PDB: 356 件ウェブページステータス検索Chemie searchBIRD

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3KV4	Structure of PHF8 in complex with histone H3 分子名称: 1,2-ETHANEDIOL, FE (II) ION, Histone H3-like, ... 著者 Horton, J.R, Upadhyay, A.K, Qi, H.H, Zhang, X, Shi, Y, Cheng, X. 登録日 2009-11-29 公開日 2009-12-22 最終更新日 2023-09-06 実験手法 X-RAY DIFFRACTION (2.19 Å) 主引用文献 Enzymatic and structural insights for substrate specificity of a family of jumonji histone lysine demethylases. Nat.Struct.Mol.Biol., 17, 2010
3KVA	Structure of KIAA1718 Jumonji domain in complex with alpha-ketoglutarate 分子名称: 2-OXOGLUTARIC ACID, FE (II) ION, JmjC domain-containing histone demethylation protein 1D, ... 著者 Horton, J.R, Upadhyay, A.K, Qi, H.H, Zhang, X, Shi, Y, Cheng, X. 登録日 2009-11-29 公開日 2009-12-22 最終更新日 2023-09-06 実験手法 X-RAY DIFFRACTION (2.79 Å) 主引用文献 Enzymatic and structural insights for substrate specificity of a family of jumonji histone lysine demethylases. Nat.Struct.Mol.Biol., 17, 2010
3KV5	Structure of KIAA1718, human Jumonji demethylase, in complex with N-oxalylglycine 分子名称: FE (II) ION, JmjC domain-containing histone demethylation protein 1D, N-OXALYLGLYCINE, ... 著者 Horton, J.R, Upadhyay, A.K, Qi, H.H, Zhang, X, Shi, Y, Cheng, X. 登録日 2009-11-29 公開日 2009-12-22 最終更新日 2023-09-06 実験手法 X-RAY DIFFRACTION (2.39 Å) 主引用文献 Enzymatic and structural insights for substrate specificity of a family of jumonji histone lysine demethylases. Nat.Struct.Mol.Biol., 17, 2010
2QQR	JMJD2A hybrid tudor domains 分子名称: JmjC domain-containing histone demethylation protein 3A, SULFATE ION 著者 Lee, J, Botuyan, M.V, Mer, G. 登録日 2007-07-26 公開日 2007-12-11 最終更新日 2024-11-06 実験手法 X-RAY DIFFRACTION (1.8 Å) 主引用文献 Distinct binding modes specify the recognition of methylated histones H3K4 and H4K20 by JMJD2A-tudor. Nat.Struct.Mol.Biol., 15, 2008
2QQS	JMJD2A tandem tudor domains in complex with a trimethylated histone H4-K20 peptide 分子名称: JmjC domain-containing histone demethylation protein 3A, METHYLATED HISTONE H4 PEPTIDE 著者 Lee, J, Botuyan, M.V, Mer, G. 登録日 2007-07-26 公開日 2007-12-11 最終更新日 2023-08-30 実験手法 X-RAY DIFFRACTION (2.82 Å) 主引用文献 Distinct binding modes specify the recognition of methylated histones H3K4 and H4K20 by JMJD2A-tudor. Nat.Struct.Mol.Biol., 15, 2008
5Y20	Crystal structure of AL1 PHD finger bound to H3K4me3 分子名称: PEPTIDE FROM HISTONE H3, PHD finger protein ALFIN-LIKE 1, ZINC ION 著者 Zhao, S, Zhang, B, Li, H. 登録日 2017-07-22 公開日 2018-01-24 最終更新日 2023-11-22 実験手法 X-RAY DIFFRACTION (2.409 Å) 主引用文献 Systematic Profiling of Histone Readers in Arabidopsis thaliana. Cell Rep, 22, 2018
5WLF	Crystal structure of the apo PPS PHD finger 分子名称: GLYCEROL, Protein partner of snf, isoform A, ... 著者 Klein, B.J, Kutateladze, T.G. 登録日 2017-07-26 公開日 2017-10-04 最終更新日 2023-10-04 実験手法 X-RAY DIFFRACTION (1.4 Å) 主引用文献 A Unique pH-Dependent Recognition of Methylated Histone H3K4 by PPS and DIDO. Structure, 25, 2017
2KYU	The solution structure of the PHD3 finger of MLL 分子名称: Histone-lysine N-methyltransferase MLL, ZINC ION 著者 Park, S, Bushweller, J.H. 登録日 2010-06-08 公開日 2010-08-25 最終更新日 2024-05-01 実験手法 SOLUTION NMR 主引用文献 The PHD3 domain of MLL acts as a CYP33-regulated switch between MLL-mediated activation and repression. Biochemistry, 49, 2010
2RR4	Complex structure of the zf-CW domain and the H3K4me3 peptide 分子名称: Histone H3, ZINC ION, Zinc finger CW-type PWWP domain protein 1 著者 He, F, Muto, Y, Inoue, M, Kigawa, T, Shirouzu, M, Terada, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI) 登録日 2010-03-24 公開日 2010-09-15 最終更新日 2025-03-26 実験手法 SOLUTION NMR 主引用文献 Structural insight into the zinc finger CW domain as a histone modification reader Structure, 18, 2010
3LX7	Crystal structure of a Novel Tudor domain-containing protein SGF29 分子名称: SAGA-associated factor 29 homolog, SULFATE ION, UNKNOWN ATOM OR ION 著者 Bian, C.B, Xu, C, Tempel, W, Lam, R, Bountra, C, Arrowsmith, C.H, Weigelt, J, Edwards, A.M, Bochkarev, A, Min, J. 登録日 2010-02-24 公開日 2010-05-05 最終更新日 2023-09-06 実験手法 X-RAY DIFFRACTION (1.78 Å) 主引用文献 Sgf29 binds histone H3K4me2/3 and is required for SAGA complex recruitment and histone H3 acetylation. Embo J., 30, 2011
3LQJ	Crystal structure of MLL1 PHD3-Bromo complexed with H3(1-9)K4me3 peptide 分子名称: Histone H3, MLL1 PHD3-Bromo, ZINC ION 著者 Wang, Z, Patel, D.J. 登録日 2010-02-09 公開日 2010-07-07 最終更新日 2025-03-26 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 Pro isomerization in MLL1 PHD3-bromo cassette connects H3K4me readout to CyP33 and HDAC-mediated repression. Cell(Cambridge,Mass.), 141, 2010
3MEW	Crystal structure of Novel Tudor domain-containing protein SGF29 分子名称: SAGA-associated factor 29 homolog 著者 Xu, C, Bian, C.B, Lam, R, Bountra, C, Arrowsmith, C.H, Weigelt, J, Edwards, A.M, Bochkarev, A, Min, J, Structural Genomics Consortium (SGC) 登録日 2010-03-31 公開日 2010-04-28 最終更新日 2023-09-06 実験手法 X-RAY DIFFRACTION (1.92 Å) 主引用文献 Sgf29 binds histone H3K4me2/3 and is required for SAGA complex recruitment and histone H3 acetylation. Embo J., 30, 2011
3LQH	Crystal structure of MLL1 PHD3-Bromo in the free form 分子名称: Histone-lysine N-methyltransferase MLL, ZINC ION 著者 Wang, Z, Patel, D.J. 登録日 2010-02-09 公開日 2010-07-07 最終更新日 2024-02-21 実験手法 X-RAY DIFFRACTION (1.72 Å) 主引用文献 Pro isomerization in MLL1 PHD3-bromo cassette connects H3K4me readout to CyP33 and HDAC-mediated repression. Cell(Cambridge,Mass.), 141, 2010
3LQI	Crystal structure of MLL1 PHD3-Bromo complexed with H3(1-9)K4me2 peptide 分子名称: Histone H3, MLL1 PHD3-Bromo, ZINC ION 著者 Wang, Z, Patel, D.J. 登録日 2010-02-09 公開日 2010-07-07 最終更新日 2023-09-06 実験手法 X-RAY DIFFRACTION (1.92 Å) 主引用文献 Pro isomerization in MLL1 PHD3-bromo cassette connects H3K4me readout to CyP33 and HDAC-mediated repression. Cell(Cambridge,Mass.), 141, 2010
3MEU	Crystal structure of SGF29 in complex with H3R2me2sK4me3 分子名称: Histone H3, SAGA-associated factor 29 homolog, SULFATE ION 著者 Bian, C.B, Xu, C, Bountra, C, Arrowsmith, C.H, Weigelt, J, Edwards, A.M, Bochkarev, A, Min, J, Structural Genomics Consortium (SGC) 登録日 2010-03-31 公開日 2010-04-28 最終更新日 2023-11-22 実験手法 X-RAY DIFFRACTION (1.28 Å) 主引用文献 Sgf29 binds histone H3K4me2/3 and is required for SAGA complex recruitment and histone H3 acetylation. Embo J., 30, 2011
3MET	Crystal structure of SGF29 in complex with H3K4me2 分子名称: GLYCEROL, Histone H3, SAGA-associated factor 29 homolog, ... 著者 Bian, C.B, Xu, C, Lam, R, Bountra, C, Arrowsmith, C.H, Weigelt, J, Edwards, A.M, Bochkarev, A, Min, J, Structural Genomics Consortium (SGC) 登録日 2010-03-31 公開日 2010-04-28 最終更新日 2025-03-26 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Sgf29 binds histone H3K4me2/3 and is required for SAGA complex recruitment and histone H3 acetylation. Embo J., 30, 2011
3MEV	Crystal structure of SGF29 in complex with R2AK4me3 分子名称: GLYCEROL, Histone H3, SAGA-associated factor 29 homolog, ... 著者 Bian, C.B, Xu, C, Lam, R, Bountra, C, Arrowsmith, C.H, Weigelt, J, Edwards, A.M, Bochkarev, A, Min, J, Structural Genomics Consortium (SGC) 登録日 2010-03-31 公開日 2010-04-28 最終更新日 2021-10-06 実験手法 X-RAY DIFFRACTION (1.83 Å) 主引用文献 Sgf29 binds histone H3K4me2/3 and is required for SAGA complex recruitment and histone H3 acetylation. Embo J., 30, 2011
5JSG	Crystal structure of Spindlin1 bound to compound EML405 分子名称: CHLORIDE ION, MAGNESIUM ION, Spindlin-1, ... 著者 Su, X, Li, H. 登録日 2016-05-08 公開日 2017-05-10 最終更新日 2024-03-20 実験手法 X-RAY DIFFRACTION (2.5 Å) 主引用文献 Developing Spindlin1 small-molecule inhibitors by using protein microarrays Nat. Chem. Biol., 13, 2017
5JSJ	Crystal structure of Spindlin1 bound to compound EML631 分子名称: CHLORIDE ION, MAGNESIUM ION, Spindlin-1, ... 著者 Su, X, Li, H. 登録日 2016-05-08 公開日 2017-05-24 最終更新日 2024-03-20 実験手法 X-RAY DIFFRACTION (2.348 Å) 主引用文献 Developing Spindlin1 small-molecule inhibitors by using protein microarrays Nat. Chem. Biol., 13, 2017
9QLM	Solution structure of the TAF3-PHD bound to a H3K4me3Q5ser histone tail peptide with a serotonylated glutamine 分子名称: Histone H3.1, SEROTONIN, Transcription initiation factor TFIID subunit 3, ... 著者 van Ingen, H, Gielingh, H, Pulido-Cortes, L, Thijssen, V, Timmers, H.Th.M, Jongkees, S, Honorato, R.V, Bonvin, A.M.J.J, Liu, M, Yoshisada, R, Soares, L.R. 登録日 2025-03-21 公開日 2025-05-14 実験手法 SOLUTION NMR 主引用文献 Molecular determinants for recognition of serotonylated chromatin To Be Published
3SOW	Structure of UHRF1 PHD finger in complex with histone H3K4me3 1-9 peptide 分子名称: E3 ubiquitin-protein ligase UHRF1, Histone H3, ZINC ION 著者 Rajakumara, E, Patel, D.J. 登録日 2011-06-30 公開日 2011-08-03 最終更新日 2023-09-13 実験手法 X-RAY DIFFRACTION (1.9501 Å) 主引用文献 PHD Finger Recognition of Unmodified Histone H3R2 Links UHRF1 to Regulation of Euchromatic Gene Expression. Mol.Cell, 43, 2011
3MP6	Complex Structure of Sgf29 and dimethylated H3K4 分子名称: H3K4me2 peptide, Maltose-binding periplasmic protein,LINKER,SAGA-associated factor 29, alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose 著者 Li, J, Wu, M, Ruan, J, Zang, J. 登録日 2010-04-25 公開日 2011-05-04 最終更新日 2023-11-01 実験手法 X-RAY DIFFRACTION (1.48 Å) 主引用文献 Sgf29 binds histone H3K4me2/3 and is required for SAGA complex recruitment and histone H3 acetylation Embo J., 30, 2011
3MP8	Crystal structure of Sgf29 tudor domain 分子名称: 4-(HYDROXYMETHYL)BENZAMIDINE, ACETIC ACID, GLYCEROL, ... 著者 Li, J, Wu, M, Ruan, J, Zang, J. 登録日 2010-04-26 公開日 2011-05-04 最終更新日 2023-11-01 実験手法 X-RAY DIFFRACTION (1.92 Å) 主引用文献 Sgf29 binds histone H3K4me2/3 and is required for SAGA complex recruitment and histone H3 acetylation Embo J., 30, 2011
3QZV	Crystal Structure of BPTF PHD-linker-bromo in complex with histone H4K12ac peptide 分子名称: Histone H4, Nucleosome-remodeling factor subunit BPTF, ZINC ION 著者 Li, H, Ruthenburg, A.J, Patel, D.J. 登録日 2011-03-07 公開日 2011-06-01 最終更新日 2024-11-27 実験手法 X-RAY DIFFRACTION (1.999 Å) 主引用文献 Recognition of a Mononucleosomal Histone Modification Pattern by BPTF via Multivalent Interactions. Cell(Cambridge,Mass.), 145, 2011
5Y5W	Crystal structure of human Spindlin1 in complex with a histone H4K20(me3) peptide 分子名称: Histone peptide H4K20(me3), Spindlin-1 著者 Wang, C, Zang, J. 登録日 2017-08-10 公開日 2017-10-11 最終更新日 2023-11-22 実験手法 X-RAY DIFFRACTION (3.3 Å) 主引用文献 Spindlin-1 recognizes methylations of K20 and R23 of histone H4 tail FEBS Lett., 592, 2018

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