PDB: 2869 件ウェブページステータス検索Chemie searchBIRD

---

4YM7	RNA polymerase I structure with an alternative dimer hinge 分子名称: DNA-directed RNA polymerase I subunit RPA12, DNA-directed RNA polymerase I subunit RPA135, DNA-directed RNA polymerase I subunit RPA14, ... 著者 Kostrewa, D, Kuhn, C.-D, Engel, C, Cramer, P. 登録日 2015-03-06 公開日 2015-09-09 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (5.5 Å) 主引用文献 An alternative RNA polymerase I structure reveals a dimer hinge. Acta Crystallogr.,Sect.D, 71, 2015
4Y5Z	T=1 capsid structure of SeMV Ndel65CP fused with B-domain of S. aureus protein SpA at the N-terminus (P1 crystal form) 分子名称: Immunoglobulin G-binding protein A,Coat protein, SULFATE ION 著者 Gulati, A, Murthy, M.R.N. 登録日 2015-02-12 公開日 2016-01-20 最終更新日 2023-11-29 実験手法 X-RAY DIFFRACTION (2.95 Å) 主引用文献 Structural studies on chimeric Sesbania mosaic virus coat protein: Revisiting SeMV assembly. Virology, 489, 2015
4YBB	High-resolution structure of the Escherichia coli ribosome 分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, 1,2-ETHANEDIOL, 1,4-DIAMINOBUTANE, ... 著者 Noeske, J, Wasserman, M.R, Terry, D.S, Altman, R.B, Blanchard, S.C, Cate, J.H.D. 登録日 2015-02-18 公開日 2015-03-18 最終更新日 2023-11-15 実験手法 X-RAY DIFFRACTION (2.1 Å) 主引用文献 High-resolution structure of the Escherichia coli ribosome. Nat.Struct.Mol.Biol., 22, 2015
4YD9	Crystal structure of squid hemocyanin 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CU2-O2 CLUSTER, alpha-D-mannopyranose-(1-3)-[alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ... 著者 Matsuno, A, Gai, Z, Kato, K, Tanaka, Y, Yao, M. 登録日 2015-02-21 公開日 2015-10-14 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (3 Å) 主引用文献 Crystal Structure of the 3.8-MDa Respiratory Supermolecule Hemocyanin at 3.0 angstrom Resolution Structure, 23, 2015
4YUU	Crystal structure of oxygen-evolving photosystem II from a red alga 分子名称: 1,2-DI-O-ACYL-3-O-[6-DEOXY-6-SULFO-ALPHA-D-GLUCOPYRANOSYL]-SN-GLYCEROL, 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE, 1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE, ... 著者 Ago, H, Shen, J.-R. 登録日 2015-03-19 公開日 2016-01-20 最終更新日 2020-02-05 実験手法 X-RAY DIFFRACTION (2.7700038 Å) 主引用文献 Novel Features of Eukaryotic Photosystem II Revealed by Its Crystal Structure Analysis from a Red Alga J.Biol.Chem., 291, 2016
4YPB	Precleavage 70S structure of the P. vulgaris HigB DeltaH92 toxin bound to the AAA codon 分子名称: 16S rRNA, 23S rRNA, 30S ribosomal protein S10, ... 著者 Schureck, M.A, Dunkle, J.A, Maehigashi, T, Dunham, C.M. 登録日 2015-03-12 公開日 2015-10-21 最終更新日 2023-09-27 実験手法 X-RAY DIFFRACTION (3.4 Å) 主引用文献 Defining the mRNA recognition signature of a bacterial toxin protein. Proc.Natl.Acad.Sci.USA, 112, 2015
1W5C	Photosystem II from Thermosynechococcus elongatus 分子名称: 2,3-DIMETHYL-5-(3,7,11,15,19,23,27,31,35-NONAMETHYL-2,6,10,14,18,22,26,30,34-HEXATRIACONTANONAENYL-2,5-CYCLOHEXADIENE-1,4-DIONE-2,3-DIMETHYL-5-SOLANESYL-1,4-BENZOQUINONE, BETA-CAROTENE, CHLOROPHYLL A, ... 著者 Biesiadka, J, Loll, B, Kern, J, Irrgang, K.-D, Saenger, W. 登録日 2004-08-06 公開日 2004-12-21 最終更新日 2014-01-08 実験手法 X-RAY DIFFRACTION (3.2 Å) 主引用文献 Crystal Structure of Cyanobacterial Photosystem II at 3.2 A Resolution: A Closer Look at the Mn- Cluster Phys.Chem.Chem.Phys., 6, 2004
4ZER	Crystal structure of the Onc112 antimicrobial peptide bound to the Thermus thermophilus 70S ribosome 分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, 16s ribosomal RNA, 23s ribosomal RNA, ... 著者 Seefeldt, A.C, Nguyen, F, Antunes, S, Perebaskine, N, Graf, M, Arenz, S, Inampudi, K.K, Douat, C, Guichard, G, Wilson, D.N, Innis, C.A. 登録日 2015-04-20 公開日 2015-05-20 最終更新日 2024-04-24 実験手法 X-RAY DIFFRACTION (3.1 Å) 主引用文献 The proline-rich antimicrobial peptide Onc112 inhibits translation by blocking and destabilizing the initiation complex. Nat.Struct.Mol.Biol., 22, 2015
4ZX9	X-ray crystal structure of PfA-M17 in complex with hydroxamic acid-based inhibitor 10b 分子名称: CARBONATE ION, DIMETHYL SULFOXIDE, GLYCEROL, ... 著者 Drinkwater, N, McGowan, S. 登録日 2015-05-20 公開日 2016-03-30 最終更新日 2023-09-27 実験手法 X-RAY DIFFRACTION (2.6 Å) 主引用文献 Potent dual inhibitors of Plasmodium falciparum M1 and M17 aminopeptidases through optimization of S1 pocket interactions. Eur.J.Med.Chem., 110, 2016
3IEL	Crystal Structure of TTHA0252 from Thermus thermophilus HB8 complexed with UMP 分子名称: CITRATE ANION, Ribonuclease TTHA0252, SULFATE ION, ... 著者 Ishikawa, H, Nakagawa, N, Kuramitsu, S, Yokoyama, S, Masui, R. 登録日 2009-07-23 公開日 2010-07-28 最終更新日 2023-11-01 実験手法 X-RAY DIFFRACTION (2.35 Å) 主引用文献 Crystal Structure of TTHA0252 from Thermus thermophilus HB8 complexed with UMP To be Published
5AJ3	Structure of the small subunit of the mammalian mitoribosome 分子名称: GUANOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, MITORIBOSOMAL 12S RRNA, ... 著者 Greber, B.J, Bieri, P, Leibundgut, M, Leitner, A, Aebersold, R, Boehringer, D, Ban, N. 登録日 2015-02-20 公開日 2015-04-22 最終更新日 2019-12-18 実験手法 ELECTRON MICROSCOPY (3.6 Å) 主引用文献 Ribosome. The complete structure of the 55S mammalian mitochondrial ribosome. Science, 348, 2015
4Z3S	Crystal structure of the Thermus thermophilus 70S ribosome in complex with antibiotic A201A, mRNA and three tRNAs in the A, P and E sites at 2.65A resolution 分子名称: 16S Ribosomal RNA, 23S Ribosomal RNA, 3'-deoxy-3'-{[(2E)-3-(4-{[(4Z)-6-O-(6-deoxy-3,4-di-O-methyl-alpha-D-mannopyranosyl)-5-O-methyl-alpha-D-threo-hex-4-enofuranosyl]oxy}phenyl)-2-methylprop-2-enoyl]amino}-N,N-dimethyladenosine, ... 著者 Polikanov, Y.S, Starosta, A.L, Juette, M.F, Altman, R.B, Terry, D.S, Lu, W, Burnett, B.J, Dinos, G, Reynolds, K, Blanchard, S.C, Steitz, T.A, Wilson, D.N. 登録日 2015-03-31 公開日 2015-06-03 最終更新日 2023-11-15 実験手法 X-RAY DIFFRACTION (2.65 Å) 主引用文献 Distinct tRNA Accommodation Intermediates Observed on the Ribosome with the Antibiotics Hygromycin A and A201A. Mol.Cell, 58, 2015
4ZSN	70S-wild-type HigB toxin complex bound to a AAA lysine codon 分子名称: 16S rRNA, 23S rRNA, 30S ribosomal protein S10, ... 著者 Schureck, M.A, Dunham, C.M. 登録日 2015-05-13 公開日 2016-09-07 最終更新日 2024-03-06 実験手法 X-RAY DIFFRACTION (3.6 Å) 主引用文献 Mechanism of endonuclease cleavage by the HigB toxin. Nucleic Acids Res., 44, 2016
5AJ4	Structure of the 55S mammalian mitoribosome. 分子名称: 28S RIBOSOMAL PROTEIN S18B, MITOCHONDRIAL, GUANOSINE-5'-DIPHOSPHATE, ... 著者 Greber, B.J, Bieri, P, Leibundgut, M, Leitner, A, Aebersold, R, Boehringer, D, Ban, N. 登録日 2015-02-20 公開日 2015-04-22 最終更新日 2019-12-18 実験手法 ELECTRON MICROSCOPY (3.8 Å) 主引用文献 The complete structure of the 55S mammalian mitochondrial ribosome. Science, 348, 2015
3IAP	E. coli (lacZ) beta-galactosidase (E416Q) 分子名称: 2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Beta-galactosidase, DIMETHYL SULFOXIDE, ... 著者 Lo, S, Dugdale, M.L, Jeerh, N, Ku, T, Roth, N.J, Huber, R.E. 登録日 2009-07-14 公開日 2009-12-29 最終更新日 2023-09-06 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Studies of Glu-416 variants of beta-galactosidase (E. coli) show that the active site Mg(2+) is not important for structure and indicate that the main role of Mg (2+) is to mediate optimization of active site chemistry Protein J., 29, 2010
4ZY1	X-ray crystal structure of PfA-M17 in complex with hydroxamic acid-based inhibitor 10r 分子名称: CARBONATE ION, GLYCEROL, N-{(1R)-2-(hydroxyamino)-1-[4-(1-methyl-1H-pyrazol-4-yl)phenyl]-2-oxoethyl}-2,2-dimethylpropanamide, ... 著者 Drinkwater, N, McGowan, S. 登録日 2015-05-21 公開日 2016-03-30 最終更新日 2023-09-27 実験手法 X-RAY DIFFRACTION (2.5 Å) 主引用文献 Potent dual inhibitors of Plasmodium falciparum M1 and M17 aminopeptidases through optimization of S1 pocket interactions. Eur.J.Med.Chem., 110, 2016
5A2Q	Structure of the HCV IRES bound to the human ribosome 分子名称: 18S RRNA, HCV IRES, MAGNESIUM ION, ... 著者 Quade, N, Leiundgut, M, Boehringer, D, Heuvel, J.v.d, Ban, N. 登録日 2015-05-21 公開日 2015-07-15 最終更新日 2019-12-18 実験手法 ELECTRON MICROSCOPY (3.9 Å) 主引用文献 Cryo-Em Structure of Hepatitis C Virus Ires Bound to the Human Ribosome at 3.9 Angstrom Resolution Nat.Commun., 6, 2015
4ZX8	X-ray crystal structure of PfA-M17 in complex with hydroxamic acid-based inhibitor 9b 分子名称: CARBONATE ION, DIMETHYL SULFOXIDE, GLYCEROL, ... 著者 Drinkwater, N, McGowan, S. 登録日 2015-05-20 公開日 2016-03-30 最終更新日 2023-09-27 実験手法 X-RAY DIFFRACTION (2.7 Å) 主引用文献 Potent dual inhibitors of Plasmodium falciparum M1 and M17 aminopeptidases through optimization of S1 pocket interactions. Eur.J.Med.Chem., 110, 2016
1UWA	L290F mutant rubisco from chlamydomonas 分子名称: 1,2-ETHANEDIOL, 2-CARBOXYARABINITOL-1,5-DIPHOSPHATE, MAGNESIUM ION, ... 著者 Karkehabadi, S, Taylor, T.C, Spreitzer, R.J, Andersson, I. 登録日 2004-02-03 公開日 2005-01-12 最終更新日 2023-12-13 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 Altered Intersubunit Interactions in Crystal Structures of Catalytically Compromised Ribulose-1,5-Bisphosphate Carboxylase/Oxygenase Biochemistry, 44, 2005
3FBY	The crystal structure of the signature domain of cartilage oligomeric matrix protein. 分子名称: CALCIUM ION, Cartilage oligomeric matrix protein, SULFATE ION, ... 著者 Tan, K, Lawler, J. 登録日 2008-11-20 公開日 2009-06-23 最終更新日 2023-09-06 実験手法 X-RAY DIFFRACTION (3.15 Å) 主引用文献 The crystal structure of the signature domain of cartilage oligomeric matrix protein: implications for collagen, glycosaminoglycan and integrin binding. Faseb J., 23, 2009
1W2Z	PSAO and Xenon 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, AMINE OXIDASE, COPPER CONTAINING, ... 著者 Duff, A.P, Trambaiolo, D.M, Cohen, A.E, Ellis, P.J, Juda, G.A, Shepard, E.M, Langley, D.B, Dooley, D.M, Freeman, H.C, Guss, J.M. 登録日 2004-07-11 公開日 2004-11-17 最終更新日 2023-12-13 実験手法 X-RAY DIFFRACTION (2.24 Å) 主引用文献 Using Xenon as a Probe for Dioxygen-Binding Sites in Copper Amine Oxidases. J.Mol.Biol., 344, 2004
4ZYQ	X-ray crystal structure of PfA-M17 in complex with hydroxamic acid-based inhibitor 10s 分子名称: CARBONATE ION, N-{(1R)-2-(hydroxyamino)-1-[3'-(N'-hydroxycarbamimidoyl)biphenyl-4-yl]-2-oxoethyl}-2,2-dimethylpropanamide, PENTAETHYLENE GLYCOL, ... 著者 Drinkwater, N, McGowan, S. 登録日 2015-05-22 公開日 2016-03-30 最終更新日 2023-09-27 実験手法 X-RAY DIFFRACTION (2.6 Å) 主引用文献 Potent dual inhibitors of Plasmodium falciparum M1 and M17 aminopeptidases through optimization of S1 pocket interactions. Eur.J.Med.Chem., 110, 2016
1VQO	The structure of CCPMN bound to the large ribosomal subunit haloarcula marismortui 分子名称: 23S ribosomal rna, 5'-R(*CP*CP*(PPU))-3', 50S RIBOSOMAL PROTEIN L10E, ... 著者 Schmeing, T.M, Steitz, T.A. 登録日 2004-12-16 公開日 2005-11-29 最終更新日 2023-08-23 実験手法 X-RAY DIFFRACTION (2.2 Å) 主引用文献 Structural Insights into the Roles of Water and the 2' Hydroxyl of the P Site tRNA in the Peptidyl Transferase Reaction. Mol.Cell, 20, 2005
4ZY0	X-ray crystal structure of PfA-M17 in complex with hydroxamic acid-based inhibitor 10q 分子名称: CARBONATE ION, GLYCEROL, N-{(1R)-2-(hydroxyamino)-2-oxo-1-[4-(thiophen-3-yl)phenyl]ethyl}-2,2-dimethylpropanamide, ... 著者 Drinkwater, N, McGowan, S. 登録日 2015-05-21 公開日 2016-03-30 最終更新日 2023-09-27 実験手法 X-RAY DIFFRACTION (2.2 Å) 主引用文献 Potent dual inhibitors of Plasmodium falciparum M1 and M17 aminopeptidases through optimization of S1 pocket interactions. Eur.J.Med.Chem., 110, 2016
1VQ6	The structure of c-hpmn and CCA-PHE-CAP-BIO bound to the large ribosomal subunit of haloarcula marismortui 分子名称: 23S ribosomal rna, 5'-R(*CP*(5AA)*(HFA))-3', 5'-R(*CP*CP*AP*(PHE)*(ACA)*(BTN))-3', ... 著者 Schmeing, T.M, Steitz, T.A. 登録日 2004-12-16 公開日 2005-11-29 最終更新日 2023-11-15 実験手法 X-RAY DIFFRACTION (2.7 Å) 主引用文献 An induced-fit mechanism to promote peptide bond formation and exclude hydrolysis of peptidyl-tRNA. Nature, 438, 2005

<26272829303132333435363738394041>