PDB: 243531 件ウェブページステータス検索Chemie searchBIRD

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9S5G	Temporizin-1 NMR analysis 分子名称: Temporizin-1 著者 Falcigno, L, D'Auria, G, Galdiero, S, Falanga, A, Bellavita, R. 登録日 2025-07-29 公開日 2025-09-17 最終更新日 2025-10-08 実験手法 SOLUTION NMR 主引用文献 Temporizin-1 Meets the Membranes: Probing Membrane Inser-Tion and Disruption Mechanisms. Antibiotics, 14, 2025
7DD4	Solution structure of an RNA derived from the joint region of the TAR and PolyA stems of HIV-1 genomic RNA 分子名称: RNA (36-MER) 著者 Obayashi, C.M, Shinohara, Y, Masuda, T, Kawai, G. 登録日 2020-10-27 公開日 2021-06-09 最終更新日 2024-05-15 実験手法 SOLUTION NMR 主引用文献 Influence of the 5'-terminal sequences on the 5'-UTR structure of HIV-1 genomic RNA. Sci Rep, 11, 2021
6W1D	Structure of human mitochondrial complex Nfs1-ISCU2 (WT)-ISD11 with E.coli ACP1 at 1.8 A resolution (NIAU)2 分子名称: 1,2-ETHANEDIOL, 2,3-DIHYDROXY-1,4-DITHIOBUTANE, 2,5,8,11,14,17-HEXAOXANONADECAN-19-OL, ... 著者 Boniecki, M.T, Cygler, M. 登録日 2020-03-04 公開日 2020-03-18 最終更新日 2023-10-18 実験手法 X-RAY DIFFRACTION (1.795 Å) 主引用文献 The essential function of ISCU2 and its conserved N-terminus in Fe/S cluster biogenesis To Be Published
8SW6	Protein Phosphatase 1 in complex with PP1-specific Phosphatase targeting peptide (PhosTAP) version 3 分子名称: CHLORIDE ION, MANGANESE (II) ION, PP1-specific Phosphatase-Targeting Peptide version 3, ... 著者 Choy, M.S, Peti, W, Page, R. 登録日 2023-05-17 公開日 2024-05-29 最終更新日 2024-11-06 実験手法 X-RAY DIFFRACTION (1.76 Å) 主引用文献 A protein phosphatase 1 specific phos phatase ta rgeting p eptide (PhosTAP) to identify the PP1 phosphatome. Proc.Natl.Acad.Sci.USA, 121, 2024
6W0Q	APE1 endonuclease product complex D148E 分子名称: 1,2-ETHANEDIOL, DI(HYDROXYETHYL)ETHER, DNA (5'-D(*GP*CP*TP*GP*AP*TP*GP*CP*GP*C)-3'), ... 著者 Freudenthal, B.D, Whitaker, A.M. 登録日 2020-03-02 公開日 2020-06-10 最終更新日 2023-10-11 実験手法 X-RAY DIFFRACTION (1.89 Å) 主引用文献 Molecular and structural characterization of disease-associated APE1 polymorphisms. DNA Repair (Amst.), 91-92, 2020
7OKP	Crystal structure of mouse CARM1 in complex with histone H3_13-22 K18 acetylated 分子名称: (2~{R},3~{R},4~{S},5~{R})-2-(6-aminopurin-9-yl)-5-[(~{E})-prop-1-enyl]oxolane-3,4-diol, Histone H3.3, Histone-arginine methyltransferase CARM1, ... 著者 Marechal, N, Cura, V, Troffer-Charlier, N, Bonnefond, L, Cavarelli, J. 登録日 2021-05-18 公開日 2021-10-27 最終更新日 2024-11-06 実験手法 X-RAY DIFFRACTION (2.2 Å) 主引用文献 Structural Studies Provide New Insights into the Role of Lysine Acetylation on Substrate Recognition by CARM1 and Inform the Design of Potent Peptidomimetic Inhibitors. Chembiochem, 22, 2021
7OS4	Crystal structure of mouse CARM1 in complex with histone H3_13-31 K18 分子名称: (2~{R},3~{R},4~{S},5~{R})-2-(6-aminopurin-9-yl)-5-[(~{E})-prop-1-enyl]oxolane-3,4-diol, Histone H3.1, Histone-arginine methyltransferase CARM1 著者 Marechal, N, Cura, V, Troffer-Charlier, N, Bonnefond, L, Cavarelli, J. 登録日 2021-06-07 公開日 2021-10-27 最終更新日 2024-11-13 実験手法 X-RAY DIFFRACTION (2.54 Å) 主引用文献 Structural Studies Provide New Insights into the Role of Lysine Acetylation on Substrate Recognition by CARM1 and Inform the Design of Potent Peptidomimetic Inhibitors. Chembiochem, 22, 2021
7MLX	SARS-CoV-2 programmed -1 frameshifting element three stem H-type pseudoknot 分子名称: BL3-6 Fab Heavy Chain, BL3-6 Fab Light Chain, RNA (65-MER) 著者 Roman, C, Lewicka, A. 登録日 2021-04-29 公開日 2021-08-11 最終更新日 2024-11-06 実験手法 X-RAY DIFFRACTION (2.09 Å) 主引用文献 The SARS-CoV-2 Programmed -1 Ribosomal Frameshifting Element Crystal Structure Solved to 2.09 angstrom Using Chaperone-Assisted RNA Crystallography. Acs Chem.Biol., 16, 2021
8F11	T4 lysozyme with a 2,6-diazaadamantane nitroxide (DZD) spin label 分子名称: 1-[(1r,3r,5r,7r)-6-hydroxy-2,6-diazatricyclo[3.3.1.1~3,7~]decan-2-yl]ethan-1-one, BETA-MERCAPTOETHANOL, CHLORIDE ION, ... 著者 Wilson, M.A, Madzelan, P, Rajca, A, Stein, R, Yang, Z. 登録日 2022-11-04 公開日 2023-02-15 最終更新日 2023-12-13 実験手法 X-RAY DIFFRACTION (1.12 Å) 主引用文献 Cucurbit[7]uril Enhances Distance Measurements of Spin-Labeled Proteins. J.Am.Chem.Soc., 145, 2023
6W0Y	Structure of KHK in complex with compound 6 (2-[(1~{R},5~{S})-3-[5-cyano-6-[(2~{S},3~{R})-2-methyl-3-oxidanyl-azetidin-1-yl]-4-(trifluoromethyl)pyridin-2-yl]-3-azabicyclo[3.1.0]hexan-6-yl]ethanoic acid) 分子名称: 2-[(1~{R},5~{S})-3-[5-cyano-6-[(2~{S},3~{R})-2-methyl-3-oxidanyl-azetidin-1-yl]-4-(trifluoromethyl)pyridin-2-yl]-3-azabicyclo[3.1.0]hexan-6-yl]ethanoic acid, Ketohexokinase, SULFATE ION 著者 Jasti, J. 登録日 2020-03-03 公開日 2020-09-23 最終更新日 2023-10-11 実験手法 X-RAY DIFFRACTION (2.54 Å) 主引用文献 Discovery of PF-06835919: A Potent Inhibitor of Ketohexokinase (KHK) for the Treatment of Metabolic Disorders Driven by the Overconsumption of Fructose. J.Med.Chem., 63, 2020
7OCT	NADPH bound to the dehydrogenase domain of the bifunctional mannitol-1-phosphate dehydrogenase/phosphatase MtlD-N374A from Acinetobacter baumannii 分子名称: 1,2-ETHANEDIOL, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, ACETATE ION, ... 著者 Tam, H.K, Mueller, V, Pos, K.M. 登録日 2021-04-28 公開日 2022-04-20 最終更新日 2024-01-31 実験手法 X-RAY DIFFRACTION (2.85 Å) 主引用文献 Unidirectional mannitol synthesis of Acinetobacter baumannii MtlD is facilitated by the helix-loop-helix-mediated dimer formation. Proc.Natl.Acad.Sci.USA, 119, 2022
7ALU	NMR structure of a DNA G-quadruplex containing two SP1 binding sites from HIV-1 promoter 分子名称: DNA (5'-D(*AP*GP*GP*GP*AP*GP*GP*TP*GP*TP*GP*GP*CP*CP*TP*GP*GP*GP*CP*GP*GP*G)-3'), POTASSIUM ION 著者 De Rache, A, Marquevielle, J, Amrane, S. 登録日 2020-10-07 公開日 2022-06-01 最終更新日 2023-12-13 実験手法 SOLUTION NMR 主引用文献 Structure of a DNA G-quadruplex that modulates SP1 binding sites architecture in HIV-1 promoter. J.Mol.Biol., 2023
8EPV	2.2 A crystal structure of the lipocalin cat allergen Fel d 7 分子名称: 1,2-ETHANEDIOL, ACETATE ION, Fel d 7 allergen, ... 著者 Min, J, Pedersen, L.C, Geoffrey, M.A. 登録日 2022-10-06 公開日 2023-04-05 最終更新日 2024-11-13 実験手法 X-RAY DIFFRACTION (2.19 Å) 主引用文献 Structural and ligand binding analysis of the pet allergens Can f 1 and Fel d 7. Front Allergy, 4, 2023
6YKK	Neisseria gonorrhoeae Leucyl-tRNA Synthetase in Complex with Compound 15 分子名称: 1,2-ETHANEDIOL, Leucine--tRNA ligase, MAGNESIUM ION, ... 著者 Pang, L, Strelkov, S.V, Weeks, S.D. 登録日 2020-04-06 公開日 2020-12-02 最終更新日 2024-01-24 実験手法 X-RAY DIFFRACTION (2.236 Å) 主引用文献 Synthesis and structure-activity studies of novel anhydrohexitol-based Leucyl-tRNA synthetase inhibitors. Eur.J.Med.Chem., 211, 2021
6O3F	Crystal Structure of Lysyl-tRNA Synthetase from Chlamydia trachomatis with complexed with L-lysine and a difluoro cyclohexyl chromone ligand 分子名称: 1,2-ETHANEDIOL, DI(HYDROXYETHYL)ETHER, LYSINE, ... 著者 Seattle Structural Genomics Center for Infectious Disease (SSGCID) 登録日 2019-02-26 公開日 2019-03-27 最終更新日 2023-10-11 実験手法 X-RAY DIFFRACTION (2.4 Å) 主引用文献 Crystal Structure of Lysyl-tRNA Synthetase from Chlamydia trachomatis with complexed with L-lysine and a difluoro cyclohexyl chromone ligand to be published
6Y83	Capsid structure of Leishmania RNA virus 1 分子名称: Capsid protein 著者 Prochazkova, M, Fuzik, T, Grybtchuk, D, Falginella, F, Podesvova, L, Yurchenko, V, Vacha, R, Plevka, P. 登録日 2020-03-03 公開日 2020-11-11 最終更新日 2024-10-16 実験手法 ELECTRON MICROSCOPY (3.65 Å) 主引用文献 Capsid Structure of Leishmania RNA Virus 1. J.Virol., 95, 2021
8KB7	Crystal structure of UDP/mannose-bound AGO61/beta-1,4-N-Acetylglucosaminyltransferase 2 (POMGNT2) 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, CHLORIDE ION, Protein O-linked-mannose beta-1,4-N-acetylglucosaminyltransferase 2, ... 著者 Satoh, T, Umezawa, F, Yagi, H, Kato, K. 登録日 2023-08-04 公開日 2024-08-07 最終更新日 2024-10-30 実験手法 X-RAY DIFFRACTION (2.8 Å) 主引用文献 Crystal structure of UDP/mannose-bound AGO61/beta-1,4-N-Acetylglucosaminyltransferase 2 (POMGNT2) To Be Published
6NNH	Structure of Closed state of Dihydrofolate reductase from Mycobacterium tuberculosis in complex with NADPH and cycloguanil 分子名称: 1-(4-chlorophenyl)-6,6-dimethyl-1,6-dihydro-1,3,5-triazine-2,4-diamine, COBALT (II) ION, Dihydrofolate reductase, ... 著者 Giudice, J.H.P, Ribeiro, J.A, Dias, M.V.B. 登録日 2019-01-15 公開日 2019-07-17 最終更新日 2023-10-11 実験手法 X-RAY DIFFRACTION (1.523 Å) 主引用文献 Crystal structures of the closed form of Mycobacterium tuberculosis dihydrofolate reductase in complex with dihydrofolate and antifolates. Acta Crystallogr D Struct Biol, 75, 2019
8EQG	Human PU.1 ETS-Domain (165-270) Bound to d(AATAAA(DU)GGAAGTGGG) 分子名称: DNA (5'-D(*AP*AP*DU*AP*AP*AP*TP*GP*GP*AP*AP*GP*TP*GP*GP*G)-3'), DNA (5'-D(*TP*CP*CP*CP*AP*CP*TP*TP*CP*CP*AP*TP*TP*TP*AP*T)-3'), SODIUM ION, ... 著者 Terrell, J.R, Poon, G.M.K. 登録日 2022-10-07 公開日 2023-07-05 最終更新日 2023-10-25 実験手法 X-RAY DIFFRACTION (1.39 Å) 主引用文献 DNA selection by the master transcription factor PU.1. Cell Rep, 42, 2023
8EO4	Human PU.1 ETS-Domain (165-270) Bound to d(AATAAGCGGAAGTGGG) with Di-methylated CpG sites 分子名称: DNA (5'-D(*AP*AP*TP*AP*AP*GP*CP*GP*GP*AP*AP*GP*TP*GP*GP*G)-3'), DNA (5'-D(*TP*CP*CP*CP*AP*CP*TP*TP*CP*CP*GP*CP*TP*TP*AP*T)-3'), SODIUM ION, ... 著者 Terrell, J.R, Poon, G.M.K. 登録日 2022-10-02 公開日 2023-07-05 最終更新日 2023-10-25 実験手法 X-RAY DIFFRACTION (1.24 Å) 主引用文献 DNA selection by the master transcription factor PU.1. Cell Rep, 42, 2023
8EQK	Human PU.1 ETS-Domain (165-270) Bound to d(AATAACCGGAAGTGGG) 分子名称: DNA (5'-D(*AP*AP*TP*AP*AP*CP*CP*GP*GP*AP*AP*GP*TP*GP*GP*G)-3'), DNA (5'-D(*TP*CP*CP*CP*AP*CP*TP*TP*CP*CP*GP*GP*TP*TP*AP*T)-3'), SODIUM ION, ... 著者 Terrell, J.R, Poon, G.M.K. 登録日 2022-10-07 公開日 2023-07-05 最終更新日 2023-10-25 実験手法 X-RAY DIFFRACTION (1.45 Å) 主引用文献 DNA selection by the master transcription factor PU.1. Cell Rep, 42, 2023
8EQL	Human PU.1 ETS-Domain (165-270) Q226E Mutant Bound to d(AATAACCGGAAGTGGG) 分子名称: DNA (5'-D(*AP*AP*TP*AP*AP*CP*CP*GP*GP*AP*AP*GP*TP*GP*GP*G)-3'), DNA (5'-D(*TP*CP*CP*CP*AP*CP*TP*TP*CP*CP*GP*GP*TP*TP*AP*T)-3'), SODIUM ION, ... 著者 Terrell, J.R, Poon, G.M.K. 登録日 2022-10-07 公開日 2023-07-05 最終更新日 2023-10-25 実験手法 X-RAY DIFFRACTION (1.52 Å) 主引用文献 DNA selection by the master transcription factor PU.1. Cell Rep, 42, 2023
8D1R	Crystal structure of acetyltransferase Eis from Mycobacterium tuberculosis in complex with inhibitor SGT520 分子名称: 1-{3-[(4-chlorophenyl)methoxy]phenyl}methanamine, GLYCEROL, N-acetyltransferase Eis 著者 Pang, A.H, Punetha, A, Garneau-Tsodikova, S, Tsodikov, O.V. 登録日 2022-05-27 公開日 2022-09-14 最終更新日 2023-10-18 実験手法 X-RAY DIFFRACTION (2.19 Å) 主引用文献 Discovery of substituted benzyloxy-benzylamine inhibitors of acetyltransferase Eis and their anti-mycobacterial activity. Eur.J.Med.Chem., 242, 2022
8D25	Crystal structure of acetyltransferase Eis from Mycobacterium tuberculosis in complex with inhibitor SGT530 分子名称: 1-{2-[(3-chlorophenyl)methoxy]phenyl}-N-[(pyridin-4-yl)methyl]methanamine, GLYCEROL, N-acetyltransferase Eis 著者 Pang, A.H, Punetha, A, Garneau-Tsodikova, S, Tsodikov, O.V. 登録日 2022-05-27 公開日 2022-09-14 最終更新日 2023-10-18 実験手法 X-RAY DIFFRACTION (2.05 Å) 主引用文献 Discovery of substituted benzyloxy-benzylamine inhibitors of acetyltransferase Eis and their anti-mycobacterial activity. Eur.J.Med.Chem., 242, 2022
8EO1	Human PU.1 ETS-Domain (165-270) Bound to d(AATAAGCGGAAGTGGG) with Hemi-methylated CpG (reverse strand) 分子名称: DNA (5'-D(*AP*AP*TP*AP*AP*GP*CP*GP*GP*AP*AP*GP*TP*GP*GP*G)-3'), DNA (5'-D(*TP*CP*CP*CP*AP*CP*TP*TP*CP*GP*CP*TP*TP*AP*T)-3'), SODIUM ION, ... 著者 Terrell, J.R, Poon, G.M.K. 登録日 2022-10-01 公開日 2023-07-05 最終更新日 2023-10-25 実験手法 X-RAY DIFFRACTION (1.28 Å) 主引用文献 DNA selection by the master transcription factor PU.1. Cell Rep, 42, 2023

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