PDB: 42250 件ウェブページステータス検索Chemie searchBIRD

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8GN0	Crystal structure of DCBQ-bound photosystem II complex 分子名称: (3R)-beta,beta-caroten-3-ol, 1,2-DI-O-ACYL-3-O-[6-DEOXY-6-SULFO-ALPHA-D-GLUCOPYRANOSYL]-SN-GLYCEROL, 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE, ... 著者 Kamada, S, Nakajima, Y, Shen, J.-R. 登録日 2022-08-22 公開日 2023-07-05 最終更新日 2023-11-29 実験手法 X-RAY DIFFRACTION (2.15 Å) 主引用文献 Structural insights into the action mechanisms of artificial electron acceptors in photosystem II. J.Biol.Chem., 299, 2023
8GN2	Crystal structure of PPBQ-bound photosystem II complex 分子名称: (3R)-beta,beta-caroten-3-ol, 1,2-DI-O-ACYL-3-O-[6-DEOXY-6-SULFO-ALPHA-D-GLUCOPYRANOSYL]-SN-GLYCEROL, 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE, ... 著者 Kamada, S, Nakajima, Y, Shen, J.-R. 登録日 2022-08-22 公開日 2023-07-05 最終更新日 2023-11-29 実験手法 X-RAY DIFFRACTION (1.95 Å) 主引用文献 Structural insights into the action mechanisms of artificial electron acceptors in photosystem II. J.Biol.Chem., 299, 2023
7K00	Structure of the Bacterial Ribosome at 2 Angstrom Resolution 分子名称: 16S rRNA, 23S rRNA, 30S ribosomal protein S10, ... 著者 Watson, Z.L, Ward, F.R, Meheust, R, Ad, O, Schepartz, A, Banfield, J.F, Cate, J.H.D. 登録日 2020-09-02 公開日 2020-09-23 最終更新日 2025-03-19 実験手法 ELECTRON MICROSCOPY (1.98 Å) 主引用文献 Structure of the bacterial ribosome at 2 angstrom resolution. Elife, 9, 2020
6GLV	Crystal structure of hMTH1 D120N in complex with TH scaffold 1 in the absence of acetate 分子名称: 4-phenylpyrimidin-2-amine, 7,8-dihydro-8-oxoguanine triphosphatase, SULFATE ION 著者 Eberle, S.A, Wiedmer, L, Sledz, P, Caflisch, A. 登録日 2018-05-23 公開日 2019-02-20 最終更新日 2024-01-17 実験手法 X-RAY DIFFRACTION (1.601 Å) 主引用文献 hMTH1 D120N in complex with TH scaffold 1 To Be Published
3MOH	The structure of rat cytosolic PEPCK mutant A467G in complex with phosphoglycolate and GDP 分子名称: 1,2-ETHANEDIOL, 2-PHOSPHOGLYCOLIC ACID, GUANOSINE-5'-DIPHOSPHATE, ... 著者 Johnson, T.A, Holyoak, T. 登録日 2010-04-22 公開日 2010-06-02 最終更新日 2024-02-21 実験手法 X-RAY DIFFRACTION (2.1 Å) 主引用文献 Increasing the conformational entropy of the Omega-loop lid domain in phosphoenolpyruvate carboxykinase impairs catalysis and decreases catalytic fidelity . Biochemistry, 49, 2010
7JQM	Crystal structure of the Thermus thermophilus 70S ribosome in complex with Bac7-002, mRNA, and deacylated P-site tRNA at 3.05A resolution 分子名称: 16S Ribosomal RNA, 23S Ribosomal RNA, 30S ribosomal protein S10, ... 著者 Mardirossian, M, Sola, R, Beckert, B, Valencic, E, Collis, D.W.P, Borisek, J, Armas, F, Di Stasi, A, Buchmann, J, Syroegin, E.A, Polikanov, Y.S, Magistrato, A, Hilpert, K, Wilson, D.N, Scocchi, M. 登録日 2020-08-11 公開日 2020-08-26 最終更新日 2025-03-19 実験手法 X-RAY DIFFRACTION (3.05 Å) 主引用文献 Peptide Inhibitors of Bacterial Protein Synthesis with Broad Spectrum and SbmA-Independent Bactericidal Activity against Clinical Pathogens. J.Med.Chem., 63, 2020
6H6H	Crystal structures of the murine class I major histocompatibility complex H-2Dbm13 in complex with adenovirus-derived peptide Ad10 分子名称: Beta-2-microglobulin, GLYCEROL, H-2D cell surface glycoprotein, ... 著者 Achour, A, Sandalova, T, Han, X. 登録日 2018-07-27 公開日 2019-08-14 最終更新日 2024-11-13 実験手法 X-RAY DIFFRACTION (2.4 Å) 主引用文献 Crystal structures of H-2Db and H-2Dbm13 with cancer-associated Ad 10 peptide reveal that subtle changes in the peptide environment impact thermostability and alloreactivity to be published
7ZNJ	Structure of an ALYREF-exon junction complex hexamer 分子名称: Eukaryotic initiation factor 4A-III, N-terminally processed, MAGNESIUM ION, ... 著者 Pacheco-Fiallos, F.B, Vorlaender, M.K, Plaschka, C. 登録日 2022-04-21 公開日 2023-04-12 最終更新日 2025-07-09 実験手法 ELECTRON MICROSCOPY (2.4 Å) 主引用文献 mRNA recognition and packaging by the human transcription-export complex. Nature, 616, 2023
3MOE	The structure of rat cytosolic PEPCK mutant A467G in complex with Beta-Sulfopyruvate and GTP 分子名称: 1,2-ETHANEDIOL, GUANOSINE-5'-TRIPHOSPHATE, MANGANESE (II) ION, ... 著者 Johnson, T.A, Holyoak, T. 登録日 2010-04-22 公開日 2010-06-02 最終更新日 2024-02-21 実験手法 X-RAY DIFFRACTION (1.25 Å) 主引用文献 Increasing the conformational entropy of the Omega-loop lid domain in phosphoenolpyruvate carboxykinase impairs catalysis and decreases catalytic fidelity . Biochemistry, 49, 2010
7U21	Human Class I MHC HLA-A2 in complex with AVGSYVYSV peptide 分子名称: Beta-2-microglobulin, MHC class I antigen, A-2 alpha chain, ... 著者 Weiss, L.I, Baker, B.M. 登録日 2022-02-22 公開日 2022-06-01 最終更新日 2024-10-23 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 Physicochemical Heuristics for Identifying High Fidelity, Near-Native Structural Models of Peptide/MHC Complexes. Front Immunol, 13, 2022
1K27	Crystal Structure of 5'-Deoxy-5'-Methylthioadenosine Phosphorylase in Complex with a Transition State Analogue 分子名称: (3S,4R)-2-(4-AMINO-5H-PYRROLO[3,2-D]PYRIMIDIN-7-YL)-5-[(METHYLSULFANYL)METHYL]PYRROLIDINE-3,4-DIOL, 5'-Deoxy-5'-Methylthioadenosine Phosphorylase, PHOSPHATE ION 著者 Shi, W, Singh, V, Tyler, P.C, Furneaux, R.H, Almo, S.C, Schramm, V.L. 登録日 2001-09-26 公開日 2003-09-30 最終更新日 2023-08-16 実験手法 X-RAY DIFFRACTION (1.95 Å) 主引用文献 Picomolar transition state analogue inhibitors of human 5'-methylthioadenosine phosphorylase and X-ray structure with MT-immucillin-A Biochemistry, 43, 2004
4BTS	THE CRYSTAL STRUCTURE OF THE EUKARYOTIC 40S RIBOSOMAL SUBUNIT IN COMPLEX WITH EIF1 AND EIF1A 分子名称: 18S ribosomal RNA, 40S RIBOSOMAL PROTEIN RACK1, 40S RIBOSOMAL PROTEIN RPS10E, ... 著者 Weisser, M, Voigts-Hoffmann, F, Rabl, J, Leibundgut, M, Ban, N. 登録日 2013-06-19 公開日 2013-07-17 最終更新日 2023-12-20 実験手法 X-RAY DIFFRACTION (3.703 Å) 主引用文献 The crystal structure of the eukaryotic 40S ribosomal subunit in complex with eIF1 and eIF1A. Nat. Struct. Mol. Biol., 20, 2013
6KM7	The structural basis for the internal interaction in RBBP5 分子名称: HEXAETHYLENE GLYCOL, NONAETHYLENE GLYCOL, Retinoblastoma-binding protein 5, ... 著者 Han, J, Li, T, Chen, Y. 登録日 2019-07-31 公開日 2019-10-02 最終更新日 2024-03-27 実験手法 X-RAY DIFFRACTION (1.801 Å) 主引用文献 The internal interaction in RBBP5 regulates assembly and activity of MLL1 methyltransferase complex. Nucleic Acids Res., 47, 2019
3CHN	Solution structure of human secretory IgA1 分子名称: Ig alpha-1 chain C region, Immunoglobulin kappa light chain, Secretory component 著者 Bonner, A, Almogren, A, Furtado, P.B, Kerr, M.A, Perkins, S.J. 登録日 2008-03-10 公開日 2008-12-30 最終更新日 2024-02-21 実験手法 SOLUTION SCATTERING 主引用文献 Location of secretory component on the Fc edge of dimeric IgA1 reveals insight into the role of secretory IgA1 in mucosal immunity. Mucosal Immunol, 2, 2009
5DDH	Structure of HLA-A2:01 with the 12-mer peptide F12K 分子名称: 12-mer peptide F12K, Beta-2-microglobulin, GLYCEROL, ... 著者 Remesh, S.G, Zajonc, D. 登録日 2015-08-24 公開日 2016-07-27 最終更新日 2024-11-06 実験手法 X-RAY DIFFRACTION (1.5 Å) 主引用文献 Toxoplasma gondii peptide ligands open the gate of the HLA class I binding groove. Elife, 5, 2016
5DEG	Crystal structure of B*27:06 bound to the pVIPR peptide 分子名称: Beta-2-microglobulin, GLYCEROL, MHC class I antigen, ... 著者 Loll, B, Fabian, H, Hee, C.S, Huser, H, Uchanska-Ziegler, B, Ziegler, A. 登録日 2015-08-25 公開日 2015-11-18 最終更新日 2024-10-23 実験手法 X-RAY DIFFRACTION (1.83 Å) 主引用文献 Increased Conformational Flexibility of HLA-B*27 Subtypes Associated With Ankylosing Spondylitis. Arthritis Rheumatol, 68, 2016
3CZA	Crystal Structure of E18D DJ-1 分子名称: MALONIC ACID, Protein DJ-1 著者 Witt, A.C, Lakshminarasimhan, M, Remington, B.C, Hashim, S, Pozharski, E, Wilson, M.A. 登録日 2008-04-28 公開日 2008-07-01 最終更新日 2023-08-30 実験手法 X-RAY DIFFRACTION (1.2 Å) 主引用文献 Cysteine pKa depression by a protonated glutamic acid in human DJ-1. Biochemistry, 47, 2008
3D2R	Crystal structure of pyruvate dehydrogenase kinase isoform 4 in complex with ADP 分子名称: ADENOSINE-5'-DIPHOSPHATE, GLYCEROL, MAGNESIUM ION, ... 著者 Kato, M, Wynn, R.M, Chuang, L.C, Tso, S.-C, Li, J, Chuang, D.T. 登録日 2008-05-08 公開日 2008-08-05 最終更新日 2023-08-30 実験手法 X-RAY DIFFRACTION (2.03 Å) 主引用文献 Pyruvate Dehydrogenase Kinase-4 Structures Reveal a Metastable Open Conformation Fostering Robust Core-free Basal Activity. J.Biol.Chem., 283, 2008
5DJ4	Leucine-bound Sestrin2 from Homo sapiens 分子名称: LEUCINE, Sestrin-2 著者 Saxton, R.A, Knockenhauer, K.E, Schwartz, T.U. 登録日 2015-09-01 公開日 2015-11-25 最終更新日 2024-03-06 実験手法 X-RAY DIFFRACTION (2.697 Å) 主引用文献 Structural basis for leucine sensing by the Sestrin2-mTORC1 pathway. Science, 351, 2016
5DQV	The crystal structure of Bacillus subtilis YpgQ 分子名称: NICKEL (II) ION, Uncharacterized protein 著者 Jeon, Y.J, Song, W.S, Yoon, S.I. 登録日 2015-09-15 公開日 2016-04-27 最終更新日 2024-03-20 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Structural and biochemical characterization of bacterial YpgQ protein reveals a metal-dependent nucleotide pyrophosphohydrolase J.Struct.Biol., 195, 2016
3CHD	Crystal structure of Aspergillus fumigatus chitinase B1 in complex with dipeptide 分子名称: (2S)-2-[[(2S)-2-acetamido-5-[[N-(methylcarbamoyl)carbamimidoyl]amino]pentanoyl]-methyl-amino]-3-phenyl-propanoic acid, Chitinase, SULFATE ION 著者 Andersen, O.A, van Aalten, D.M.F. 登録日 2008-03-09 公開日 2008-03-25 最終更新日 2023-08-30 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Structure-based dissection of the natural product cyclopentapeptide chitinase inhibitor argifin. Chem.Biol., 15, 2008
3CJZ	Effects of N2,N2-dimethylguanosine on RNA structure and stability: crystal structure of an RNA duplex with tandem m22G:A pairs 分子名称: RNA (5'-R(*GP*GP*AP*CP*GP*(M2G)P*AP*CP*GP*UP*CP*CP*U)-3') 著者 Pallan, P.S, Kreutz, C, Bosio, S, Micura, R, Egli, M. 登録日 2008-03-14 公開日 2008-10-14 最終更新日 2024-04-03 実験手法 X-RAY DIFFRACTION (1.8 Å) 主引用文献 Effects of N2,N2-dimethylguanosine on RNA structure and stability: crystal structure of an RNA duplex with tandem m2 2G:A pairs. Rna, 14, 2008
3CLD	Ligand binding domain of the glucocorticoid receptor complexed with fluticazone furoate 分子名称: (6alpha,11alpha,14beta,16alpha,17alpha)-6,9-difluoro-17-{[(fluoromethyl)sulfanyl]carbonyl}-11-hydroxy-16-methyl-3-oxoan drosta-1,4-dien-17-yl furan-2-carboxylate, Glucocorticoid receptor, Tif2 coactivator motif 著者 Shewchuk, L.M, McLay, I, Stewart, E, Biggadike, K.B, Hassell, A.M, Bledsoe, R.K. 登録日 2008-03-18 公開日 2008-06-24 最終更新日 2023-08-30 実験手法 X-RAY DIFFRACTION (2.84 Å) 主引用文献 X-ray crystal structure of the novel enhanced-affinity glucocorticoid agonist fluticasone furoate in the glucocorticoid receptor-ligand binding domain. J.Med.Chem., 51, 2008
4Q1C	Human dCK C4S-S74E mutant in complex with UDP and the inhibitor 8 {2,2'-[{4-[(2R)-4-{[(4,6-diaminopyrimidin-2-yl)sulfanyl]methyl}-5-propyl-2,3-dihydro-1,3-thiazol-2-yl]benzene-1,2-diyl}bis(oxy)]diethanol} 分子名称: 2,2'-((4-(4-(((4,6-diaminopyrimidin-2-yl)thio)methyl)-5-propylthiazol-2-yl)-1,2-phenylene)bis(oxy))bis(ethan-1-ol), Deoxycytidine kinase, URIDINE-5'-DIPHOSPHATE 著者 Nomme, J, Lavie, A. 登録日 2014-04-03 公開日 2014-11-05 最終更新日 2023-09-20 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Structure-guided development of deoxycytidine kinase inhibitors with nanomolar affinity and improved metabolic stability. J.Med.Chem., 57, 2014
3CQZ	Crystal structure of 10 subunit RNA polymerase II in complex with the inhibitor alpha-amanitin 分子名称: ALPHA-AMANITIN, DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB1, DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB11, ... 著者 Kaplan, C.D, Larsson, K.-M, Kornberg, R.D. 登録日 2008-04-03 公開日 2008-07-22 最終更新日 2023-08-30 実験手法 X-RAY DIFFRACTION (2.8 Å) 主引用文献 The RNA Polymerase II Trigger Loop Functions in Substrate Selection and is Directly Targeted by Alpha-Amanitin. Mol.Cell, 30, 2008

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