PDB: 225399 件ウェブページステータス検索Chemie searchBIRD

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1VFH	Crystal structure of alanine racemase from D-cycloserine producing Streptomyces lavendulae 分子名称: PYRIDOXAL-5'-PHOSPHATE, alanine racemase 著者 Noda, M, Matoba, Y, Kumagai, T, Sugiyama, M. 登録日 2004-04-13 公開日 2004-09-14 最終更新日 2023-11-15 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Structural evidence that alanine racemase from a D-cycloserine-producing microorganism exhibits resistance to its own product. J.Biol.Chem., 279, 2004
3SE9	Crystal structure of broadly and potently neutralizing antibody VRC-PG04 in complex with HIV-1 gp120 分子名称: (R,R)-2,3-BUTANEDIOL, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, ... 著者 Kwong, P.D, Zhou, T. 登録日 2011-06-10 公開日 2011-08-10 最終更新日 2021-04-07 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Focused evolution of HIV-1 neutralizing antibodies revealed by structures and deep sequencing. Science, 333, 2011
2X52	CRYSTAL STRUCTURE OF WHEAT GERM AGGLUTININ ISOLECTIN 3 IN COMPLEX WITH A SYNTHETIC DIVALENT CARBOHYDRATE LIGAND 分子名称: AGGLUTININ ISOLECTIN 3, BIS-(2-ACETAMIDO-2-DEOXY-ALPHA-D-GLUCOPYRANOSYLOXYCARBONYL)-4,7,10-TRIOXA-1,13-TRIDECANEDIAMINE, GLYCEROL 著者 Schwefel, D, Maierhofer, C, Wittmann, V, Diederichs, K, Welte, W. 登録日 2010-02-05 公開日 2010-02-23 最終更新日 2023-12-20 実験手法 X-RAY DIFFRACTION (1.7 Å) 主引用文献 Structural Basis of Multivalent Binding to Wheat Germ Agglutinin. J.Am.Chem.Soc., 132, 2010
2A41	Ternary complex of the WH2 Domain of WIP with Actin-DNAse I 分子名称: ADENOSINE-5'-TRIPHOSPHATE, Actin, alpha skeletal muscle, ... 著者 Chereau, D, Kerff, F, Dominguez, R. 登録日 2005-06-27 公開日 2005-11-01 最終更新日 2023-08-23 実験手法 X-RAY DIFFRACTION (2.6 Å) 主引用文献 Actin-bound structures of Wiskott-Aldrich syndrome protein (WASP)-homology domain 2 and the implications for filament assembly Proc.Natl.Acad.Sci.Usa, 102, 2005
2NXZ	HIV-1 gp120 Envelope Glycoprotein (T257S, S334A, S375W) Complexed with CD4 and Antibody 17b 分子名称: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, ANTIBODY 17B, ... 著者 Zhou, T, Xu, L, Dey, B, Hessell, A.J, Van Ryk, D, Xiang, S.H, Yang, X, Zhang, M.Y, Zwick, M.B, Arthos, J, Burton, D.R, Dimitrov, D.S, Sodroski, J, Wyatt, R, Nabel, G.J, Kwong, P.D. 登録日 2006-11-20 公開日 2007-02-06 最終更新日 2023-08-30 実験手法 X-RAY DIFFRACTION (2.04 Å) 主引用文献 Structural definition of a conserved neutralization epitope on HIV-1 gp120. Nature, 445, 2007
1GX1	Structure of 2C-Methyl-D-erythritol-2,4-cyclodiphosphate Synthase 分子名称: 2-C-METHYL-D-ERYTHRITOL 2,4-CYCLODIPHOSPHATE SYNTHASE, CYTIDINE-5'-DIPHOSPHATE, MANGANESE (II) ION, ... 著者 Kemp, L.E, Bond, C.S, Hunter, W.N. 登録日 2002-03-26 公開日 2002-04-03 最終更新日 2018-02-28 実験手法 X-RAY DIFFRACTION (1.8 Å) 主引用文献 Structure of 2C-Methyl-D-Erythritol 2,4-Cyclodiphosphate Synthase: An Essential Enzyme for Isoprenoid Biosynthesis and Target for Antimicrobial Drug Development Proc.Natl.Acad.Sci.USA, 99, 2002
2NY5	HIV-1 gp120 Envelope Glycoprotein (M95W, W96C, I109C, T257S, V275C, S334A, S375W, Q428C, A433M) Complexed with CD4 and Antibody 17b 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, ANTIBODY 17B, HEAVY CHAIN, ... 著者 Zhou, T, Xu, L, Dey, B, Hessell, A.J, Van Ryk, D, Xiang, S.H, Yang, X, Zhang, M.Y, Zwick, M.B, Arthos, J, Burton, D.R, Dimitrov, D.S, Sodroski, J, Wyatt, R, Nabel, G.J, Kwong, P.D. 登録日 2006-11-20 公開日 2007-02-06 最終更新日 2023-08-30 実験手法 X-RAY DIFFRACTION (2.5 Å) 主引用文献 Structural definition of a conserved neutralization epitope on HIV-1 gp120. Nature, 445, 2007
3SO3	Structures of Fab-Protease Complexes Reveal a Highly Specific Non-Canonical Mechanism of Inhibition. 分子名称: A11 FAB heavy chain, A11 FAB light chain, GLYCEROL, ... 著者 Schneider, E.L, Farady, C.J, Egea, P.F, Goetz, D.H, Baharuddin, A, Craik, C.S. 登録日 2011-06-29 公開日 2012-06-20 最終更新日 2023-09-13 実験手法 X-RAY DIFFRACTION (2.1 Å) 主引用文献 A reverse binding motif that contributes to specific protease inhibition by antibodies. J.Mol.Biol., 415, 2012
5UR1	FGFR1 kinase domain complex with SN37333 in reversible binding mode 分子名称: 3-(2,6-dichloro-3,5-dimethoxyphenyl)-1-{1-[4-(dimethylamino)but-2-enoyl]piperidin-4-yl}-7-(phenylamino)-3,4-dihydropyrimido[4,5-d]pyrimidin-2(1H)-one, Fibroblast growth factor receptor 1 著者 Yosaatmadja, Y, Paik, W.-K, Smaill, J.B, Squire, C.J. 登録日 2017-02-09 公開日 2017-05-31 最終更新日 2023-10-04 実験手法 X-RAY DIFFRACTION (2.2 Å) 主引用文献 2-Oxo-3, 4-dihydropyrimido[4, 5-d]pyrimidinyl derivatives as new irreversible pan fibroblast growth factor receptor (FGFR) inhibitors. Eur J Med Chem, 135, 2017
1L6G	Alanine racemase bound with N-(5'-phosphopyridoxyl)-D-alanine 分子名称: N-(5'-PHOSPHOPYRIDOXYL)-D-ALANINE, alanine racemase 著者 Watanabe, A, Yoshimura, T, Mikami, B, Hayashi, H, Kagamiyama, H, Esaki, N. 登録日 2002-03-10 公開日 2002-06-05 最終更新日 2023-11-15 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Reaction mechanism of alanine racemase from Bacillus stearothermophilus: x-ray crystallographic studies of the enzyme bound with N-(5'-phosphopyridoxyl)alanine. J.Biol.Chem., 277, 2002
1R80	Glycosyltransferase B in complex with 3-amino-acceptor analog inhibitor and uridine diphosphate 分子名称: Glycoprotein-fucosylgalactoside alpha-galactosyltransferase, MANGANESE (II) ION, MERCURY (II) ION, ... 著者 Nguyen, H.P, Seto, N.O.L, Cai, Y, Leinala, E.K, Borisova, S.N, Palcic, M.M, Evans, S.V. 登録日 2003-10-22 公開日 2004-02-10 最終更新日 2024-05-29 実験手法 X-RAY DIFFRACTION (1.65 Å) 主引用文献 The influence of an intramolecular hydrogen bond in differential recognition of inhibitory acceptor analogs by human ABO(H) blood group A and B glycosyltransferases J.Biol.Chem., 278, 2003
1RF9	Crystal structure of cytochrome P450-cam with a fluorescent probe D-4-AD (Adamantane-1-carboxylic acid-5-dimethylamino-naphthalene-1-sulfonylamino-butyl-amide) 分子名称: 1,2-ETHANEDIOL, ADAMANTANE-1-CARBOXYLIC ACID-5-DIMETHYLAMINO-NAPHTHALENE-1-SULFONYLAMINO-BUTYL-AMIDE, Cytochrome P450-cam, ... 著者 Hays, A.-M.A, Dunn, A.R, Gray, H.B, Stout, C.D, Goodin, D.B. 登録日 2003-11-07 公開日 2004-11-16 最終更新日 2023-08-23 実験手法 X-RAY DIFFRACTION (1.8 Å) 主引用文献 Conformational States of Cytochrome P450cam Revealed by Trapping of synthetic Molecular Wires J.Mol.Biol., 344, 2004
1R7V	Glycosyltransferase A in complex with 3-amino-acceptor analog inhibitor 分子名称: Glycoprotein-fucosylgalactoside alpha-N-acetylgalactosaminyltransferase, MERCURY (II) ION, alpha-L-fucopyranose-(1-2)-hexyl 3-amino-3-deoxy-beta-D-galactopyranoside 著者 Nguyen, H.P, Seto, N.O.L, Cai, Y, Leinala, E.K, Borisova, S.N, Palcic, M.M, Evans, S.V. 登録日 2003-10-22 公開日 2004-02-10 最終更新日 2024-05-29 実験手法 X-RAY DIFFRACTION (2.09 Å) 主引用文献 The influence of an intramolecular hydrogen bond in differential recognition of inhibitory acceptor analogs by human ABO(H) blood group A and B glycosyltransferases J.Biol.Chem., 278, 2003
3G96	Crystal structure of the Bacillus anthracis glmS ribozyme bound to MaN6P 分子名称: 2-amino-2-deoxy-6-O-phosphono-alpha-D-mannopyranose, GLMS RIBOZYME, MAGNESIUM ION, ... 著者 Strobel, S.A, Cochrane, J.C, Lipchock, S.V, Smith, K.D. 登録日 2009-02-12 公開日 2009-11-03 最終更新日 2024-02-21 実験手法 X-RAY DIFFRACTION (3.01 Å) 主引用文献 Structural and chemical basis for glucosamine 6-phosphate binding and activation of the glmS ribozyme Biochemistry, 48, 2009
1R81	Glycosyltransferase A in complex with 3-amino-acceptor analog inhibitor and uridine diphosphate-N-acetyl-galactose 分子名称: Glycoprotein-fucosylgalactoside alpha-N-acetylgalactosaminyltransferase, MERCURY (II) ION, URIDINE-DIPHOSPHATE-N-ACETYLGALACTOSAMINE, ... 著者 Nguyen, H.P, Seto, N.O.L, Cai, Y, Leinala, E.K, Borisova, S.N, Palcic, M.M, Evans, S.V. 登録日 2003-10-22 公開日 2004-02-10 最終更新日 2024-05-29 実験手法 X-RAY DIFFRACTION (1.75 Å) 主引用文献 The influence of an intramolecular hydrogen bond in differential recognition of inhibitory acceptor analogs by human ABO(H) blood group A and B glycosyltransferases J.Biol.Chem., 278, 2003
417D	A THYMINE-LIKE BASE ANALOGUE FORMS WOBBLE PAIRS WITH ADENINE 分子名称: DNA (5'-D(*CP*AP*CP*GP*(C46)P*G)-3') 著者 Lin, P.K.T, Schuerman, M.H, Moore, G.S, Van Meervelt, L, Loakes, D, Brown, D.M, Moore, M.H. 登録日 1998-07-15 公開日 1998-09-30 最終更新日 2024-04-03 実験手法 X-RAY DIFFRACTION (1.5 Å) 主引用文献 A thymine-like base analogue forms wobble pairs with adenine in a Z-DNA duplex. J.Mol.Biol., 282, 1998
3GEN	The 1.6 A crystal structure of human bruton's tyrosine kinase bound to a pyrrolopyrimidine-containing compound 分子名称: 4-Amino-5-(4-phenoxyphenyl)-7H-pyrrolo[2,3-d]pyrimidin-7-yl-cyclopentane, Tyrosine-protein kinase BTK 著者 Marcotte, D.J, Liu, Y.T, Arduini, R.M, Hession, C.A, Miatkowski, K, Wildes, C.P, Cullen, P.F, Hopkins, B, Mertsching, E, Jenkins, T.J, Romanowski, M.J, Baker, D.P, Silvian, L.F. 登録日 2009-02-25 公開日 2010-01-19 最終更新日 2024-03-13 実験手法 X-RAY DIFFRACTION (1.6 Å) 主引用文献 Structures of human Bruton's tyrosine kinase in active and inactive conformations suggest a mechanism of activation for TEC family kinases. Protein Sci., 19, 2010
1D3D	CRYSTAL STRUCTURE OF HUMAN ALPHA THROMBIN IN COMPLEX WITH BENZOTHIOPHENE INHIBITOR 4 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 3-(3-BROMO-4-PYRROLIDIN-1-YLMETHYL-BENZYL)-2-[4-PYRROLIDIN-1-YL-ETHOXY)-PHENYL]-BENZO[B]THIOPHEN-6-OL, ALPHA-THROMBIN, ... 著者 Chirgadze, N.Y. 登録日 1999-09-29 公開日 2000-10-04 最終更新日 2020-07-29 実験手法 X-RAY DIFFRACTION (2.04 Å) 主引用文献 The crystal structures of human alpha-thrombin complexed with active site-directed diamino benzo[b]thiophene derivatives: a binding mode for a structurally novel class of inhibitors Protein Sci., 9, 2000
1D3P	CRYSTAL STRUCTURE OF HUMAN APLHA-THROMBIN IN COMPLEX WITH BENZO[B]THIOPHENE INHIBITOR 3 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 3-[4-(2-PYRROLIDIN-1-YL-ETHOXY)-BENZYL]-2-4-(2-PYRROLIDIN-1-YL-ETHOXY)-PHENYL] -BENZO[B]THIOPHEN-6-OL, ALPHA-THROMBIN, ... 著者 Chirgadze, N.Y. 登録日 1999-09-30 公開日 2000-10-04 最終更新日 2020-07-29 実験手法 X-RAY DIFFRACTION (2.1 Å) 主引用文献 The crystal structures of human alpha-thrombin complexed with active site-directed diamino benzo[b]thiophene derivatives: a binding mode for a structurally novel class of inhibitors. Protein Sci., 9, 2000
3BIW	Crystal structure of the Neuroligin-1/Neurexin-1beta synaptic adhesion complex 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, ... 著者 Arac, D, Boucard, A.A, Ozkan, E, Strop, P, Newell, E, Sudhof, T.C, Brunger, A.T. 登録日 2007-12-01 公開日 2007-12-18 最終更新日 2020-07-29 実験手法 X-RAY DIFFRACTION (3.5 Å) 主引用文献 Structures of Neuroligin-1 and the Neuroligin-1/Neurexin-1beta Complex Reveal Specific Protein-Protein and Protein-Ca(2+) Interactions. Neuron, 56, 2007
4N4D	Structure of ThiT with AV-38 bound 分子名称: 2-(2-METHOXYETHOXY)ETHANOL, 3,6,9,12,15,18-HEXAOXAICOSANE-1,20-DIOL, CHLORIDE ION, ... 著者 Swier, L.J.Y.M, Guskov, A, Slotboom, D.J. 登録日 2013-10-08 公開日 2014-09-17 最終更新日 2023-09-20 実験手法 X-RAY DIFFRACTION (2.4 Å) 主引用文献 Structural studies on the thiamine binding protein ThiT To be Published
3B4B	T. tengcongensis glmS ribozyme with G40A mutation, bound to glucosamine-6-phosphate and a substrate RNA with a 2'5'-phosphodiester linkage 分子名称: 2-amino-2-deoxy-6-O-phosphono-alpha-D-glucopyranose, 3'-DEOXYADENOSINE, MAGNESIUM ION, ... 著者 Klein, D.J, Ferre-D'Amare, A.R. 登録日 2007-10-23 公開日 2007-12-11 最終更新日 2024-02-21 実験手法 X-RAY DIFFRACTION (2.7 Å) 主引用文献 Essential Role of an Active-Site Guanine in glmS Ribozyme Catalysis. J.Am.Chem.Soc., 129, 2007
1M2Z	Crystal structure of a dimer complex of the human glucocorticoid receptor ligand-binding domain bound to dexamethasone and a TIF2 coactivator motif 分子名称: DEXAMETHASONE, glucocorticoid receptor, nuclear receptor coactivator 2, ... 著者 Bledsoe, R.B, Montana, V.G, Stanley, T.B, Delves, C.J, Apolito, C.J, Mckee, D.D, Consler, T.G, Parks, D.J, Stewart, E.L, Willson, T.M, Lambert, M.H, Moore, J.T, Pearce, K.H, Xu, H.E. 登録日 2002-06-26 公開日 2003-07-15 最終更新日 2024-04-03 実験手法 X-RAY DIFFRACTION (2.5 Å) 主引用文献 Crystal Structure of the Glucocorticoid Receptor Ligand Binding Domain Reveals a Novel Mode of Receptor Dimerization and Coactivator Recognition Cell(Cambridge,Mass.), 110, 2002
3BE8	Crystal structure of the synaptic protein neuroligin 4 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, CHLORIDE ION, CITRATE ANION, ... 著者 Fabrichny, I.P, Leone, P, Sulzenbacher, G, Comoletti, D, Miller, M.T, Taylor, P, Bourne, Y, Marchot, P. 登録日 2007-11-16 公開日 2008-01-29 最終更新日 2023-11-01 実験手法 X-RAY DIFFRACTION (2.2 Å) 主引用文献 Structural Analysis of the Synaptic Protein Neuroligin and Its beta-Neurexin Complex: Determinants for Folding and Cell Adhesion Neuron, 56, 2007
1TT0	Crystal Structure of Pyranose 2-Oxidase 分子名称: ACETATE ION, DODECAETHYLENE GLYCOL, FLAVIN-ADENINE DINUCLEOTIDE, ... 著者 Hallberg, B.M, Leitner, C, Haltrich, D, Divne, C. 登録日 2004-06-21 公開日 2005-06-21 最終更新日 2024-02-14 実験手法 X-RAY DIFFRACTION (1.8 Å) 主引用文献 Crystal structure of the 270 kDa homotetrameric lignin-degrading enzyme pyranose 2-oxidase J.Mol.Biol., 341, 2004

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