Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

3VTT
DownloadVisualize
BU of 3vtt by Molmil
High Resolution crystal structure of Dengue 3 Envelope protein domain III (ED3)
分子名称: Envelope protein E, SULFATE ION
著者Elahi, M, Islam, M.M, Kuroda, Y.
登録日2012-06-07
公開日2012-12-26
最終更新日2013-08-07
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献High resolution crystal structure of dengue-3 envelope protein domain III suggests possible molecular mechanisms for serospecific antibody recognition
Proteins, 81, 2013
1K79
DownloadVisualize
BU of 1k79 by Molmil
Ets-1(331-440)+GGAA duplex
分子名称: C-ets-1 protein, DNA (5'-D(*CP*AP*CP*AP*TP*TP*TP*CP*CP*GP*GP*CP*AP*CP*T)-3'), DNA (5'-D(*TP*AP*GP*TP*GP*CP*CP*GP*GP*AP*AP*AP*TP*GP*T)-3')
著者Garvie, C.W, Hagman, J, Wolberger, C.
登録日2001-10-18
公開日2002-01-04
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Structural studies of Ets-1/Pax5 complex formation on DNA.
Mol.Cell, 8, 2001
2IZO
DownloadVisualize
BU of 2izo by Molmil
Structure of an Archaeal PCNA1-PCNA2-FEN1 Complex
分子名称: DNA POLYMERASE SLIDING CLAMP B, DNA POLYMERASE SLIDING CLAMP C, FLAP STRUCTURE-SPECIFIC ENDONUCLEASE, ...
著者Dore, A.S, Kilkenny, M.L, Roe, S.M, Pearl, L.H.
登録日2006-07-25
公開日2006-09-06
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Structure of an Archaeal PCNA1-PCNA2-Fen1 Complex: Elucidating PCNA Subunit and Client Enzyme Specificity.
Nucleic Acids Res., 34, 2006
2HWM
DownloadVisualize
BU of 2hwm by Molmil
Crystal structure of Lys12Val/Cys117Val mutant of human acidic fibroblast growth factor at 1.60 angstrom resolution
分子名称: FORMIC ACID, Heparin-binding growth factor 1
著者Dubey, V.K, Lee, J, Somasundaram, T, Blaber, M.
登録日2006-08-01
公開日2007-06-12
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Spackling the crack: stabilizing human fibroblast growth factor-1 by targeting the N and C terminus beta-strand interactions.
J.Mol.Biol., 371, 2007
2B90
DownloadVisualize
BU of 2b90 by Molmil
Crystal structure of the interleukin-4 variant T13DR85A
分子名称: Interleukin-4, SULFATE ION
著者Kraich, M, Klein, M, Patino, E, Harrer, H, Sebald, W, Mueller, T.D.
登録日2005-10-10
公開日2006-05-30
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献A modular interface of IL-4 allows for scalable affinity without affecting specificity for the IL-4 receptor
Bmc Biol., 4, 2006
2B8U
DownloadVisualize
BU of 2b8u by Molmil
Crystal structure of wildtype human Interleukin-4
分子名称: Interleukin-4, SULFATE ION
著者Kraich, M, Klein, M, Patino, E, Harrer, H, Sebald, W, Mueller, T.D.
登録日2005-10-10
公開日2006-05-30
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献A modular interface of IL-4 allows for scalable affinity without affecting specificity for the IL-4 receptor
Bmc Biol., 4, 2006
2B8Y
DownloadVisualize
BU of 2b8y by Molmil
Crystal structure of the interleukin-4 variant T13DF82D
分子名称: Interleukin-4, SULFATE ION
著者Kraich, M, Klein, M, Patino, E, Harrer, H, Sebald, W, Mueller, T.D.
登録日2005-10-10
公開日2006-05-30
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献A modular interface of IL-4 allows for scalable affinity without affecting specificity for the IL-4 receptor
Bmc Biol., 4, 2006
2OQQ
DownloadVisualize
BU of 2oqq by Molmil
Crystal structure of HY5 leucine zipper homodimer from Arabidopsis thaliana
分子名称: Transcription factor HY5
著者Yoon, M.-K, Kim, H.M, Choi, G, Lee, J.-O, Choi, B.-S.
登録日2007-02-01
公開日2007-03-20
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structural basis for the conformational integrity of the Arabidopsis thaliana HY5 leucine zipper homodimer.
J.Biol.Chem., 282, 2007
6QHL
DownloadVisualize
BU of 6qhl by Molmil
14-3-3 sigma with RelA/p65 binding site pS45
分子名称: 14-3-3 protein sigma, GLYCEROL, Transcription factor p65
著者Wolter, M, Ottmann, C.
登録日2019-01-16
公開日2020-05-13
最終更新日2020-12-30
実験手法X-RAY DIFFRACTION (1.2 Å)
主引用文献Selectivity via Cooperativity: Preferential Stabilization of the p65/14-3-3 Interaction with Semisynthetic Natural Products.
J.Am.Chem.Soc., 142, 2020
7Y5T
DownloadVisualize
BU of 7y5t by Molmil
CryoEM structure of PS1-containing gamma-secretase in complex with MRK-560
分子名称: 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Guo, X, Wang, Y, Zhou, J, Jin, C, Wang, J, Jia, B, Jing, D, Yan, C, Lei, J, Zhou, R, Shi, Y.
登録日2022-06-17
公開日2022-11-02
実験手法ELECTRON MICROSCOPY (2.9 Å)
主引用文献Molecular basis for isoform-selective inhibition of presenilin-1 by MRK-560.
Nat Commun, 13, 2022
7UUQ
DownloadVisualize
BU of 7uuq by Molmil
Cryo-EM of self-assembling pyrene IDP
分子名称: Pyrene-containing peptide fibril
著者Wang, F, Guo, J, Xu, B, Egelman, E.H.
登録日2022-04-28
公開日2023-05-10
最終更新日2023-12-27
実験手法ELECTRON MICROSCOPY (3.1 Å)
主引用文献Hierarchical Assembly of Intrinsically Disordered Short Peptides.
Chem, 9, 2023
3P79
DownloadVisualize
BU of 3p79 by Molmil
P38 inhibitor-bound
分子名称: 1-{3-tert-butyl-1-[2-(1,1-dioxidothiomorpholin-4-yl)-2-oxoethyl]-1H-pyrazol-5-yl}-3-naphthalen-2-ylurea, Mitogen-activated protein kinase 14, octyl beta-D-glucopyranoside
著者Moffett, K.K, Namboodiri, H.
登録日2010-10-12
公開日2011-10-12
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Discovery of a novel class of non-ATP site DFG-out state p38 inhibitors utilizing computationally assisted virtual fragment-based drug design (vFBDD).
Bioorg.Med.Chem.Lett., 21, 2011
3P4K
DownloadVisualize
BU of 3p4k by Molmil
The third conformation of p38a MAP kinase observed in phosphorylated p38a and in solution
分子名称: MAP kinase 14, Mitogen-activated protein kinase 14
著者Akella, R, Min, X, Wu, Q, Gardner, K.H, Goldsmith, E.J.
登録日2010-10-06
公開日2011-01-05
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2.304 Å)
主引用文献The third conformation of p38a MAP kinase observed in phosphorylated p38a and in solution
Structure, 18, 2010
3P78
DownloadVisualize
BU of 3p78 by Molmil
P38 inhibitor-bound
分子名称: 1-{5-tert-butyl-3-[(1,1-dioxidothiomorpholin-4-yl)carbonyl]thiophen-2-yl}-3-naphthalen-2-ylurea, Mitogen-activated protein kinase 14, octyl beta-D-glucopyranoside
著者Moffett, K.K, Namboodiri, H.
登録日2010-10-12
公開日2011-10-12
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Discovery of a novel class of non-ATP site DFG-out state p38 inhibitors utilizing computationally assisted virtual fragment-based drug design (vFBDD).
Bioorg.Med.Chem.Lett., 21, 2011
3P7C
DownloadVisualize
BU of 3p7c by Molmil
p38 inhibitor-bound
分子名称: 1-[5-tert-butyl-3-({4-[2-(dimethylamino)ethyl]-5-oxo-1,4-diazepan-1-yl}carbonyl)thiophen-2-yl]-3-(2,3-dichlorophenyl)urea, Mitogen-activated protein kinase 14, octyl beta-D-glucopyranoside
著者Moffett, K.K, Namboodiri, H.
登録日2010-10-12
公開日2011-10-12
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Discovery of a novel class of non-ATP site DFG-out state p38 inhibitors utilizing computationally assisted virtual fragment-based drug design (vFBDD).
Bioorg.Med.Chem.Lett., 21, 2011
3P49
DownloadVisualize
BU of 3p49 by Molmil
Crystal Structure of a Glycine Riboswitch from Fusobacterium nucleatum
分子名称: GLYCINE, GLYCINE RIBOSWITCH, MAGNESIUM ION, ...
著者Butler, E.B, Wang, J, Xiong, Y, Strobel, S.
登録日2010-10-06
公開日2011-04-06
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (3.55 Å)
主引用文献Structural basis of cooperative ligand binding by the glycine riboswitch.
Chem.Biol., 18, 2011
6R5L
DownloadVisualize
BU of 6r5l by Molmil
Fragment AZ-006 binding at the p53pT387/14-3-3 sigma interface
分子名称: 14-3-3 protein sigma, 4-[[(2~{S})-1-azanylpropan-2-yl]amino]-6-(sulfanylmethyl)-1-benzothiophene-2-carboximidamide, CHLORIDE ION, ...
著者Genet, S, Wolter, M, Guillory, X, Somsen, B, Leysen, S, Castaldi, P, Ottmann, C.
登録日2019-03-25
公開日2020-06-17
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.884 Å)
主引用文献Fragment-based Differential Targeting of PPI Stabilizer Interfaces.
J.Med.Chem., 63, 2020
6O60
DownloadVisualize
BU of 6o60 by Molmil
Crystal structure of GGTase3-FBXL2-SKP1 complex
分子名称: F-box/LRR-repeat protein 2, Geranylgeranyl transferase type-2 subunit beta, Protein prenyltransferase alpha subunit repeat-containing protein 1, ...
著者Wang, H, Zheng, N.
登録日2019-03-04
公開日2019-06-26
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.503 Å)
主引用文献GGTase3 is a newly identified geranylgeranyltransferase targeting a ubiquitin ligase.
Nat.Struct.Mol.Biol., 26, 2019
6RK8
DownloadVisualize
BU of 6rk8 by Molmil
Fragment AZ-014 binding at the p53pT387/14-3-3 sigma interface
分子名称: 14-3-3 protein sigma, 7-(3-azanyl-4-methyl-pyrazol-1-yl)-1-benzothiophene-2-carboximidamide, CHLORIDE ION, ...
著者Genet, S, Wolter, M, Guillory, X, Somsen, B, Leysen, S, Patel, J, Castaldi, P, Ottmann, C.
登録日2019-04-30
公開日2020-06-17
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.602 Å)
主引用文献Fragment-based Differential Targeting of PPI Stabilizer Interfaces.
J.Med.Chem., 63, 2020
6RL3
DownloadVisualize
BU of 6rl3 by Molmil
Fragment AZ-003 binding at the p53pT387/14-3-3 sigma interface
分子名称: 14-3-3 protein sigma, 5-azanyl-4-phenyl-thiophene-2-carboximidamide, CHLORIDE ION, ...
著者Genet, S, Wolter, M, Guillory, X, Somsen, B, Leysen, S, Patel, J, Castaldi, P, Ottmann, C.
登録日2019-05-01
公開日2020-06-17
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.3 Å)
主引用文献Fragment-based Differential Targeting of PPI Stabilizer Interfaces.
J.Med.Chem., 63, 2020
6RL6
DownloadVisualize
BU of 6rl6 by Molmil
Fragment AZ-024 binding at the p53pT387/14-3-3 sigma interface
分子名称: 14-3-3 protein sigma, CHLORIDE ION, Cellular tumor antigen p53, ...
著者Genet, S, Wolter, M, Guillory, X, Somsen, B, Leysen, S, Patel, J, Castaldi, P, Ottmann, C.
登録日2019-05-01
公開日2020-06-17
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Fragment-based Differential Targeting of PPI Stabilizer Interfaces.
J.Med.Chem., 63, 2020
6RLZ
DownloadVisualize
BU of 6rlz by Molmil
Crystal Structure of 14-3-3zeta in complex with a macrocyclic 8-mer peptide derived from ExoS
分子名称: 14-3-3 protein zeta/delta, EtMe
著者Wallraven, K, Grossmann, T.N, Hennig, S.
登録日2019-05-03
公開日2020-03-18
最終更新日2020-03-25
実験手法X-RAY DIFFRACTION (3.7 Å)
主引用文献Adapting free energy perturbation simulations for large macrocyclic ligands: how to dissect contributions from direct binding and free ligand flexibility.
Chem Sci, 11, 2020
7NI4
DownloadVisualize
BU of 7ni4 by Molmil
Human ATM kinase domain with bound M4076 inhibitor
分子名称: 8-(1,3-dimethylpyrazol-4-yl)-1-(3-fluoranyl-5-methoxy-pyridin-4-yl)-7-methoxy-3-methyl-imidazo[4,5-c]quinolin-2-one, Serine-protein kinase ATM, ZINC ION
著者Stakyte, K, Rotheneder, M.
登録日2021-02-11
公開日2021-09-01
最終更新日2024-07-10
実験手法ELECTRON MICROSCOPY (3 Å)
主引用文献Molecular basis of human ATM kinase inhibition.
Nat.Struct.Mol.Biol., 28, 2021
7NI5
DownloadVisualize
BU of 7ni5 by Molmil
Human ATM kinase with bound inhibitor KU-55933
分子名称: 2-morpholin-4-yl-6-thianthren-1-yl-pyran-4-one, Serine-protein kinase ATM, ZINC ION
著者Bartho, J.D, Stakyte, K, Rotheneder, M, Lammens, K, Hopfner, K.P.
登録日2021-02-11
公開日2021-09-01
最終更新日2024-07-10
実験手法ELECTRON MICROSCOPY (2.78 Å)
主引用文献Molecular basis of human ATM kinase inhibition.
Nat.Struct.Mol.Biol., 28, 2021
7NI6
DownloadVisualize
BU of 7ni6 by Molmil
Human ATM kinase with bound ATPyS
分子名称: MAGNESIUM ION, PHOSPHOTHIOPHOSPHORIC ACID-ADENYLATE ESTER, Serine-protein kinase ATM, ...
著者Stakyte, K, Rotheneder, M, Lammens, K, Bartho, J.D.
登録日2021-02-11
公開日2021-09-01
最終更新日2024-07-10
実験手法ELECTRON MICROSCOPY (2.8 Å)
主引用文献Molecular basis of human ATM kinase inhibition.
Nat.Struct.Mol.Biol., 28, 2021

223166

件を2024-07-31に公開中

PDB statisticsPDBj update infoContact PDBjnumon