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4U52
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Crystal structure of Nagilactone C bound to the yeast 80S ribosome
分子名称: 18S ribosomal RNA, 25S ribosomal RNA, 40S ribosomal protein S0-A, ...
著者Garreau de Loubresse, N, Prokhorova, I, Yusupova, G, Yusupov, M.
登録日2014-07-24
公開日2014-10-22
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Structural basis for the inhibition of the eukaryotic ribosome.
Nature, 513, 2014
5W4U
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BU of 5w4u by Molmil
Pol II elongation complex with an N6-methyladenine-containing template
分子名称: 14mer non-template DNA, 29mer template DNA, 9mer RNA, ...
著者Wang, W, Wang, D.
登録日2017-06-13
公開日2018-06-20
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (3.6 Å)
主引用文献Epigenetic DNA Modification N6-Methyladenine Causes Site-Specific RNA Polymerase II Transcriptional Pausing.
J.Am.Chem.Soc., 139, 2017
4U4U
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BU of 4u4u by Molmil
Crystal structure of Lycorine bound to the yeast 80S ribosome
分子名称: (1S,2S,12bS,12cS)-2,4,5,7,12b,12c-hexahydro-1H-[1,3]dioxolo[4,5-j]pyrrolo[3,2,1-de]phenanthridine-1,2-diol, 18S ribosomal RNA, 25S ribosomal RNA, ...
著者Garreau de Loubresse, N, Prokhorova, I, Yusupova, G, Yusupov, M.
登録日2014-07-24
公開日2014-10-22
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Structural basis for the inhibition of the eukaryotic ribosome.
Nature, 513, 2014
6ZT1
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BU of 6zt1 by Molmil
Two states of a de novo hexameric coiled coil assembly CC-Type2-(LaIdGe)4
分子名称: CC-Type2-(LaIdGe)4
著者Rhys, G.G, Brady, R.L, Woolfson, D.N.
登録日2020-07-17
公開日2021-02-03
最終更新日2021-04-07
実験手法X-RAY DIFFRACTION (2.01 Å)
主引用文献Structural resolution of switchable states of a de novo peptide assembly.
Nat Commun, 12, 2021
7U47
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BU of 7u47 by Molmil
CryoEM structure of CENP-N promoted nucleosome stacks with CENP-A and palindromic alpha satellite DNA sequence
分子名称: Centromere protein N, DNA (147-MER), Histone H2A, ...
著者Zhou, K, Luger, K.
登録日2022-02-28
公開日2022-03-16
最終更新日2024-02-21
実験手法ELECTRON MICROSCOPY (7.5 Å)
主引用文献CENP-N promotes the compaction of centromeric chromatin.
Nat.Struct.Mol.Biol., 29, 2022
7U4D
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BU of 7u4d by Molmil
CryoEM structure of CENP-N promoted nucleosome stacks with CENP-A and 601 DNA sequence
分子名称: Centromere protein N, DNA (147-MER), Histone H2A, ...
著者Zhou, K, Luger, K.
登録日2022-02-28
公開日2022-03-30
最終更新日2024-02-21
実験手法ELECTRON MICROSCOPY (8.1 Å)
主引用文献CENP-N promotes the compaction of centromeric chromatin.
Nat.Struct.Mol.Biol., 29, 2022
7K26
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BU of 7k26 by Molmil
Crystal structure of Human H-chain Ferritin variant infused with Sodium Acrylate
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, FE (III) ION, Ferritin heavy chain, ...
著者Bailey, J.B, Zhang, L.
登録日2020-09-08
公開日2020-11-11
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Anisotropic Dynamics and Mechanics of Macromolecular Crystals Containing Lattice-Patterned Polymer Networks.
J.Am.Chem.Soc., 142, 2020
4U6F
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BU of 4u6f by Molmil
Crystal structure of T-2 toxin bound to the yeast 80S ribosome
分子名称: 12,13-Epoxytrichothec-9-ene-3,4,8,15-tetrol-4,15-diacetate-8-isovalerate, 18S ribosomal RNA, 25S ribosomal RNA, ...
著者Garreau de Loubresse, N, Prokhorova, I, Yusupova, G, Yusupov, M.
登録日2014-07-28
公開日2014-10-22
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (3.1 Å)
主引用文献Structural basis for the inhibition of the eukaryotic ribosome.
Nature, 513, 2014
2X4M
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BU of 2x4m by Molmil
Yersinia Pestis Plasminogen Activator Pla
分子名称: (HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE, COAGULASE/FIBRINOLYSIN, SULFATE ION
著者Eren, E, Murphy, M, Goguen, J, van den Berg, B.
登録日2010-02-05
公開日2010-07-28
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (2.55 Å)
主引用文献An Active Site Water Network in the Plasminogen Activator Pla from Yersinia Pestis
Structure, 18, 2010
4U4N
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BU of 4u4n by Molmil
Crystal structure of Edeine bound to the yeast 80S ribosome
分子名称: 18S ribosomal RNA, 25S ribosomal RNA, 40S ribosomal protein S0-A, ...
著者Garreau de Loubresse, N, Prokhorova, I, Yusupova, G, Yusupov, M.
登録日2014-07-24
公開日2014-10-22
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (3.1 Å)
主引用文献Structural basis for the inhibition of the eukaryotic ribosome.
Nature, 513, 2014
5LE6
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BU of 5le6 by Molmil
Crystal structure of DARPin-DARPin rigid fusion, variant DD_D12_09_D12
分子名称: DD_D12_09_D12, GLYCEROL, SULFATE ION
著者Batyuk, A, Wu, Y, Mittl, P.R, Plueckthun, A.
登録日2016-06-29
公開日2017-08-02
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Rigidly connected multispecific artificial binders with adjustable geometries.
Sci Rep, 7, 2017
6IR9
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BU of 6ir9 by Molmil
RNA polymerase II elongation complex bound with Elf1 and Spt4/5, stalled at SHL(-1) of the nucleosome
分子名称: DNA (198-MER), DNA-directed RNA polymerase subunit, DNA-directed RNA polymerase subunit beta, ...
著者Ehara, H, Kujirai, T, Fujino, Y, Shirouzu, M, Kurumizaka, H, Sekine, S.
登録日2018-11-12
公開日2019-02-20
最終更新日2024-03-27
実験手法ELECTRON MICROSCOPY (3.8 Å)
主引用文献Structural insight into nucleosome transcription by RNA polymerase II with elongation factors.
Science, 363, 2019
1TRO
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BU of 1tro by Molmil
CRYSTAL STRUCTURE OF TRP REPRESSOR OPERATOR COMPLEX AT ATOMIC RESOLUTION
分子名称: DNA (5'-D(*TP*GP*TP*AP*CP*TP*AP*GP*TP*TP*AP*AP*CP*TP*AP*GP*T P*AP*C)-3'), PROTEIN (TRP REPRESSOR), TRYPTOPHAN
著者Otwinowski, Z, Schevitz, R.W, Zhang, R.-G, Lawson, C.L, Joachimiak, A, Marmorstein, R, Luisi, B.F, Sigler, P.B.
登録日1992-08-30
公開日1994-01-31
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Crystal structure of trp repressor/operator complex at atomic resolution.
Nature, 335, 1988
6INQ
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BU of 6inq by Molmil
RNA polymerase II elongation complex stalled at SHL(-1) of the nucleosome, with foreign DNA (+1 position)
分子名称: DNA (198-MER), DNA (31-MER), DNA-directed RNA polymerase subunit, ...
著者Kujirai, T, Ehara, H, Fujino, Y, Shirouzu, M, Sekine, S, Kurumizaka, H.
登録日2018-10-26
公開日2019-04-03
最終更新日2024-03-27
実験手法ELECTRON MICROSCOPY (6.9 Å)
主引用文献Structural basis of the nucleosome transition during RNA polymerase II passage.
Science, 362, 2018
5LYZ
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BU of 5lyz by Molmil
Real-space refinement of the structure of hen egg-white lysozyme
分子名称: HEN EGG WHITE LYSOZYME
著者Diamond, R, Phillips, D.C, Blake, C.C.F, North, A.C.T.
登録日1975-02-01
公開日1977-04-12
最終更新日2017-11-29
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Real-space refinement of the structure of hen egg-white lysozyme.
J.Mol.Biol., 82, 1974
5M3F
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BU of 5m3f by Molmil
Yeast RNA polymerase I elongation complex at 3.8A
分子名称: DNA-directed RNA polymerase I subunit RPA12, DNA-directed RNA polymerase I subunit RPA135, DNA-directed RNA polymerase I subunit RPA14, ...
著者Neyer, S, Kunz, M, Geiss, C, Hantsche, M, Hodirnau, V.-V, Seybert, A, Engel, C, Scheffer, M.P, Cramer, P, Frangakis, A.S.
登録日2016-10-14
公開日2016-11-23
最終更新日2019-12-11
実験手法ELECTRON MICROSCOPY (3.8 Å)
主引用文献Structure of RNA polymerase I transcribing ribosomal DNA genes.
Nature, 540, 2016
5M3M
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BU of 5m3m by Molmil
Free monomeric RNA polymerase I at 4.0A resolution
分子名称: DNA-directed RNA polymerase I subunit RPA12, DNA-directed RNA polymerase I subunit RPA135, DNA-directed RNA polymerase I subunit RPA14, ...
著者Neyer, S, Kunz, M, Geiss, C, Hantsche, M, Hodirnau, V.-V, Seybert, A, Engel, C, Scheffer, M.P, Cramer, P, Frangakis, A.S.
登録日2016-10-15
公開日2016-11-23
最終更新日2024-05-15
実験手法ELECTRON MICROSCOPY (4 Å)
主引用文献Structure of RNA polymerase I transcribing ribosomal DNA genes.
Nature, 540, 2016
7KEE
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BU of 7kee by Molmil
RNA polymerase II elongation complex with unnatural base dTPT3, rNaMTP bound to E-site
分子名称: (1S)-1,4-anhydro-5-O-[(R)-hydroxy{[(S)-hydroxy(phosphonooxy)phosphoryl]oxy}phosphoryl]-1-(3-methoxynaphthalen-2-yl)-D-ribitol, DNA-directed RNA polymerase II subunit RPB1, DNA-directed RNA polymerase II subunit RPB11, ...
著者Oh, J, Wang, D.
登録日2020-10-10
公開日2021-06-23
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (3.45 Å)
主引用文献Transcriptional processing of an unnatural base pair by eukaryotic RNA polymerase II.
Nat.Chem.Biol., 17, 2021
7JRE
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BU of 7jre by Molmil
Crystal structure of EV-D68 2A protease C107A mutant
分子名称: Protease 2A, ZINC ION
著者Liu, C, Lee, M.-Y, Liu, W, Wang, J.
登録日2020-08-12
公開日2021-08-25
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Crystal structure of EV-D68 2A protease C107A mutant
To Be Published
6WRU
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BU of 6wru by Molmil
Structure of the 50S subunit of the ribosome from Methicillin Resistant Staphylococcus aureus in complex with an isomer of the tedizolid
分子名称: 23S rRNA, 50S ribosomal protein L13, 50S ribosomal protein L14, ...
著者Belousoff, M.J.
登録日2020-04-30
公開日2020-06-03
最終更新日2020-12-16
実験手法ELECTRON MICROSCOPY (3.1 Å)
主引用文献Characterization of the Core Ribosomal Binding Region for the Oxazolidone Family of Antibiotics Using Cryo-EM.
Acs Pharmacol Transl Sci, 3, 2020
5H4P
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BU of 5h4p by Molmil
Structural snapshot of cytoplasmic pre-60S ribosomal particles bound with Nmd3, Lsg1, Tif6 and Reh1
分子名称: 25S ribosomal RNA, 5.8S ribosomal RNA, 5S ribosomal RNA, ...
著者Ma, C, Wu, S, Li, N, Chen, Y, Yan, K, Li, Z, Zheng, L, Lei, J, Woolford, J.L, Gao, N.
登録日2016-11-01
公開日2017-01-25
最終更新日2024-03-20
実験手法ELECTRON MICROSCOPY (3.07 Å)
主引用文献Structural snapshot of cytoplasmic pre-60S ribosomal particles bound by Nmd3, Lsg1, Tif6 and Reh1
Nat. Struct. Mol. Biol., 24, 2017
6WJE
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BU of 6wje by Molmil
Copper resistance protein copG- Form 2
分子名称: ACETATE ION, COPPER (II) ION, DUF411 domain-containing protein, ...
著者Hausrath, A.C, Ly, A.T, McEvoy, M.M.
登録日2020-04-13
公開日2020-06-24
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献The bacterial copper resistance protein CopG contains a cysteine-bridged tetranuclear copper cluster.
J.Biol.Chem., 295, 2020
6WQN
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BU of 6wqn by Molmil
Structure of the 50S subunit of the ribosome from Methicillin Resistant Staphylococcus aureus in complex with the antibiotic, contezolid
分子名称: 23S rRNA, 50S ribosomal protein L13, 50S ribosomal protein L14, ...
著者Belousoff, M.J.
登録日2020-04-29
公開日2020-06-03
最終更新日2020-12-16
実験手法ELECTRON MICROSCOPY (2.9 Å)
主引用文献Characterization of the Core Ribosomal Binding Region for the Oxazolidone Family of Antibiotics Using Cryo-EM.
Acs Pharmacol Transl Sci, 3, 2020
6NMR
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BU of 6nmr by Molmil
Blocking Fab 119 anti-SIRP-alpha antibody in complex with SIRP-alpha Variant 1
分子名称: Fab 119 anti-SIRP-alpha antibody Variable Heavy Chain, Fab 119 anti-SIRP-alpha antibody Variable Light Chain, Tyrosine-protein phosphatase non-receptor type substrate 1
著者Wibowo, A.S, Carter, J.J, Sim, J.
登録日2019-01-11
公開日2019-08-07
最終更新日2019-08-14
実験手法X-RAY DIFFRACTION (2.42 Å)
主引用文献Discovery of high affinity, pan-allelic, and pan-mammalian reactive antibodies against the myeloid checkpoint receptor SIRP alpha.
Mabs, 11, 2019
5NG6
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BU of 5ng6 by Molmil
Crystal structure of FnCas12a bound to a crRNA
分子名称: CRISPR-associated endonuclease Cpf1, MAGNESIUM ION, crRNA
著者Swarts, D.C, van der Oost, J, Jinek, M.
登録日2017-03-16
公開日2017-06-14
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (3.342 Å)
主引用文献Structural Basis for Guide RNA Processing and Seed-Dependent DNA Targeting by CRISPR-Cas12a.
Mol. Cell, 66, 2017

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件を2024-08-07に公開中

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