Loading
PDBj
メニューPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help

7OUB
DownloadVisualize
BU of 7oub by Molmil
High resolution structure of Alpha-1-acid glycoprotein bound to potent anti-tumour compound UCN-01
分子名称: 7-HYDROXYSTAUROSPORINE, Alpha-1-acid glycoprotein 2
著者Landin, E.J.B, Williams, C, Crump, M.P.
登録日2021-06-11
公開日2021-12-01
最終更新日2024-11-06
実験手法X-RAY DIFFRACTION (1.82 Å)
主引用文献The structural basis for high affinity binding of alpha 1-acid glycoprotein to the potent antitumor compound UCN-01.
J.Biol.Chem., 297, 2021
8T7C
DownloadVisualize
BU of 8t7c by Molmil
Crystal structure of human phospholipase C gamma 2
分子名称: 1,2-ETHANEDIOL, 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-2, CALCIUM ION
著者Chen, Y, Choi, H, Zhuang, N, Hu, L, Qian, D, Wang, J.
登録日2023-06-20
公開日2024-06-26
最終更新日2024-12-11
実験手法X-RAY DIFFRACTION (2.55 Å)
主引用文献The crystal and cryo-EM structures of PLC gamma 2 reveal dynamic interdomain recognitions in autoinhibition.
Sci Adv, 10, 2024
6Q8M
DownloadVisualize
BU of 6q8m by Molmil
GH10 endo-xylanase
分子名称: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, Beta-xylanase, ...
著者Davies, G.J, Rowland, R.J, Wu, L, Moroz, O, Blagova, E.
登録日2018-12-15
公開日2019-06-05
最終更新日2024-11-06
実験手法X-RAY DIFFRACTION (1.42 Å)
主引用文献Dynamic and Functional Profiling of Xylan-Degrading Enzymes inAspergillusSecretomes Using Activity-Based Probes.
Acs Cent.Sci., 5, 2019
8F3A
DownloadVisualize
BU of 8f3a by Molmil
HIV-1 gp41 coiled-coil pocket IQN17
分子名称: ACETIC ACID, CHLORIDE ION, IQN17
著者Bruun, T.U.J, Tang, S, Fernandez, D, Kim, P.S.
登録日2022-11-09
公開日2023-03-08
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.2 Å)
主引用文献Structure-guided stabilization improves the ability of the HIV-1 gp41 hydrophobic pocket to elicit neutralizing antibodies.
J.Biol.Chem., 299, 2023
6WK2
DownloadVisualize
BU of 6wk2 by Molmil
SETD3 mutant (N255V) in Complex with an Actin Peptide with His73 Replaced with Methionine
分子名称: 1,2-ETHANEDIOL, Actin, cytoplasmic 2, ...
著者Dai, S, Horton, J.R, Cheng, X.
登録日2020-04-15
公開日2020-06-17
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.76 Å)
主引用文献Characterization of SETD3 methyltransferase-mediated protein methionine methylation.
J.Biol.Chem., 295, 2020
6Z5J
DownloadVisualize
BU of 6z5j by Molmil
Arrangement of the matrix protein M1 in influenza A/Hong Kong/1/1968 VLPs (HA,NA,M1,M2)
分子名称: Matrix protein 1
著者Peukes, J, Xiong, X, Erlendsson, S, Qu, K, Wan, W, Kraeusslich, H.-G, Briggs, J.A.G.
登録日2020-05-26
公開日2020-10-14
最終更新日2024-05-22
実験手法ELECTRON MICROSCOPY (8 Å)
主引用文献The native structure of the assembled matrix protein 1 of influenza A virus.
Nature, 587, 2020
6WS1
DownloadVisualize
BU of 6ws1 by Molmil
Crystal structure of human phenylethanolamine N-methyltransferase (PNMT) in complex with (2S)-2-amino-4-((((2R,5R)-5-(6-amino-9H-purin-9-yl)-3,4-dihydroxytetrahydrofuran-2-yl)methyl)(3-(7,8-dichloro-1,2,3,4-tetrahydroisoquinolin-4-yl)propyl)amino)butanoic acid and AdoHcy (SAH)
分子名称: 1,2-ETHANEDIOL, 5'-([(3S)-3-amino-3-carboxypropyl]{3-[(4R)-7,8-dichloro-1,2,3,4-tetrahydroisoquinolin-4-yl]propyl}amino)-5'-deoxyadenosine, CADMIUM ION, ...
著者Harijan, R.K, Mahmoodi, N, Bonanno, J.B, Almo, S.C, Schramm, V.L.
登録日2020-04-30
公開日2020-08-05
最終更新日2024-10-23
実験手法X-RAY DIFFRACTION (2.76 Å)
主引用文献Transition-State Analogues of PhenylethanolamineN-Methyltransferase.
J.Am.Chem.Soc., 142, 2020
4X7O
DownloadVisualize
BU of 4x7o by Molmil
Co-crystal Structure of PERK bound to 1-[5-(4-amino-2,7-dimethyl-7H-pyrrolo[2,3-d]pyrimidin-5-yl)-2,3-dihydro-1H-indol-1-yl]-2-[3-fluoro-5-(trifluoromethyl)phenyl]ethanone inhibitor
分子名称: 1-[5-(4-amino-2,7-dimethyl-7H-pyrrolo[2,3-d]pyrimidin-5-yl)-2,3-dihydro-1H-indol-1-yl]-2-[3-fluoro-5-(trifluoromethyl)phenyl]ethanone, Eukaryotic translation initiation factor 2-alpha kinase 3,Eukaryotic translation initiation factor 2-alpha kinase 3
著者Shaffer, P.L, Long, A.M, Chen, H.
登録日2014-12-09
公開日2015-01-28
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.65 Å)
主引用文献Discovery of 1H-Pyrazol-3(2H)-ones as Potent and Selective Inhibitors of Protein Kinase R-like Endoplasmic Reticulum Kinase (PERK).
J.Med.Chem., 58, 2015
8K1B
DownloadVisualize
BU of 8k1b by Molmil
SID1 transmembrane family member 1
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, SID1 transmembrane family member 1
著者Guo, H, Qi, C, Lu, Y, Yang, H, Zhu, Y, Sun, F, Ji, X.
登録日2023-07-10
公開日2024-07-10
最終更新日2025-07-16
実験手法ELECTRON MICROSCOPY (3.47 Å)
主引用文献Cryo-EM structures of human SID-1 transmembrane family proteins and implications for their low-pH-dependent RNA transport activity.
Cell Res., 34, 2024
4XAQ
DownloadVisualize
BU of 4xaq by Molmil
mGluR2 ECD and mGluR3 ECD with ligands
分子名称: (1S,2S,5R,6S)-2-aminobicyclo[3.1.0]hexane-2,6-dicarboxylic acid, CHLORIDE ION, Metabotropic glutamate receptor 2, ...
著者Clawson, D.K.
登録日2014-12-15
公開日2015-02-04
最終更新日2024-10-16
実験手法X-RAY DIFFRACTION (2.21 Å)
主引用文献Synthesis and Pharmacological Characterization of C4-Disubstituted Analogs of 1S,2S,5R,6S-2-Aminobicyclo[3.1.0]hexane-2,6-dicarboxylate: Identification of a Potent, Selective Metabotropic Glutamate Receptor Agonist and Determination of Agonist-Bound Human mGlu2 and mGlu3 Amino Terminal Domain Structures.
J.Med.Chem., 58, 2015
8ZD3
DownloadVisualize
BU of 8zd3 by Molmil
Crystal structure of ALPK1-N+K in complex with CDP-heptose
分子名称: (2R,3S,4S,5S,6R)-6-[(1S)-1,2-bis(oxidanyl)ethyl]oxane-2,3,4,5-tetrol, Alpha-protein kinase 1, CYTIDINE-5'-DIPHOSPHATE, ...
著者She, Y, Ding, J.J, Shao, F.
登録日2024-05-01
公開日2025-05-07
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献crystal structure of Alpha-kinase 1 N+K in complex with CDP-hep
To be published
6WI2
DownloadVisualize
BU of 6wi2 by Molmil
Structure of human mitochondrial complex Nfs1-ISCU2-ISD11 with E.coli ACP1 at 1.95 A resolution (NIAU)2. N-terminal mutation of ISCU2 (L35) traps Nfs1 Cys loop in the active site of ISCU2 without metal present.
分子名称: 1,2-ETHANEDIOL, 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, 2-{2-[2-2-(METHOXY-ETHOXY)-ETHOXY]-ETHOXY}-ETHANOL, ...
著者Boniecki, M.T, Cygler, M.
登録日2020-04-08
公開日2020-04-22
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献The essential function of ISCU2 and its conserved N-terminus in Fe/S cluster biogenesis
To Be Published
6OI8
DownloadVisualize
BU of 6oi8 by Molmil
Crystal Structure of Haemophilus Influenzae Biotin Carboxylase Complexed with 7-((1R,5S,6s)-6-amino-3-azabicyclo[3.1.0]hexan-3-yl)-6-(2-chloro-6-(pyridin-3-yl)phenyl)pyrido[2,3-d]pyrimidin-2-amine
分子名称: 1,2-ETHANEDIOL, 7-[(1R,5S,6s)-6-amino-3-azabicyclo[3.1.0]hexan-3-yl]-6-[2-chloro-6-(pyridin-3-yl)phenyl]pyrido[2,3-d]pyrimidin-2-amine, Biotin carboxylase
著者Andrews, L.D, Kane, T.R, Dozzo, P, Haglund, C.M, Hilderbrandt, D.J, Linsell, M.S, Machajewski, T, McEnroe, G, Serio, A.W, Wlasichuk, K.B, Neau, D.B, Pakhomova, S, Waldrop, G.L, Sharp, M, Pogliano, J, Cirz, R, Cohen, F.
登録日2019-04-09
公開日2019-07-31
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Optimization and Mechanistic Characterization of Pyridopyrimidine Inhibitors of Bacterial Biotin Carboxylase.
J.Med.Chem., 62, 2019
8D0O
DownloadVisualize
BU of 8d0o by Molmil
Human alpha1,3-fucosyltransferase FUT9, heavy atom derivative
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 4-galactosyl-N-acetylglucosaminide 3-alpha-L-fucosyltransferase 9, CESIUM ION, ...
著者Kadirvelraj, R, Wood, Z.A.
登録日2022-05-26
公開日2023-05-24
最終更新日2024-10-16
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Structural basis for Lewis antigen synthesis by the alpha 1,3-fucosyltransferase FUT9.
Nat.Chem.Biol., 19, 2023
6NK0
DownloadVisualize
BU of 6nk0 by Molmil
EphA2 LBD in complex with bA-WLA-Yam peptide
分子名称: 1,2-ETHANEDIOL, 6-AMINOHEXANOIC ACID, DI(HYDROXYETHYL)ETHER, ...
著者Lechtenberg, B.C, Pasquale, E.B.
登録日2019-01-04
公開日2019-05-01
最終更新日2024-11-20
実験手法X-RAY DIFFRACTION (1.53 Å)
主引用文献Engineering nanomolar peptide ligands that differentially modulate EphA2 receptor signaling.
J.Biol.Chem., 294, 2019
7PHO
DownloadVisualize
BU of 7pho by Molmil
Crystal structure of Mycobacterium hassiacum glucosyl-3-phosphoglycerate synthase at pH 7.1 in complex with 4-hydroxybenzaldehyde
分子名称: BICARBONATE ION, D-MALATE, GLYCEROL, ...
著者Nunes-Costa, D, Silva, A, Barbosa Pereira, P.J, Macedo-Ribeiro, S.
登録日2021-08-17
公開日2023-03-01
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (1.27 Å)
主引用文献Crystal structure of Mycobacterium hassiacum glucosyl-3-phosphoglycerate synthase at pH 7.1 in complex with 4-hydroxybenzaldehyde
To Be Published
8ZEP
DownloadVisualize
BU of 8zep by Molmil
Cryo-EM structure of Adr-2-Adbp-1-dsRBD2 complex
分子名称: Adr-2-binding protein 1, Double-stranded RNA-specific adenosine deaminase adr-2, INOSITOL HEXAKISPHOSPHATE, ...
著者Liu, Z.M, Mu, J.Q, Wu, C.
登録日2024-05-06
公開日2025-05-14
最終更新日2025-07-16
実験手法ELECTRON MICROSCOPY (3.29 Å)
主引用文献Cryo-EM structure of Adr-2-Adbp-1-dsRBD2 complex
To Be Published
8ZEO
DownloadVisualize
BU of 8zeo by Molmil
Cryo-EM structure of Adr-2-Adbp-1-dsRBD1 complex
分子名称: Adr-2-binding protein 1, Double-stranded RNA-specific adenosine deaminase adr-2, INOSITOL HEXAKISPHOSPHATE, ...
著者Liu, Z.M, Mu, J.Q, Wu, C.
登録日2024-05-06
公開日2025-05-14
最終更新日2025-07-23
実験手法ELECTRON MICROSCOPY (2.79 Å)
主引用文献Cryo-EM structure of Adr-2-Adbp-1-dsRBD1 complex
To Be Published
8ZD2
DownloadVisualize
BU of 8zd2 by Molmil
NMR structure of the (CGG-dsDNA:ND=) 1:2 complex
分子名称: DNA (5'-D(*CP*AP*TP*TP*CP*GP*GP*TP*TP*AP*G)-3'), DNA (5'-D(*CP*TP*AP*AP*CP*GP*GP*AP*AP*TP*G)-3'), ~{N}-(7-methyl-1,8-naphthyridin-2-yl)-3-[[3-[(7-methyl-1,8-naphthyridin-2-yl)amino]-3-oxidanylidene-propyl]amino]propanamide
著者Sakurabayashi, S, Furuita, K, Yamada, T, Nomura, M, Nakatani, K, Kojima, C.
登録日2024-05-01
公開日2025-04-30
実験手法SOLUTION NMR
主引用文献NMR structure of the (CGG-dsDNA:ND=) 1:2 complex
To Be Published
6WIH
DownloadVisualize
BU of 6wih by Molmil
N-terminal mutation of ISCU2 (L35H36) traps Nfs1 Cys loop in the active site of ISCU2 without metal present. Structure of human mitochondrial complex Nfs1-ISCU2(L35H36)-ISD11 with E.coli ACP1 at 1.9 A resolution (NIAU)2.
分子名称: 1,2-ETHANEDIOL, 2,5,8,11,14,17-HEXAOXANONADECAN-19-OL, Acyl carrier protein, ...
著者Boniecki, M.T, Cygler, M.
登録日2020-04-09
公開日2020-05-13
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献The essential function of ISCU2 and its conserved N-terminus in Fe/S cluster biogenesis
To Be Published
4XYJ
DownloadVisualize
BU of 4xyj by Molmil
Crystal structure of human phosphofructokinase-1 in complex with ATP and Mg, Northeast Structural Genomics Consortium Target HR9275
分子名称: ADENOSINE-5'-TRIPHOSPHATE, ATP-dependent 6-phosphofructokinase, platelet type, ...
著者Forouhar, F, Webb, B.A, Szu, F.-E, Seetharaman, J, Barber, D.L, Tong, L, Northeast Structural Genomics Consortium (NESG)
登録日2015-02-02
公開日2015-05-20
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (3.1 Å)
主引用文献Structures of human phosphofructokinase-1 and atomic basis of cancer-associated mutations.
Nature, 523, 2015
8U53
DownloadVisualize
BU of 8u53 by Molmil
Mechanically activated ion channel OSCA3.1 in nanodiscs
分子名称: 1-PALMITOYL-2-LINOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE, CSC1-like protein ERD4, PALMITIC ACID, ...
著者Jojoa-Cruz, S, Lee, W.H, Ward, A.B.
登録日2023-09-12
公開日2024-06-05
実験手法ELECTRON MICROSCOPY (2.6 Å)
主引用文献Structure-guided mutagenesis of OSCAs reveals differential activation to mechanical stimuli.
Elife, 12, 2024
8R62
DownloadVisualize
BU of 8r62 by Molmil
Solution structure of Risdiplam bound to the RNA duplex formed upon 5'-splice site recognition
分子名称: 7-(4,7-diazaspiro[2.5]octan-7-yl)-2-(2,8-dimethylimidazo[1,2-b]pyridazin-6-yl)-1~{H}-pyrido[1,2-a]pyrimidin-4-one, RNA (5'-R(*AP*UP*AP*CP*(PSU)P*(PSU)P*AP*CP*CP*UP*G)-3'), RNA (5'-R(P*GP*GP*AP*GP*UP*AP*AP*GP*UP*CP*U)-3')
著者Malard, F, Campagne, S.
登録日2023-11-20
公開日2024-03-06
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献The diversity of splicing modifiers acting on A-1 bulged 5'-splice sites reveals rules for rational drug design.
Nucleic Acids Res., 52, 2024
4XML
DownloadVisualize
BU of 4xml by Molmil
Crystal structure of Fab of HIV-1 gp120 V3-specific human monoclonal antibody 2424
分子名称: Heavy chain of HIV-1 gp120 V3-specific human monoclonal antibody 2424, Light chain of HIV-1 gp120 V3-specific human monoclonal antibody 2424
著者Pan, R, Kong, X.-P.
登録日2015-01-14
公開日2015-07-08
最終更新日2024-10-09
実験手法X-RAY DIFFRACTION (2.68 Å)
主引用文献Functional and Structural Characterization of Human V3-Specific Monoclonal Antibody 2424 with Neutralizing Activity against HIV-1 JRFL.
J.Virol., 89, 2015
8FJ9
DownloadVisualize
BU of 8fj9 by Molmil
Structure of the catalytic domain of Streptococcus mutans GtfB in tetragonal space group P4322
分子名称: 1,2-ETHANEDIOL, CALCIUM ION, CHLORIDE ION, ...
著者Schormann, N, Deivanayagam, C.
登録日2022-12-19
公開日2023-05-17
最終更新日2024-05-01
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献The catalytic domains of Streptococcus mutans glucosyltransferases: a structural analysis.
Acta Crystallogr.,Sect.F, 79, 2023

243083

件を2025-10-15に公開中

PDB statisticsPDBj update infoContact PDBjnumon