Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

5WZV
DownloadVisualize
BU of 5wzv by Molmil
Crystal structure of human secreted phospholipase A2 group IIE with Me-indoxam
分子名称: 2-[2-methyl-3-oxamoyl-1-[(2-phenylphenyl)methyl]indol-4-yl]oxyethanoic acid, CALCIUM ION, CHLORIDE ION, ...
著者Hou, S, Xu, J, Xu, T, Liu, J.
登録日2017-01-18
公開日2018-01-24
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Structural basis for functional selectivity and ligand recognition revealed by crystal structures of human secreted phospholipase A2 group IIE
Sci Rep, 7, 2017
4ZIN
DownloadVisualize
BU of 4zin by Molmil
Genetically encoded Phenyl Azide Photochemistry Drive Positive and Negative Functional Modulation of a Red Fluorescent Protein
分子名称: 1,2-ETHANEDIOL, MCherry fluorescent protein, SULFATE ION
著者Reddington, S.C, Driezis, S, Hartley, A.M, Watson, P.D, Rizkallah, P.J, Jones, D.D.
登録日2015-04-28
公開日2015-09-16
最終更新日2024-05-29
実験手法X-RAY DIFFRACTION (1.67 Å)
主引用文献Genetically encoded phenyl azide photochemistry drives positive and negative functional modulation of a red fluorescent protein
Rsc Adv, 5, 2015
4ZJN
DownloadVisualize
BU of 4zjn by Molmil
Crystal structure of the bacteriophage G20C portal protein
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, Portal protein
著者Williams, L.S, Turkenburg, J.P, Levdikov, V.M, Minakhin, L, Severinov, K, Antson, A.A.
登録日2015-04-29
公開日2015-05-27
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (1.98 Å)
主引用文献Crystal structure of the bacteriophage G20C portal protein
To be published
5XE1
DownloadVisualize
BU of 5xe1 by Molmil
Crystal structure of the indoleamine 2,3-dioxygenagse 1 (IDO1) complexed with INCB14943
分子名称: 4-Amino-N-(3-chloro-4-fluorophenyl)-N'-hydroxy-1,2,5-oxadiazole-3-carboxamidine, Indoleamine 2,3-dioxygenase 1, PROTOPORPHYRIN IX CONTAINING FE
著者Xu, J, Wu, U, Liu, J.
登録日2017-03-31
公開日2017-05-03
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (3.2 Å)
主引用文献Structural insights into the binding mechanism of IDO1 with hydroxylamidine based inhibitor INCB14943
Biochem. Biophys. Res. Commun., 487, 2017
5XHM
DownloadVisualize
BU of 5xhm by Molmil
Crystal structure of Frog M-ferritin D40A mutant
分子名称: CHLORIDE ION, Ferritin, middle subunit, ...
著者Jagdev, M.K, Vasudevan, D.
登録日2017-04-21
公開日2017-08-09
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Surface charge dependent separation of modified and hybrid ferritin in native PAGE: Impact of lysine 104
Biochim. Biophys. Acta, 1865, 2017
5XN3
DownloadVisualize
BU of 5xn3 by Molmil
Crystal structure of SPSB2 in complex with a rational designed RGD containing cyclic peptide inhibitor of SPSB2-iNOS interaction
分子名称: SPRY domain-containing SOCS box protein 2, cR8 peptide from NOS2
著者You, T, Kuang, Z.
登録日2017-05-17
公開日2017-06-14
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.34 Å)
主引用文献Crystal structure of SPSB2 in complex with a rational designed RGD-containing cyclic peptide inhibitor of SPSB2-iNOS interaction.
Biochem. Biophys. Res. Commun., 489, 2017
5XOZ
DownloadVisualize
BU of 5xoz by Molmil
Crystal structure of a Kunitz type trypsin inhibitor from Cicer arietinumL
分子名称: Trypsin protein inhibitor 2
著者Bendre, A.D, Suresh, C.G, Ramasamy, S.
登録日2017-05-31
公開日2018-06-20
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Structural insights into the unique inhibitory mechanism of Kunitz type trypsin inhibitor from Cicer arietinum L.
J.Biomol.Struct.Dyn., 37, 2019
5XT8
DownloadVisualize
BU of 5xt8 by Molmil
Magnesium bound apo structure of thymidylate kinase (form I) from Thermus thermophilus HB8
分子名称: 1,2-ETHANEDIOL, CHLORIDE ION, MAGNESIUM ION, ...
著者Chaudhary, S.K, Jeyakanthan, J, Sekar, K.
登録日2017-06-17
公開日2018-04-18
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.01 Å)
主引用文献Structural and functional roles of dynamically correlated residues in thymidylate kinase.
Acta Crystallogr D Struct Biol, 74, 2018
5XGS
DownloadVisualize
BU of 5xgs by Molmil
Crystal structure of human WBSCR16
分子名称: RCC1-like G exchanging factor-like protein
著者Koyama, M, Sasaki, N, Matsuura, Y.
登録日2017-04-16
公開日2017-06-21
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystal structure of human WBSCR16, an RCC1-like protein in mitochondria
Protein Sci., 26, 2017
5XH7
DownloadVisualize
BU of 5xh7 by Molmil
Crystal structure of the Acidaminococcus sp. BV3L6 Cpf1 RR variant in complex with crRNA and target DNA (TCCA PAM)
分子名称: 1,2-ETHANEDIOL, CHLORIDE ION, CRISPR-associated endonuclease Cpf1, ...
著者Nishimasu, H, Yamano, T, Ishitani, R, Nureki, O.
登録日2017-04-19
公開日2017-06-14
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structural Basis for the Altered PAM Recognition by Engineered CRISPR-Cpf1
Mol. Cell, 67, 2017
5X7J
DownloadVisualize
BU of 5x7j by Molmil
Crystal structure of thymidylate kinase from thermus thermophilus HB8
分子名称: 1,2-ETHANEDIOL, CALCIUM ION, CHLORIDE ION, ...
著者Chaudhary, S.K, Jeyakanthan, J, Sekar, K.
登録日2017-02-27
公開日2018-03-07
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.84 Å)
主引用文献Insights into product release dynamics through structural analyses of thymidylate kinase.
Int. J. Biol. Macromol., 123, 2019
5X9Q
DownloadVisualize
BU of 5x9q by Molmil
Crystal structure of HldC from Burkholderia pseudomallei
分子名称: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, Putative cytidylyltransferase
著者Park, J, Kim, H, Kim, S, Lee, D, Shin, D.H.
登録日2017-03-08
公開日2017-12-27
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Crystal structure of D-glycero-Beta-D-manno-heptose-1-phosphate adenylyltransferase from Burkholderia pseudomallei.
Proteins, 86, 2018
5XAF
DownloadVisualize
BU of 5xaf by Molmil
Crystal structure of tubulin-stathmin-TTL-Compound Z1 complex
分子名称: (3S,4R)-4-(3-hydroxy-4-methoxyphenyl)-3-methyl-1-(3,4,5-trimethoxyphenyl)azetidin-2-one, 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, CALCIUM ION, ...
著者Zhang, H, Luo, C, Wang, Y.
登録日2017-03-12
公開日2017-12-20
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.551 Å)
主引用文献Design, synthesis, biological evaluation and cocrystal structures with tubulin of chiral beta-lactam bridged combretastatin A-4 analogues as potent antitumor agents
Eur J Med Chem, 144, 2017
5XB5
DownloadVisualize
BU of 5xb5 by Molmil
Crystal structure of R90A mutant of thymidylate kinase (aq_969) from Aquifex Aeolicus VF5
分子名称: PHOSPHATE ION, Thymidylate kinase
著者Biswas, A, Jeyakanthan, J, Sekar, K.
登録日2017-03-15
公開日2017-06-28
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.23 Å)
主引用文献Structural studies of a hyperthermophilic thymidylate kinase enzyme reveal conformational substates along the reaction coordinate.
FEBS J., 284, 2017
5XUQ
DownloadVisualize
BU of 5xuq by Molmil
Crystal structure of VDR-LBD complexed with an antagonist, 2-methylidene-19,26,27-trinor-22-(S)-butyl-1-hydroxy-25-oxo-25-(1H-pyrrol-2-yl)- vitamin D3
分子名称: (4~{S})-4-[(1~{R})-1-[(1~{R},3~{a}~{S},4~{E},7~{a}~{R})-7~{a}-methyl-4-[2-[(3~{R},5~{R})-4-methylidene-3,5-bis(oxidanyl)cyclohexylidene]ethylidene]-2,3,3~{a},5,6,7-hexahydro-1~{H}-inden-1-yl]ethyl]-1-(1~{H}-pyrrol-2-yl)octan-1-one, Mediator of RNA polymerase II transcription subunit 1, Vitamin D3 receptor
著者Kato, A, Itoh, T, Yamamoto, K.
登録日2017-06-24
公開日2018-06-27
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Discovery of Potent Vitamin D Receptor Antagonist
To Be Published
5XVN
DownloadVisualize
BU of 5xvn by Molmil
E. far Cas1-Cas2/prespacer binary complex
分子名称: CRISPR-associated endonuclease Cas1, CRISPR-associated endoribonuclease Cas2, DNA (28-MER), ...
著者Xiao, Y, Ng, S, Nam, K.H, Ke, A.
登録日2017-06-28
公開日2017-10-04
最終更新日2024-05-22
実験手法X-RAY DIFFRACTION (3.25 Å)
主引用文献How type II CRISPR-Cas establish immunity through Cas1-Cas2-mediated spacer integration.
Nature, 550, 2017
5XWK
DownloadVisualize
BU of 5xwk by Molmil
Crystal Structure of SPAP, an alkaline phosphatase from Sphingomonas in complex with inorganic phosphate
分子名称: Alkaline phosphatase PhoK, CALCIUM ION, GLYCEROL, ...
著者Bihani, S.C, Hosur, M.V.
登録日2017-06-29
公開日2018-07-18
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.901 Å)
主引用文献Crystal Structure of SPAP, an alkaline phosphatase from Sphingomonas in complex with
To Be Published
6A43
DownloadVisualize
BU of 6a43 by Molmil
R1EN(5-225)-ubiquitin fusion
分子名称: ACETIC ACID, RNA-directed DNA polymerase homolog (R1),Polyubiquitin-C
著者Maita, N.
登録日2018-06-19
公開日2018-10-24
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Crystal Structure Determination of Ubiquitin by Fusion to a Protein That Forms a Highly Porous Crystal Lattice
J. Am. Chem. Soc., 140, 2018
6A4X
DownloadVisualize
BU of 6a4x by Molmil
Oxidase ChaP-H2
分子名称: Bleomycin resistance protein, FE (II) ION
著者Zhang, B, Wang, Y.S, Ge, H.M.
登録日2018-06-21
公開日2018-08-29
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.63 Å)
主引用文献Molecular Basis for the Final Oxidative Rearrangement Steps in Chartreusin Biosynthesis.
J. Am. Chem. Soc., 140, 2018
6A4Z
DownloadVisualize
BU of 6a4z by Molmil
Oxidase ChaP
分子名称: ChaP protein, FE (II) ION
著者Zhang, B, Ge, H.M.
登録日2018-06-21
公開日2018-08-29
最終更新日2018-09-19
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Molecular Basis for the Final Oxidative Rearrangement Steps in Chartreusin Biosynthesis.
J. Am. Chem. Soc., 140, 2018
6A5Z
DownloadVisualize
BU of 6a5z by Molmil
Crystal structure of human FXR/RXR-LBD heterodimer bound to HNC180 and 9cRA and SRC1
分子名称: (9cis)-retinoic acid, 2-[(1R,5S)-9-[[3-[2,6-bis(chloranyl)phenyl]-5-cyclopropyl-1,2-oxazol-4-yl]methoxy]-3-azabicyclo[3.3.1]nonan-3-yl]-1,3-benzothiazole-6-carboxylic acid, Bile acid receptor, ...
著者Wang, N, Liu, J.
登録日2018-06-25
公開日2018-10-10
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (2.95 Å)
主引用文献Ligand binding and heterodimerization with retinoid X receptor alpha (RXR alpha ) induce farnesoid X receptor (FXR) conformational changes affecting coactivator binding
J. Biol. Chem., 293, 2018
5ZSI
DownloadVisualize
BU of 5zsi by Molmil
Crystal structure of monkey TLR7 in complex with CL097
分子名称: 2-(ethoxymethyl)-1H-imidazo[4,5-c]quinolin-4-amine, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Zhang, Z, Ohto, U, Shimizu, T.
登録日2018-04-28
公開日2019-01-30
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Structural Analyses of Toll-like Receptor 7 Reveal Detailed RNA Sequence Specificity and Recognition Mechanism of Agonistic Ligands.
Cell Rep, 25, 2018
5ZZA
DownloadVisualize
BU of 5zza by Molmil
OdinProfilin/Rabbit Actin Complex
分子名称: ADENOSINE-5'-TRIPHOSPHATE, Actin, alpha skeletal muscle, ...
著者Robinson, R.C, Akil, C.
登録日2018-05-31
公開日2018-10-10
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.53 Å)
主引用文献Genomes of Asgard archaea encode profilins that regulate actin.
Nature, 562, 2018
5ZSN
DownloadVisualize
BU of 5zsn by Molmil
Crystal structure of monkey TLR7 in complex with AAUUAA
分子名称: 2',3'- cyclic AMP, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Zhang, Z, Ohto, U, Shimizu, T.
登録日2018-04-28
公開日2019-01-30
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Structural Analyses of Toll-like Receptor 7 Reveal Detailed RNA Sequence Specificity and Recognition Mechanism of Agonistic Ligands.
Cell Rep, 25, 2018
5ZZW
DownloadVisualize
BU of 5zzw by Molmil
Proteobacterial origin of protein arginine methylation and regulation of Complex I assembly by MidA
分子名称: Protein arginine methyltransferase NDUFAF7 homolog, mitochondrial, S-ADENOSYL-L-HOMOCYSTEINE
著者Arold, S.T, Swaminathan, K, Hameed, U.F.S.
登録日2018-06-04
公開日2018-08-22
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Proteobacterial Origin of Protein Arginine Methylation and Regulation of Complex I Assembly by MidA.
Cell Rep, 24, 2018

222624

件を2024-07-17に公開中

PDB statisticsPDBj update infoContact PDBjnumon