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4V7H
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Structure of the 80S rRNA and proteins and P/E tRNA for eukaryotic ribosome based on cryo-EM map of Thermomyces lanuginosus ribosome at 8.9A resolution
分子名称: 18S rRNA, 26S ribosomal RNA, 40S ribosomal protein S0(A), ...
著者Taylor, D.J, Devkota, B, Huang, A.D, Topf, M, Narayanan, E, Sali, A, Harvey, S.C, Frank, J.
登録日2009-09-22
公開日2014-07-09
最終更新日2024-02-28
実験手法ELECTRON MICROSCOPY (8.9 Å)
主引用文献Comprehensive molecular structure of the eukaryotic ribosome.
Structure, 17, 2009
4V42
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Crystal structure of the ribosome at 5.5 A resolution.
分子名称: 30S 16S RIBOSOMAL RNA, 30S RIBOSOMAL PROTEIN S10, 30S RIBOSOMAL PROTEIN S11, ...
著者Yusupov, M.M, Yusupova, G.Z, Baucom, A, Lieberman, K, Earnest, T.N, Cate, J.H.D, Noller, H.F.
登録日2001-03-30
公開日2014-07-09
最終更新日2024-05-22
実験手法X-RAY DIFFRACTION (5.5 Å)
主引用文献Crystal structure of the ribosome at 5.5 A resolution
Science, 292, 2001
4W5Q
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The Crystal Structure of Human Argonaute2 Bound to a Guide and Target RNA Containing Seed Pairing from 2-8
分子名称: MAGNESIUM ION, PHENOL, Protein argonaute-2, ...
著者Schirle, N.T, MacRae, I.J.
登録日2014-08-18
公開日2014-11-12
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (3.101 Å)
主引用文献Gene regulation. Structural basis for microRNA targeting.
Science, 346, 2014
4W8I
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Crystal structure of LpSPL/Lpp2128, Legionella pneumophila sphingosine-1 phosphate lyase
分子名称: Probable sphingosine-1-phosphate lyase
著者Stogios, P.J, Daniels, C, Skarina, T, Cuff, M, Di Leo, R, Savchenko, A, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
登録日2014-08-24
公開日2014-11-05
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.85 Å)
主引用文献Legionella pneumophila S1P-lyase targets host sphingolipid metabolism and restrains autophagy.
Proc.Natl.Acad.Sci.USA, 113, 2016
4W4U
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Structure of yeast SAGA DUBm with Sgf73 Y57A mutant at 2.8 angstroms resolution
分子名称: SAGA-associated factor 11, SAGA-associated factor 73, Transcription and mRNA export factor SUS1, ...
著者Wolberger, C, Yan, M.
登録日2014-08-15
公開日2015-07-01
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Uncovering the role of Sgf73 in maintaining SAGA deubiquitinating module structure and activity.
J.Mol.Biol., 427, 2015
4W5R
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The Crystal Structure of Human Argonaute2 Bound to a Guide and Target RNA Containing Seed Pairing from 2-8 (Long Target)
分子名称: ISOPROPYL ALCOHOL, MAGNESIUM ION, PHENOL, ...
著者Schirle, N.T, MacRae, I.J.
登録日2014-08-18
公開日2014-11-12
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Gene regulation. Structural basis for microRNA targeting.
Science, 346, 2014
4W8E
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Structure of MST3 with a pyrrolopyrimidine inhibitor (PF-06645342)
分子名称: 3-{4-[(2R)-2-(5-methyl-1,2,4-oxadiazol-3-yl)morpholin-4-yl]-7H-pyrrolo[2,3-d]pyrimidin-5-yl}benzonitrile, Serine/threonine-protein kinase 24 36 kDa subunit
著者Jasti, J, Song, X, Griffor, M, Kurumbail, R.G.
登録日2014-08-24
公開日2015-03-18
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (1.79 Å)
主引用文献Discovery and preclinical profiling of 3-[4-(morpholin-4-yl)-7H-pyrrolo[2,3-d]pyrimidin-5-yl]benzonitrile (PF-06447475), a highly potent, selective, brain penetrant, and in vivo active LRRK2 kinase inhibitor.
J.Med.Chem., 58, 2015
4W8D
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Crystal structure of MST3 with a pyrrolopyrimidine inhibitor (PF-06454589).
分子名称: 5-(1-methyl-1H-pyrazol-4-yl)-4-(morpholin-4-yl)-7H-pyrrolo[2,3-d]pyrimidine, Serine/threonine-protein kinase 24 36 kDa subunit
著者Jasti, J, Song, X, Griffor, M, Kurumbail, R.G.
登録日2014-08-24
公開日2015-03-18
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (1.77 Å)
主引用文献Discovery and preclinical profiling of 3-[4-(morpholin-4-yl)-7H-pyrrolo[2,3-d]pyrimidin-5-yl]benzonitrile (PF-06447475), a highly potent, selective, brain penetrant, and in vivo active LRRK2 kinase inhibitor.
J.Med.Chem., 58, 2015
4V6X
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Structure of the human 80S ribosome
分子名称: 18S ribosomal RNA, 28S ribosomal RNA, 40S ribosomal protein S10, ...
著者Anger, A.M, Armache, J.-P, Berninghausen, O, Habeck, M, Subklewe, M, Wilson, D.N, Beckmann, R.
登録日2013-02-27
公開日2014-07-09
最終更新日2023-02-01
実験手法ELECTRON MICROSCOPY (5 Å)
主引用文献Structures of the human and Drosophila 80S ribosome.
Nature, 497, 2013
8GA8
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BU of 8ga8 by Molmil
Structure of the yeast (HDAC) Rpd3L complex
分子名称: Histone deacetylase RPD3, Transcriptional regulatory protein DEP1, Transcriptional regulatory protein PHO23, ...
著者Patel, A.B, Radhakrishnan, I, He, Y.
登録日2023-02-22
公開日2023-07-12
最終更新日2024-06-19
実験手法ELECTRON MICROSCOPY (3.5 Å)
主引用文献Cryo-EM structure of the Saccharomyces cerevisiae Rpd3L histone deacetylase complex.
Nat Commun, 14, 2023
8GBT
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Time-resolve SFX structure of a photoproduct of carbon monoxide complex of bovine cytochrome c oxidase
分子名称: (1R)-2-{[{[(2S)-2,3-DIHYDROXYPROPYL]OXY}(HYDROXY)PHOSPHORYL]OXY}-1-[(PALMITOYLOXY)METHYL]ETHYL (11E)-OCTADEC-11-ENOATE, (1S)-2-{[(2-AMINOETHOXY)(HYDROXY)PHOSPHORYL]OXY}-1-[(STEAROYLOXY)METHYL]ETHYL (5E,8E,11E,14E)-ICOSA-5,8,11,14-TETRAENOATE, (7R,17E,20E)-4-HYDROXY-N,N,N-TRIMETHYL-9-OXO-7-[(PALMITOYLOXY)METHYL]-3,5,8-TRIOXA-4-PHOSPHAHEXACOSA-17,20-DIEN-1-AMINIUM 4-OXIDE, ...
著者Ishigami, I, Yeh, S.-R, Rousseau, D.L.
登録日2023-02-28
公開日2023-09-20
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Detection of a Geminate Photoproduct of Bovine Cytochrome c Oxidase by Time-Resolved Serial Femtosecond Crystallography.
J.Am.Chem.Soc., 145, 2023
8H7A
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BU of 8h7a by Molmil
Crystal structure of the dimer form KAT6A WH domain with its bound double stranded DNA
分子名称: DNA (5'-D(*GP*GP*TP*CP*CP*GP*AP*CP*GP*GP*AP*CP*C)-3'), DNA (5'-D(*GP*GP*TP*CP*CP*GP*TP*CP*GP*GP*AP*CP*C)-3'), Histone acetyltransferase KAT6A, ...
著者Wang, Z, Cao, Y.
登録日2022-10-19
公開日2023-01-18
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.92 Å)
主引用文献The histone acetyltransferase KAT6A is recruited to unmethylated CpG islands via a DNA binding winged helix domain.
Nucleic Acids Res., 51, 2023
8HGO
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BU of 8hgo by Molmil
The EGF-bound EGFR/HER2 ectodomain complex
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Epidermal growth factor, ...
著者Zhang, Z, Bai, X.
登録日2022-11-15
公開日2023-02-08
最終更新日2023-03-01
実験手法ELECTRON MICROSCOPY (3.31 Å)
主引用文献Structure and dynamics of the EGFR/HER2 heterodimer.
Cell Discov, 9, 2023
5OHX
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BU of 5ohx by Molmil
Structure of active cystathionine B-synthase from Apis mellifera
分子名称: Cystathionine beta-synthase, PROTOPORPHYRIN IX CONTAINING FE, PYRIDOXAL-5'-PHOSPHATE
著者Gimenez-Mascarell, P, Majtan, T, Oyenarte, I, Ereno-Orbea, J, Majtan, J, Kraus, J.P, Klaudiny, J, Martinez-Cruz, L.A.
登録日2017-07-18
公開日2018-01-03
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (3.2 Å)
主引用文献Crystal structure of cystathionine beta-synthase from honeybee Apis mellifera.
J. Struct. Biol., 202, 2018
8FB9
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BU of 8fb9 by Molmil
LH2-LH3 antenna in anti parallel configuration embedded in a nanodisc
分子名称: BACTERIOCHLOROPHYLL A, LYCOPENE, Light-harvesting protein B-800/850 alpha chain, ...
著者Toporik, H, Harris, D, Schlau-Cohen, G.S, Mazor, Y.
登録日2022-11-29
公開日2023-07-19
最終更新日2024-06-19
実験手法ELECTRON MICROSCOPY (6.4 Å)
主引用文献Elucidating interprotein energy transfer dynamics within the antenna network from purple bacteria.
Proc.Natl.Acad.Sci.USA, 120, 2023
8FBB
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BU of 8fbb by Molmil
LH2-LH3 antenna in parallel configuration embedded in a nanodisc
分子名称: BACTERIOCHLOROPHYLL A, LYCOPENE, Light-harvesting protein B-800/850 alpha chain, ...
著者Toporik, H, Harris, D, Schlau-Cohen, G.S, Mazor, Y.
登録日2022-11-29
公開日2023-07-19
最終更新日2024-06-19
実験手法ELECTRON MICROSCOPY (11.3 Å)
主引用文献Elucidating interprotein energy transfer dynamics within the antenna network from purple bacteria.
Proc.Natl.Acad.Sci.USA, 120, 2023
8HEW
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Potato 14-3-3 St14f
分子名称: 14-3-3 protein, StFDL1 peptide
著者Taoka, K, Kawahara, I, Shinya, S, Harada, K, Muranaka, T, Furuita, K, Nakagawa, A, Fujiwara, T, Tsuji, H, Kojima, C.
登録日2022-11-08
公開日2023-09-20
実験手法X-RAY DIFFRACTION (2.59 Å)
主引用文献Multifunctional chemical inhibitors of the florigen activation complex discovered by structure-based high-throughput screening.
Plant J., 112, 2022
3S6I
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BU of 3s6i by Molmil
Schizosaccaromyces pombe 3-methyladenine DNA glycosylase (Mag1) in complex with abasic-DNA.
分子名称: (5'-D(*AP*AP*GP*AP*CP*TP*TP*GP*GP*AP*C)-3'), (5'-D(*TP*GP*TP*CP*CP*AP*(3DR)P*GP*TP*CP*T)-3'), DNA-3-methyladenine glycosylase 1, ...
著者Adhikary, S, Eichman, B.F.
登録日2011-05-25
公開日2011-12-14
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.28 Å)
主引用文献Analysis of substrate specificity of Schizosaccharomyces pombe Mag1 alkylpurine DNA glycosylase.
Embo Rep., 12, 2011
8FBX
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Selenosugar synthase SenB from Variovorax paradoxus
分子名称: CHLORIDE ION, SODIUM ION, Selenosugar synthase SenB
著者Ireland, K.A, Davis, K.M.
登録日2022-11-30
公開日2023-11-22
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (2.25 Å)
主引用文献Structural Characterization and Ligand-Induced Conformational Changes of SenB, a Se-Glycosyltransferase Involved in Selenoneine Biosynthesis.
Biochemistry, 62, 2023
8G2H
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BU of 8g2h by Molmil
Crystal Structure of PRMT4 with Compound YD1113
分子名称: 5'-S-[2-(benzylcarbamamido)ethyl]-5'-thioadenosine, GLYCEROL, Histone-arginine methyltransferase CARM1, ...
著者Song, X, Dong, A, Deng, Y, Huang, R, Arrowsmith, C.H, Edwards, A.M, Min, J, Structural Genomics Consortium (SGC)
登録日2023-02-03
公開日2023-12-13
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (1.49 Å)
主引用文献A unique binding pocket induced by a noncanonical SAH mimic to develop potent and selective PRMT inhibitors.
Acta Pharm Sin B, 13, 2023
8FTF
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BU of 8ftf by Molmil
CryoEM strucutre of 33-mer RBM3 of the Salmonella MS-ring
分子名称: Flagellar M-ring protein
著者Singh, P.S, Nakagawa, T, Cecchini, G, Iverson, T.M.
登録日2023-01-12
公開日2023-05-31
最終更新日2024-06-19
実験手法ELECTRON MICROSCOPY (2.9 Å)
主引用文献CryoEM structure of a post-assembly MS-ring reveals plasticity in stoichiometry and conformation.
Plos One, 18, 2023
8FTE
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CryoEM strucutre of 22-mer RBM2 of the Salmonella MS-ring
分子名称: Flagellar M-ring protein
著者Singh, P.S, Nakagawa, T, Cecchini, G, Iverson, T.M.
登録日2023-01-12
公開日2023-05-31
最終更新日2024-06-19
実験手法ELECTRON MICROSCOPY (3.8 Å)
主引用文献CryoEM structure of a post-assembly MS-ring reveals plasticity in stoichiometry and conformation.
Plos One, 18, 2023
8G2F
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Crystal Structure of PRMT3 with Compound II710
分子名称: 5'-S-[3-(N'-benzylcarbamimidamido)propyl]-5'-thioadenosine, Protein arginine N-methyltransferase 3
著者Song, X, Dong, A, Deng, Y, Huang, R, Arrowsmith, C.H, Edwards, A.M, Min, J, Structural Genomics Consortium (SGC)
登録日2023-02-03
公開日2023-05-10
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.06 Å)
主引用文献A unique binding pocket induced by a noncanonical SAH mimic to develop potent and selective PRMT inhibitors.
Acta Pharm Sin B, 13, 2023
3BUS
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BU of 3bus by Molmil
Crystal Structure of RebM
分子名称: Methyltransferase, S-ADENOSYL-L-HOMOCYSTEINE
著者McCoy, J.G, Singh, S, Bingman, C.A, Thorson, J.S, Phillips Jr, G.N.
登録日2008-01-03
公開日2008-03-25
最終更新日2017-10-25
実験手法X-RAY DIFFRACTION (2.65 Å)
主引用文献Structure and mechanism of the rebeccamycin sugar 4'-O-methyltransferase RebM.
J.Biol.Chem., 283, 2008
6XYW
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Structure of the plant mitochondrial ribosome
分子名称: 28S ribosomal S34 protein, 3-hydroxyisobutyryl-CoA hydrolase-like protein 2, mitochondrial, ...
著者Soufari, H, Waltz, F, Bochler, A, Giege, P, Hashem, Y.
登録日2020-01-31
公開日2020-04-15
最終更新日2020-04-29
実験手法ELECTRON MICROSCOPY (3.86 Å)
主引用文献Cryo-EM structure of the RNA-rich plant mitochondrial ribosome.
Nat.Plants, 6, 2020

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