Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

8TSP
DownloadVisualize
BU of 8tsp by Molmil
Open, inward-facing MsbA structure (OIF1)
分子名称: ATP-binding transport protein MsbA
著者Yang, B, Zhang, T, Lyu, J, Laganowsky, A.D, Zhao, M.
登録日2023-08-11
公開日2024-06-19
実験手法ELECTRON MICROSCOPY (3.9 Å)
主引用文献Native mass spectrometry captures snapshots of the MsbA transport cycle
To Be Published
8TSO
DownloadVisualize
BU of 8tso by Molmil
KDL bound, nucleotide-free MsbA in open, outward-facing conformation
分子名称: (2~{R},4~{R},5~{R},6~{R})-6-[(1~{R})-1,2-bis(oxidanyl)ethyl]-2-[(2~{R},4~{R},5~{R},6~{R})-6-[(1~{R})-1,2-bis(oxidanyl)ethyl]-2-carboxy-2-[[(2~{R},3~{S},4~{R},5~{R},6~{R})-5-[[(3~{R})-3-dodecanoyloxytetradecanoyl]amino]-6-[[(2~{R},3~{S},4~{R},5~{R},6~{R})-3-oxidanyl-5-[[(3~{R})-3-oxidanyltetradecanoyl]amino]-4-[(3~{R})-3-oxidanyltetradecanoyl]oxy-6-phosphonooxy-oxan-2-yl]methoxy]-3-phosphonooxy-4-[(3~{R})-3-tetradecanoyloxytetradecanoyl]oxy-oxan-2-yl]methoxy]-5-oxidanyl-oxan-4-yl]oxy-4,5-bis(oxidanyl)oxane-2-carboxylic acid, ATP-binding transport protein MsbA, PENTAETHYLENE GLYCOL MONODECYL ETHER
著者Yang, B, Zhang, T, Lyu, J, Laganowsky, A.D, Zhao, M.
登録日2023-08-11
公開日2024-06-19
実験手法ELECTRON MICROSCOPY (2.68 Å)
主引用文献Native mass spectrometry captures snapshots of the MsbA transport cycle
To Be Published
8TSQ
DownloadVisualize
BU of 8tsq by Molmil
Open, inward-facing MsbA structure (OIF2)
分子名称: ATP-binding transport protein MsbA
著者Yang, B, Zhang, T, Lyu, J, Laganowsky, A.D, Zhao, M.
登録日2023-08-11
公開日2024-06-19
実験手法ELECTRON MICROSCOPY (3.6 Å)
主引用文献Native mass spectrometry captures snapshots of the MsbA transport cycle
To Be Published
8TSS
DownloadVisualize
BU of 8tss by Molmil
Open, inward-facing MsbA structure (OIF3)
分子名称: ATP-binding transport protein MsbA
著者Yang, B, Zhang, T, Lyu, J, Laganowsky, A.D, Zhao, M.
登録日2023-08-11
公開日2024-06-19
実験手法ELECTRON MICROSCOPY (3.7 Å)
主引用文献Native mass spectrometry captures snapshots of the MsbA transport cycle
To Be Published
8KDX
DownloadVisualize
BU of 8kdx by Molmil
Tau-S214 Phosphorylation Inhibits Fyn Kinase Interaction and Increases the Decay Time of NMDAR-mediated Current
分子名称: Microtubule-associated protein tau, Tyrosine-protein kinase Fyn
著者Padavattan, S, Jos, S.
登録日2023-08-10
公開日2024-02-28
実験手法X-RAY DIFFRACTION (1.01 Å)
主引用文献Tau-S214 Phosphorylation Inhibits Fyn Kinase Interaction and Increases the Decay Time of NMDAR-mediated Current.
J.Mol.Biol., 436, 2024
8Q61
DownloadVisualize
BU of 8q61 by Molmil
Co-crystal structure of human AKT2 with compound 3
分子名称: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, 6-[4-(1-azanyl-3-methyl-3-oxidanyl-cyclobutyl)phenyl]-7-phenyl-1-propyl-pyrido[2,3-b][1,4]oxazin-2-one, GLYCEROL, ...
著者Harrison, T, Barker, O.
登録日2023-08-10
公開日2023-08-16
実験手法X-RAY DIFFRACTION (2.32 Å)
主引用文献Identification and development of a subtype-selective allosteric AKT inhibitor suitable for clinical development.
Sci Rep, 12, 2022
8TS0
DownloadVisualize
BU of 8ts0 by Molmil
Crystal Structure of human ASGR1 CRD (Carbohydrate Recognition Domain) bound to 8M24 Fab
分子名称: 8M24 Fab Heavy chain, 8M24 Fab Light chain, Asialoglycoprotein receptor 1, ...
著者Sampathkumar, P, Li, Y.
登録日2023-08-10
公開日2024-06-19
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Targeted protein degradation systems to enhance Wnt signaling.
Elife, 13, 2024
8Q62
DownloadVisualize
BU of 8q62 by Molmil
Early closed conformation of the g-tubulin ring complex
分子名称: Gamma-tubulin complex component 2, Gamma-tubulin complex component 3, Gamma-tubulin complex component 4, ...
著者Llorca, O, Serna, M, Fernandez-Leiro, R.
登録日2023-08-10
公開日2024-02-07
最終更新日2024-03-06
実験手法ELECTRON MICROSCOPY (3.72 Å)
主引用文献Transition of human gamma-tubulin ring complex into a closed conformation during microtubule nucleation.
Science, 383, 2024
8TRN
DownloadVisualize
BU of 8trn by Molmil
Actin 1 from T. gondii in filaments bound to MgADP and jasplakinolide
分子名称: ADENOSINE-5'-DIPHOSPHATE, Actin, Jasplakinolide, ...
著者Hvorecny, K.L, Sladewski, T.E, Heaslip, A.T, Kollman, J.M.
登録日2023-08-09
公開日2024-03-06
実験手法ELECTRON MICROSCOPY (3 Å)
主引用文献Toxoplasma gondii actin filaments are tuned for rapid disassembly and turnover.
Nat Commun, 15, 2024
8TRM
DownloadVisualize
BU of 8trm by Molmil
Actin 1 from T. gondii in filaments bound to MgADP
分子名称: ADENOSINE-5'-DIPHOSPHATE, Actin, MAGNESIUM ION
著者Hvorecny, K.L, Sladewski, T.E, Heaslip, A.T, Kollman, J.M.
登録日2023-08-09
公開日2024-03-06
実験手法ELECTRON MICROSCOPY (2.5 Å)
主引用文献Toxoplasma gondii actin filaments are tuned for rapid disassembly and turnover.
Nat Commun, 15, 2024
8Q5J
DownloadVisualize
BU of 8q5j by Molmil
Cytochrome P450 monooxygenase from Streptomyces scabiei (SscaCYP)
分子名称: Cytochrome P450 107B1, MAGNESIUM ION, PROTOPORPHYRIN IX CONTAINING FE
著者Opperman, D.J, Ebrecht, A.C.
登録日2023-08-09
公開日2024-04-03
実験手法X-RAY DIFFRACTION (1.48 Å)
主引用文献Natural alternative heme-environments allow efficient peroxygenase activity by cytochrome P450 monooxygenases
Catalysis Science And Technology, 13, 2023
8Q52
DownloadVisualize
BU of 8q52 by Molmil
A PBP-like protein built from fragments of different folds
分子名称: Leucine-specific-binding protein,Chemotaxis protein CheY, SULFATE ION
著者Shanmugaratnam, S, Toledo-Patino, S, Goetz, S.K, Farias-Rico, J.A, Hocker, B.
登録日2023-08-08
公開日2024-04-10
最終更新日2024-06-19
実験手法X-RAY DIFFRACTION (2.15 Å)
主引用文献Molecular handcraft of a well-folded protein chimera.
Febs Lett., 598, 2024
8TQS
DownloadVisualize
BU of 8tqs by Molmil
Complex of human thrombin (S195A) bound to a bivalent inhibitor comprised of DNA Aptamer HD22 conjugated to Dabigatran with a linker.
分子名称: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, 2-acetamido-2-deoxy-beta-D-glucopyranose, DNA (30-MER), ...
著者Krishnaswamy, S, Kumar, S.
登録日2023-08-08
公開日2024-05-01
最終更新日2024-05-22
実験手法X-RAY DIFFRACTION (2.207 Å)
主引用文献Aptameric hirudins as selective and reversible EXosite-ACTive site (EXACT) inhibitors.
Nat Commun, 15, 2024
8Q4G
DownloadVisualize
BU of 8q4g by Molmil
Thin filament from FIB milled relaxed left ventricular mouse myofibrils
分子名称: Actin, alpha cardiac muscle 1, Tropomyosin alpha-1 chain
著者Tamborrini, D, Wang, Z, Wagner, T, Tacke, S, Stabrin, M, Grange, M, Kho, A.L, Bennet, P, Rees, M, Gautel, M, Raunser, S.
登録日2023-08-06
公開日2023-11-01
最終更新日2023-12-06
実験手法ELECTRON MICROSCOPY (8 Å)
主引用文献Structure of the native myosin filament in the relaxed cardiac sarcomere.
Nature, 623, 2023
8TP1
DownloadVisualize
BU of 8tp1 by Molmil
ATP-2 state of Bcs1 (C7 symmetrized)
分子名称: ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, Mitochondrial chaperone BCS1
著者Zhan, J, Xia, D.
登録日2023-08-04
公開日2024-06-05
最終更新日2024-06-12
実験手法ELECTRON MICROSCOPY (3.02 Å)
主引用文献Conformations of Bcs1L undergoing ATP hydrolysis suggest a concerted translocation mechanism for folded iron-sulfur protein substrate.
Nat Commun, 15, 2024
8Q3O
DownloadVisualize
BU of 8q3o by Molmil
Bacterial transcription termination factor Rho + pppGpp
分子名称: MAGNESIUM ION, Transcription termination factor Rho, guanosine 5'-(tetrahydrogen triphosphate) 3'-(trihydrogen diphosphate)
著者Said, N, Hilal, T, Wahl, M.C.
登録日2023-08-04
公開日2023-09-27
実験手法ELECTRON MICROSCOPY (3 Å)
主引用文献Transcription termination factor rho polymerizes under stress.
Biorxiv, 2023
8Q3Q
DownloadVisualize
BU of 8q3q by Molmil
Bacterial transcription termination factor Rho G152D mutant
分子名称: ADENOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, Transcription termination factor Rho
著者Said, N, Hilal, T, Wahl, M.C.
登録日2023-08-04
公開日2023-09-27
最終更新日2024-05-29
実験手法ELECTRON MICROSCOPY (3.3 Å)
主引用文献Transcription termination factor rho polymerizes under stress.
Biorxiv, 2023
8Q3N
DownloadVisualize
BU of 8q3n by Molmil
Bacterial transcription termination factor Rho + ADP
分子名称: ADENOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, Transcription termination factor Rho
著者Said, N, Hilal, T, Wahl, M.C.
登録日2023-08-04
公開日2023-09-27
最終更新日2023-10-04
実験手法ELECTRON MICROSCOPY (2.63 Å)
主引用文献Transcription termination factor rho polymerizes under stress.
Biorxiv, 2023
8Q3P
DownloadVisualize
BU of 8q3p by Molmil
Bacterial transcription termination factor Rho G150D mutant
分子名称: ADENOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, Transcription termination factor Rho
著者Said, N, Hilal, T, Wahl, M.C.
登録日2023-08-04
公開日2023-09-27
最終更新日2024-05-22
実験手法ELECTRON MICROSCOPY (3.5 Å)
主引用文献Transcription termination factor rho polymerizes under stress.
Biorxiv, 2023
8TPL
DownloadVisualize
BU of 8tpl by Molmil
ATP-2 state of Bcs1 (unsymmetrized)
分子名称: ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, Mitochondrial chaperone BCS1
著者Zhan, J, Xia, D.
登録日2023-08-04
公開日2024-06-05
最終更新日2024-06-12
実験手法ELECTRON MICROSCOPY (3.46 Å)
主引用文献Conformations of Bcs1L undergoing ATP hydrolysis suggest a concerted translocation mechanism for folded iron-sulfur protein substrate.
Nat Commun, 15, 2024
8Q3L
DownloadVisualize
BU of 8q3l by Molmil
Human Gamma-D Crystallin R36S fresh serial crystallographic structure
分子名称: Gamma-crystallin D
著者Yorke, B.A, Hill, J.A.
登録日2023-08-04
公開日2024-04-17
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Human Gamma-D Crystallin R36S fresh serial crystallographic structure
To Be Published
8Q3C
DownloadVisualize
BU of 8q3c by Molmil
Structure of Selenomonas ruminantium lactate dehydrogenase I85R mutant
分子名称: CHLORIDE ION, L-lactate dehydrogenase, NITRATE ION, ...
著者Bertrand, Q, Coquille, S, Iorio, A, Sterpone, F, Madern, D.
登録日2023-08-03
公開日2023-11-01
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (3.1 Å)
主引用文献Biochemical, structural and dynamical characterizations of the lactate dehydrogenase from Selenomonas ruminantium provide information about an intermediate evolutionary step prior to complete allosteric regulation acquisition in the super family of lactate and malate dehydrogenases.
J.Struct.Biol., 215, 2023
8TO0
DownloadVisualize
BU of 8to0 by Molmil
48-nm repeating structure of doublets from mouse sperm flagella
分子名称: Cilia- and flagella- associated protein 210, Cilia- and flagella-associated protein 107, Cilia- and flagella-associated protein 141, ...
著者Chen, Z, Shiozak, M, Hass, K.M, Skinner, W, Zhao, S, Guo, C, Polacco, B.J, Yu, Z, Krogan, N.J, Kaake, R.M, Vale, R.D, Agard, D.A.
登録日2023-08-02
公開日2023-11-01
最終更新日2023-11-22
実験手法ELECTRON MICROSCOPY (7.7 Å)
主引用文献De novo protein identification in mammalian sperm using in situ cryoelectron tomography and AlphaFold2 docking.
Cell, 186, 2023
8TNK
DownloadVisualize
BU of 8tnk by Molmil
The crystal structure of the T252E mutant of CYP199A4 bound to 4-benzylbenzoic acid
分子名称: 4-benzylbenzoic acid, CHLORIDE ION, Cytochrome P450, ...
著者Podgorski, M.N, Bell, S.G.
登録日2023-08-02
公開日2023-10-25
実験手法X-RAY DIFFRACTION (1.79 Å)
主引用文献Characterisation of the heme aqua-ligand coordination environment in an engineered peroxygenase cytochrome P450 variant.
J.Inorg.Biochem., 249, 2023
8TNR
DownloadVisualize
BU of 8tnr by Molmil
Cryo-EM structure of DDB1dB:CRBN:PT-179:SD40, conformation 2
分子名称: 2-[(3S)-2,6-dioxopiperidin-3-yl]-5-(morpholin-4-yl)-1H-isoindole-1,3(2H)-dione, DNA damage-binding protein 1, Maltose/maltodextrin-binding periplasmic protein,SD40, ...
著者Roy Burman, S.S, Hunkeler, M, Fischer, E.S.
登録日2023-08-02
公開日2024-03-13
最終更新日2024-04-03
実験手法ELECTRON MICROSCOPY (2.5 Å)
主引用文献Continuous evolution of compact protein degradation tags regulated by selective molecular glues.
Science, 383, 2024

222415

件を2024-07-10に公開中

PDB statisticsPDBj update infoContact PDBjnumon