PDB: 19326 件ウェブページステータス検索Chemie searchBIRD

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3SM4	Crystal Structure of the K131A Mutant of Lambda Exonuclease in Complex with a 5'-Phosphorylated 14-mer/12-mer Duplex and Magnesium 分子名称: 5'-D(*TP*CP*GP*GP*TP*AP*CP*AP*GP*TP*AP*G)-3', 5'-D(P*AP*GP*CP*TP*AP*CP*TP*GP*TP*AP*CP*CP*GP*A)-3', CHLORIDE ION, ... 著者 Bell, C.E, Zhang, J. 登録日 2011-06-27 公開日 2011-07-20 最終更新日 2023-09-13 実験手法 X-RAY DIFFRACTION (1.88 Å) 主引用文献 Crystal structures of {lambda} exonuclease in complex with DNA suggest an electrostatic ratchet mechanism for processivity. Proc.Natl.Acad.Sci.USA, 108, 2011
3SLP	Crystal Structure of Lambda Exonuclease in Complex with a 12 BP Symmetric DNA Duplex 分子名称: 5'-D(*GP*CP*GP*AP*CP*TP*AP*GP*TP*CP*GP*C)-3', CALCIUM ION, CHLORIDE ION, ... 著者 Bell, C.E, Zhang, J. 登録日 2011-06-24 公開日 2011-07-20 最終更新日 2023-09-13 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 Crystal structures of {lambda} exonuclease in complex with DNA suggest an electrostatic ratchet mechanism for processivity. Proc.Natl.Acad.Sci.USA, 108, 2011
3SMB	Phenethylisothiocyanate Covalently Bound to Macrophage Migration Inhibitory Factor (MIF) 分子名称: CHLORIDE ION, Macrophage migration inhibitory factor, N-(2-phenylethyl)thioformamide, ... 著者 Crichlow, G.V, Lolis, E.J. 登録日 2011-06-27 公開日 2012-10-03 最終更新日 2023-09-13 実験手法 X-RAY DIFFRACTION (1.6 Å) 主引用文献 Structural interactions dictate the kinetics of macrophage migration inhibitory factor inhibition by different cancer-preventive isothiocyanates. Biochemistry, 51, 2012
3SME	Structure of PTP1B inactivated by H2O2/bicarbonate 分子名称: MAGNESIUM ION, Tyrosine-protein phosphatase non-receptor type 1 著者 Tanner, J.J, Singh, H. 登録日 2011-06-27 公開日 2011-10-19 最終更新日 2023-09-13 実験手法 X-RAY DIFFRACTION (1.7 Å) 主引用文献 The Biological Buffer Bicarbonate/CO(2) Potentiates H(2)O(2)-Mediated Inactivation of Protein Tyrosine Phosphatases. J.Am.Chem.Soc., 133, 2011
3S4B	Cellobiose phosphorylase from Cellulomonas uda in complex with glucose 分子名称: Cellobiose phosphorylase, alpha-D-glucopyranose 著者 Van Hoorebeke, A, Stout, J, Soetaert, W, Van Beeumen, J, Desmet, T, Savvides, S. 登録日 2011-05-19 公開日 2012-06-27 最終更新日 2024-02-28 実験手法 X-RAY DIFFRACTION (2.4 Å) 主引用文献 Cellobiose phosphorylase: reconstructing the structural itinerary along the catalytic pathway To be Published
8S8A	Human pyridoxal phosphatase in complex with 7,8-dihydroxyflavone without phosphate 分子名称: 7,8-bis(oxidanyl)-2-phenyl-chromen-4-one, CHLORIDE ION, Chronophin, ... 著者 Brenner, M, Gohla, A, Schindelin, H. 登録日 2024-03-06 公開日 2024-06-12 最終更新日 2024-06-26 実験手法 X-RAY DIFFRACTION (1.5 Å) 主引用文献 7,8-Dihydroxyflavone is a direct inhibitor of human and murine pyridoxal phosphatase. Elife, 13, 2024
3S5O	Crystal Structure of Human 4-hydroxy-2-oxoglutarate Aldolase Bound to Pyruvate 分子名称: 1,2-ETHANEDIOL, 4-hydroxy-2-oxoglutarate aldolase, mitochondrial, ... 著者 Riedel, T.J, Lowther, W.T. 登録日 2011-05-23 公開日 2011-10-26 実験手法 X-RAY DIFFRACTION (1.97 Å) 主引用文献 Structural and Biochemical Studies of Human 4-hydroxy-2-oxoglutarate Aldolase: Implications for Hydroxyproline Metabolism in Primary Hyperoxaluria. Plos One, 6, 2011
2EW6	Structure of Helicobacter Pylori peptide deformylase in complex with inhibitor 分子名称: (2E)-3-(3,4-DIHYDROXYPHENYL)-N-[2-(4-HYDROXYPHENYL)ETHYL]ACRYLAMIDE, COBALT (II) ION, peptide deformylase 著者 Cai, J. 登録日 2005-11-02 公開日 2006-10-24 最終更新日 2023-10-25 実験手法 X-RAY DIFFRACTION (2.2 Å) 主引用文献 Peptide deformylase is a potential target for anti-Helicobacter pylori drugs: reverse docking, enzymatic assay, and X-ray crystallography validation Protein Sci., 15, 2006
3SNO	Crystal structure of a putative aminotransferase (NCgl2491) from Corynebacterium glutamicum ATCC 13032 at 1.60 A resolution 分子名称: 1,2-ETHANEDIOL, Hypothetical aminotransferase 著者 Joint Center for Structural Genomics (JCSG) 登録日 2011-06-29 公開日 2011-07-20 最終更新日 2023-02-01 実験手法 X-RAY DIFFRACTION (1.6 Å) 主引用文献 Crystal structure of a Hypothetical aminotransferase (NCgl2491) from CORYNEBACTERIUM GLUTAMICUM ATCC 13032 KITASATO at 1.60 A resolution To be published
3S5U	Crystal structure of CRISPR associated protein 分子名称: CALCIUM ION, Putative uncharacterized protein 著者 Ke, A, Nam, K.H. 登録日 2011-05-23 公開日 2011-06-22 最終更新日 2024-02-28 実験手法 X-RAY DIFFRACTION (2.7 Å) 主引用文献 Crystal structure of clustered regularly interspaced short palindromic repeats (CRISPR)-associated Csn2 protein revealed Ca2+-dependent double-stranded DNA binding activity. J. Biol. Chem., 286, 2011
3SO6	Crystal structure of the LDL receptor tail in complex with autosomal recessive hypercholesterolemia PTB domain 分子名称: LDL receptor adaptor protein, Low-density lipoprotein receptor 著者 Dvir, H, Zajonc, D.M. 登録日 2011-06-29 公開日 2012-04-18 最終更新日 2024-02-28 実験手法 X-RAY DIFFRACTION (1.37 Å) 主引用文献 Atomic structure of the autosomal recessive hypercholesterolemia phosphotyrosine-binding domain in complex with the LDL-receptor tail. Proc.Natl.Acad.Sci.USA, 109, 2012
3S4P	Crystal structure of the bacterial ribosomal decoding site complexed with an amphiphilic paromomycin O2''-ether analogue 分子名称: (1R,2R,3S,4R,6S)-4,6-diamino-2-{[3-O-(2,6-diamino-2,6-dideoxy-beta-L-idopyranosyl)-2-O-{2-[(2-phenylethyl)amino]ethyl}-beta-D-ribofuranosyl]oxy}-3-hydroxycyclohexyl 2-amino-2-deoxy-alpha-D-glucopyranoside, RNA (5'-R(P*GP*CP*GP*UP*CP*AP*CP*AP*CP*CP*GP*GP*UP*GP*AP*AP*GP*UP*CP*GP*C)-3') 著者 Szychowski, J, Kondo, J, Zahr, O, Auclair, K, Westhof, E, Hanessian, S, Keillor, J.W. 登録日 2011-05-20 公開日 2011-09-21 最終更新日 2023-11-01 実験手法 X-RAY DIFFRACTION (2.56 Å) 主引用文献 Inhibition of aminoglycoside-deactivating enzymes APH(3')-IIIa and AAC(6')-Ii by amphiphilic paromomycin O2''-ether analogues Chemmedchem, 6, 2011
3S5R	Crystal structure of a putative transcriptional regulator of the TETR family (SYN_02108) from Syntrophus aciditrophicus at 2.60 A resolution 分子名称: 1,2-ETHANEDIOL, DI(HYDROXYETHYL)ETHER, Transcriptional regulator TetR family 著者 Joint Center for Structural Genomics (JCSG) 登録日 2011-05-23 公開日 2011-06-15 最終更新日 2023-02-01 実験手法 X-RAY DIFFRACTION (2.6 Å) 主引用文献 Crystal structure of a Putative transcriptional regulator of the TetR family (SYN_02108) from Syntrophus aciditrophicus SB at 2.60 A resolution To be published
3SD2	Crystal structure of a putative member of duf3244 protein family (BT_3571) from Bacteroides thetaiotaomicron vpi-5482 at 1.40 A resolution 分子名称: Putative member of DUF3244 protein family 著者 Joint Center for Structural Genomics (JCSG) 登録日 2011-06-08 公開日 2011-06-29 最終更新日 2023-02-01 実験手法 X-RAY DIFFRACTION (1.4 Å) 主引用文献 Crystal structure of a Putative member of DUF3244 protein family (BT_3571) from Bacteroides thetaiotaomicron VPI-5482 at 1.40 A resolution To be published
3S6E	Crystal structure of a RNA binding motif protein 39 (RBM39) from Mus musculuS at 0.95 A resolution 分子名称: CITRIC ACID, GLYCEROL, RNA-binding protein 39 著者 Joint Center for Structural Genomics (JCSG), Partnership for T-Cell Biology (TCELL) 登録日 2011-05-25 公開日 2011-06-15 最終更新日 2023-02-01 実験手法 X-RAY DIFFRACTION (0.95 Å) 主引用文献 Crystal structure of a RNA binding motif protein 39 (RBM39) from Mus musculus at 0.95 A resolution To be published
3SDI	Structure of yeast 20S open-gate proteasome with Compound 20 分子名称: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, MAGNESIUM ION, N~4~-(2,2-dimethylpropyl)-N~1~-{(2S)-1-[(4-methylbenzyl)amino]-1-oxo-4-phenylbutan-2-yl}-N~2~-[(5-methyl-1,2-oxazol-3-yl)carbonyl]-L-aspartamide, ... 著者 Sintchak, M.D. 登録日 2011-06-09 公開日 2012-06-13 最終更新日 2023-09-13 実験手法 X-RAY DIFFRACTION (2.65 Å) 主引用文献 Optimization of a series of dipeptides with a P3 threonine residue as non-covalent inhibitors of the chymotrypsin-like activity of the human 20S proteasome. Bioorg.Med.Chem.Lett., 20, 2010
3SF8	Structural insights into thiol stabilization of DJ-1 分子名称: Protein DJ-1 著者 Premkumar, L, Dobaczewska, M.K, Riedl, S.J. 登録日 2011-06-13 公開日 2011-10-05 最終更新日 2023-12-06 実験手法 X-RAY DIFFRACTION (1.56 Å) 主引用文献 Identification of an artificial peptide motif that binds and stabilizes reduced human DJ-1. J.Struct.Biol., 176, 2011
3SFG	crystal structure of murine norovirus RNA dependent RNA polymerase in complex with 2thiouridine(2TU) 分子名称: 1-(beta-D-ribofuranosyl)-2-thioxo-2,3-dihydropyrimidin-4(1H)-one, GLYCEROL, MAGNESIUM ION, ... 著者 Kim, K.H, Alam, I. 登録日 2011-06-13 公開日 2012-05-09 実験手法 X-RAY DIFFRACTION (2.209 Å) 主引用文献 Crystal structures of murine norovirus-1 RNA-dependent RNA polymerase in complex with 2-thiouridine or ribavirin. Virology, 426, 2012
3SA3	Crystal structure of wild-type HIV-1 protease in complex with AG23 分子名称: ACETATE ION, N~2~-acetyl-N-[(2S,3R)-4-{(1,3-benzothiazol-6-ylsulfonyl)[(2S)-2-methylbutyl]amino}-3-hydroxy-1-phenylbutan-2-yl]-L-isoleucinamide, PHOSPHATE ION, ... 著者 Schiffer, C.A, Nalam, M.N.L. 登録日 2011-06-02 公開日 2012-06-06 最終更新日 2023-09-13 実験手法 X-RAY DIFFRACTION (1.65 Å) 主引用文献 Protease Inhibitors that protrude out from substrate envelope are more susceptible to developing drug resistance To be Published
2F88	Solution NMR structure of domain 5 from the Pyaiella littoralis (PL) group II intron 分子名称: D5-PL RNA RIBOZYME DOMAIN 著者 Dayie, K.T. 登録日 2005-12-02 公開日 2006-02-28 最終更新日 2024-05-29 実験手法 SOLUTION NMR 主引用文献 Structure of a self-splicing group II intron catalytic effector domain 5: parallels with spliceosomal U6 RNA Rna, 12, 2006
3SAB	Crystal structure of wild-type HIV-1 protease in complex with AF78 分子名称: 3-hydroxy-N-[(2S,3R)-3-hydroxy-4-{[(4-methoxyphenyl)sulfonyl](3-phenylpropyl)amino}-1-phenylbutan-2-yl]benzamide, PHOSPHATE ION, Protease 著者 Schiffer, C.A, Nalam, M.N.L. 登録日 2011-06-02 公開日 2012-06-06 最終更新日 2023-09-13 実験手法 X-RAY DIFFRACTION (1.5 Å) 主引用文献 Protease Inhibitors that protrude out from substrate envelope are more susceptible to developing drug resistance To be Published
8G6B	Crystal structure of PfAMA1-RON2L chimera 分子名称: Apical membrane antigen 1, rhoptry neck protein 2 chimera, SULFATE ION 著者 Boulanger, M.J, Ramaswamy, R. 登録日 2023-02-14 公開日 2023-09-13 最終更新日 2024-02-14 実験手法 X-RAY DIFFRACTION (1.55 Å) 主引用文献 Structure guided mimicry of an essential P. falciparum receptor-ligand complex enhances cross neutralizing antibodies. Nat Commun, 14, 2023
3SG4	Crystal Structure of GCaMP3-D380Y, LP(linker 2) 分子名称: CALCIUM ION, Myosin light chain kinase, Green fluorescent protein, ... 著者 Schreiter, E.R, Akerboom, J, Looger, L.L. 登録日 2011-06-14 公開日 2012-06-20 最終更新日 2023-12-06 実験手法 X-RAY DIFFRACTION (2.4 Å) 主引用文献 Optimization of a GCaMP calcium indicator for neural activity imaging. J.Neurosci., 32, 2012
7VQ1	Structure of Apo-hsTRPM2 channel 分子名称: Transient receptor potential cation channel subfamily M member 2 著者 Yu, X.F, Xie, Y, Zhang, X.K, Ma, C, Guo, J.T, Yang, F, Yang, W. 登録日 2021-10-18 公開日 2021-12-22 最終更新日 2024-06-19 実験手法 ELECTRON MICROSCOPY (3.76 Å) 主引用文献 Structural and functional basis of the selectivity filter as a gate in human TRPM2 channel. Cell Rep, 37, 2021
3SMM	Crystal structure of human 14-3-3 sigma C38N/N166H in complex with task-3 peptide and stabilizer Fusicoccin J aglycone 分子名称: 14-3-3 protein sigma, CHLORIDE ION, Fusicoccin J aglycone, ... 著者 Anders, C, Schumacher, B, Ottmann, C. 登録日 2011-06-28 公開日 2012-07-11 最終更新日 2023-09-13 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 A semisynthetic fusicoccane stabilizes a protein-protein interaction and enhances the expression of K+ channels at the cell surface. Chem. Biol., 20, 2013

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