BU of 5j3y by Molmil
Crystal structure of S. pombe Dcp2:Dcp1 mRNA decapping complex
分子名称: mRNA decapping complex subunit 2, mRNA-decapping enzyme subunit 1
著者Valkov, E, Muthukumar, S, Chang, C.T, Jonas, S, Weichenrieder, O, Izaurralde, E.
登録日2016-03-31
公開日2016-05-18
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (3.288 Å)
主引用文献Structure of the Dcp2-Dcp1 mRNA-decapping complex in the activated conformation.
Nat.Struct.Mol.Biol., 23, 2016
7WM6
DownloadVisualize
BU of 7wm6 by Molmil
Crystal structure of SAH-bound TrmM from Mycoplasma capricolum
分子名称: Methyltransferase, S-ADENOSYL-L-HOMOCYSTEINE, SULFATE ION
著者Jeong, H, Kim, J.
登録日2022-01-14
公開日2022-06-29
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.54 Å)
主引用文献Structural and functional characterization of TrmM in m 6 A modification of bacterial tRNA.
Protein Sci., 31, 2022
5J2P
DownloadVisualize
BU of 5j2p by Molmil
HIV-1 reverse transcriptase in complex with DNA that has incorporated EFdA-MP at the P-(post-translocation) site and a second EFdA-MP at the N-(pre-translocation) site
分子名称: 2'-deoxy-4'-ethynyl-2-fluoroadenosine 5'-(dihydrogen phosphate), DNA (27-MER), DNA (5'-D(*AP*CP*AP*GP*TP*CP*CP*CP*TP*GP*TP*TP*CP*GP*GP*(MRG)P*CP*GP*CP*CP*(6FM)P*(6FM))-3'), ...
著者Salie, Z.L, Kirby, K.A, Sarafianos, S.G.
登録日2016-03-29
公開日2016-08-03
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.53 Å)
主引用文献Structural basis of HIV inhibition by translocation-defective RT inhibitor 4'-ethynyl-2-fluoro-2'-deoxyadenosine (EFdA).
Proc.Natl.Acad.Sci.USA, 113, 2016
5J3E
DownloadVisualize
BU of 5j3e by Molmil
Crystal Structure of Human THYN1 protein in complex with 5-methylcytosine containing DNA
分子名称: 5-methylcytosine containing DNA, Thymocyte nuclear protein 1, UNKNOWN ATOM OR ION
著者Halabelian, L, Tempel, W, Li, Y, Bountra, C, Edwards, A.M, Arrowsmith, C.H, Structural Genomics Consortium (SGC)
登録日2016-03-30
公開日2016-04-20
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Crystal Structure of Human THYN1 protein in complex with 5-methylcytosine containing DNA
To be published
8GJZ
DownloadVisualize
BU of 8gjz by Molmil
Structure of a STING receptor from S. pistillata Sp-STING1 bound to 2'3'-cUA
分子名称: 2'3'-cUA, Stimulator of interferon genes protein
著者Li, Y, Toyoda, H, Slavik, K.M, Morehouse, B.R, Kranzusch, P.J.
登録日2023-03-16
公開日2023-07-05
最終更新日2023-08-02
実験手法X-RAY DIFFRACTION (2.92 Å)
主引用文献cGLRs are a diverse family of pattern recognition receptors in innate immunity.
Cell, 186, 2023
8GCB
DownloadVisualize
BU of 8gcb by Molmil
Structure of RNF125 in complex with a UbcH5b~Ub conjugate
分子名称: E3 ubiquitin-protein ligase RNF125, Ubiquitin-conjugating enzyme E2 D2, ZINC ION
著者Middleton, A.J, Day, C.L, Fokkens, T.J.
登録日2023-03-01
公開日2023-07-19
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.39 Å)
主引用文献Zinc finger 1 of the RING E3 ligase, RNF125, interacts with the E2 to enhance ubiquitylation.
Structure, 31, 2023
5J4M
DownloadVisualize
BU of 5j4m by Molmil
Crystal structure of shaft pilin SpaA from Lactobacillus rhamnosus GG - E269A/D295N double mutant
分子名称: Cell surface protein SpaA
著者Chaurasia, P, Pratap, S, von Ossowski, I, Palva, A, Krishnan, V.
登録日2016-04-01
公開日2016-07-20
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.99 Å)
主引用文献New insights about pilus formation in gut-adapted Lactobacillus rhamnosus GG from the crystal structure of the SpaA backbone-pilin subunit
Sci Rep, 6, 2016
8GUV
DownloadVisualize
BU of 8guv by Molmil
LecA from Pseudomonas aeruginosa in complex with tolcapone (CAS: 134308-13-7)
分子名称: CALCIUM ION, PA-I galactophilic lectin, Tolcapone
著者Kuhaudomlarp, S, Siebs, E, Varrot, A, Imberty, A, Titz, A.
登録日2022-09-13
公開日2023-07-19
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.32 Å)
主引用文献LecA from Pseudomonas aeruginosa in complex with tolcapone (CAS: 134308-13-7)
To Be Published
7W70
DownloadVisualize
BU of 7w70 by Molmil
Crystal structure of the PDZ-C domain fragment of Kangiella koreensis RseP orthologue
分子名称: Zinc metalloprotease
著者Miyoshi, K, Nogi, T.
登録日2021-12-02
公開日2022-09-07
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.15 Å)
主引用文献Mechanistic insights into intramembrane proteolysis by E. coli site-2 protease homolog RseP.
Sci Adv, 8, 2022
7WGT
DownloadVisualize
BU of 7wgt by Molmil
X-ray structure of thermostabilized Drosophila dopamine transporter with GABA transporter1-like substitutions in the binding site, in complex with NO711.
分子名称: 1-(2-{[(diphenylmethylidene)amino]oxy}ethyl)-1,2,5,6-tetrahydropyridine-3-carboxylic acid, Antibody fragment (9D5) heavy chain, Antibody fragment (9D5) light chain, ...
著者Joseph, D, Penmatsa, A.
登録日2021-12-28
公開日2022-06-29
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.75 Å)
主引用文献Structural insights into GABA transport inhibition using an engineered neurotransmitter transporter.
Embo J., 41, 2022
5J6Y
DownloadVisualize
BU of 5j6y by Molmil
Crystal structure of PA14 domain of MpAFP Antifreeze protein
分子名称: Antifreeze protein, CALCIUM ION, alpha-D-glucopyranose, ...
著者Guo, S.
登録日2016-04-05
公開日2017-06-07
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (1.03 Å)
主引用文献Structure of a 1.5-MDa adhesin that binds its Antarctic bacterium to diatoms and ice.
Sci Adv, 3, 2017
8GBQ
DownloadVisualize
BU of 8gbq by Molmil
Structure of RNF125 in complex with UbcH5b
分子名称: E3 ubiquitin-protein ligase RNF125, GLYCEROL, Ubiquitin-conjugating enzyme E2 D2, ...
著者Middleton, A.J, Day, C.L, Fokkens, T.J.
登録日2023-02-27
公開日2023-07-19
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.74 Å)
主引用文献Zinc finger 1 of the RING E3 ligase, RNF125, interacts with the E2 to enhance ubiquitylation.
Structure, 31, 2023
8GTU
DownloadVisualize
BU of 8gtu by Molmil
Crystal Structure of putative amino acid binding periplasmic ABC transporter protein from Candidatus Liberibacter asiaticus in complex with Clidinium
分子名称: Putative amino acid-binding periplasmic ABC transporter protein, [(3~{S})-1-methyl-1-azoniabicyclo[2.2.2]octan-3-yl] 2-oxidanyl-2,2-diphenyl-ethanoate
著者Lonare, S, Sharma, M, Sharma, A.K.
登録日2022-09-08
公開日2023-07-26
実験手法X-RAY DIFFRACTION (2.56 Å)
主引用文献Identification and evaluation of potential inhibitor molecules against TcyA from Candidatus Liberibacter asiaticus.
J.Struct.Biol., 215, 2023
7WQG
DownloadVisualize
BU of 7wqg by Molmil
Bovin Alpha-lactalbumin binding with zinc ions
分子名称: Alpha-lactalbumin, ZINC ION
著者Li, T, Zhang, T.
登録日2022-01-25
公開日2022-08-31
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Zinc binding strength of proteins dominants zinc uptake in Caco-2 cells.
Rsc Adv, 12, 2022
5J8Y
DownloadVisualize
BU of 5j8y by Molmil
Crystal structure of the Scm-SAM and Sfmbt-SAM heterodimer
分子名称: Polycomb protein Scm, Polycomb protein Sfmbt
著者Frey, F, Benda, C, Mueller, J.
登録日2016-04-08
公開日2016-05-18
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.98 Å)
主引用文献Molecular basis of PRC1 targeting to Polycomb response elements by PhoRC.
Genes Dev., 30, 2016
7W7H
DownloadVisualize
BU of 7w7h by Molmil
S Suis FakA-FakB2 complex structure
分子名称: OLEIC ACID, Predicted kinase related to dihydroxyacetone kinase, SULFATE ION, ...
著者Shi, Y, Zang, N, Lou, N, Xu, Y, Sun, J, Huang, M, Zhang, H, Lu, H, Zhou, C, Feng, Y.
登録日2021-12-04
公開日2022-09-21
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Structure and mechanism for streptococcal fatty acid kinase (Fak) system dedicated to host fatty acid scavenging.
Sci Adv, 8, 2022

222624

件を2024-07-17に公開中

PDB statisticsPDBj update infoContact PDBjnumon