PDB: 1507 件ウェブページステータス検索Chemie searchBIRD

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5ZQ5	SidE-Ubi 分子名称: SidE, Ubiquitin 著者 Wang, Y, Gao, A, Gao, P. 登録日 2018-04-17 公開日 2018-05-23 最終更新日 2018-05-30 実験手法 X-RAY DIFFRACTION (2.487 Å) 主引用文献 Structural Insights into Non-canonical Ubiquitination Catalyzed by SidE. Cell, 173, 2018
5ZBI	Crystal structure of asparaginyl endopeptidases from Viola Canadensis 分子名称: Peptide asparaginyl ligase, SODIUM ION 著者 Wong, Y.H, Lescar, J. 登録日 2018-02-12 公開日 2018-05-09 最終更新日 2023-11-22 実験手法 X-RAY DIFFRACTION (2.09 Å) 主引用文献 Crystal structure of Peptide asparaginyl ligase from Viola canadensis To Be Published
5ZQ7	SidE-Ubi-NAD 分子名称: ADENOSINE MONOPHOSPHATE, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, SidE, ... 著者 Wang, Y, Gao, A, Gao, P. 登録日 2018-04-17 公開日 2018-05-23 最終更新日 2023-11-22 実験手法 X-RAY DIFFRACTION (2.847 Å) 主引用文献 Structural Insights into Non-canonical Ubiquitination Catalyzed by SidE. Cell, 173, 2018
2LVO	Structure of the gp78CUE domain bound to monubiquitin 分子名称: E3 ubiquitin-protein ligase AMFR, Ubiquitin 著者 Liu, S, Chen, Y, Huang, T, Tarasov, S.G, King, A, Li, J, Weissman, A.M, Byrd, R.A, Das, R. 登録日 2012-07-09 公開日 2012-11-21 最終更新日 2024-05-15 実験手法 SOLUTION NMR 主引用文献 Promiscuous Interactions of gp78 E3 Ligase CUE Domain with Polyubiquitin Chains. Structure, 20, 2012
2JZ3	SOCS box elonginBC ternary complex 分子名称: Suppressor of cytokine signaling 3, Transcription elongation factor B polypeptide 1, Transcription elongation factor B polypeptide 2 著者 Babon, J.J, Sabo, J, Soetopo, A, Yao, S, Bailey, M.F, Zhang, J, Nicola, N.A, Norton, R.S. 登録日 2007-12-27 公開日 2008-09-23 最終更新日 2024-05-01 実験手法 SOLUTION NMR 主引用文献 The SOCS box domain of SOCS3: structure and interaction with the elonginBC-cullin5 ubiquitin ligase J.Mol.Biol., 381, 2008
2JRI	Solution structure of the Josephin domain of Ataxin-3 in complex with ubiquitin molecule. 分子名称: Ataxin-3, UBC protein 著者 Nicastro, G, Masino, L, Esposito, V, Menon, R, Pastore, A. 登録日 2007-06-27 公開日 2008-07-01 最終更新日 2024-05-29 実験手法 SOLUTION NMR 主引用文献 Understanding the plasticity of the ubiquitin-protein recognition code: the josephin domain of ataxin-3 is a diubiquitin binding motif To be Published
2MA9	HIV-1 Vif SOCS-box and Elongin BC solution structure 分子名称: Transcription elongation factor B polypeptide 1, Transcription elongation factor B polypeptide 2, Virion infectivity factor 著者 Lu, Z, Bergeron, J.R, Atkinson, R.A, Schaller, T, Veselkov, D.A, Oregioni, A, Yang, Y, Matthews, S.J, Malim, M.H, Sanderson, M.R. 登録日 2013-07-01 公開日 2013-12-11 最終更新日 2024-05-01 実験手法 SOLUTION NMR 主引用文献 Insight into the HIV-1 Vif SOCS-box-ElonginBC interaction. OPEN BIOLOGY, 3, 2013
2LXC	Solution structure of the complex between the Sgt2 homodimerization domain and the Get5 UBL domain 分子名称: Small glutamine-rich tetratricopeptide repeat-containing protein 2, Ubiquitin-like protein MDY2 著者 Chartron, J.W, Vandervelde, D.G, Clemons Jr, W.M. 登録日 2012-08-19 公開日 2012-11-21 最終更新日 2024-05-15 実験手法 SOLUTION NMR 主引用文献 Structures of the Sgt2/SGTA Dimerization Domain with the Get5/UBL4A UBL Domain Reveal an Interaction that Forms a Conserved Dynamic Interface. Cell Rep, 2, 2012
2LVP	gp78CUE domain bound to the distal ubiquitin of K48-linked diubiquitin 分子名称: E3 ubiquitin-protein ligase AMFR, Ubiquitin 著者 Liu, S, Chen, Y, Huang, T, Tarasov, S.G, King, A, Li, J, Weissman, A.M, Byrd, R.A, Das, R. 登録日 2012-07-09 公開日 2012-11-21 最終更新日 2024-05-15 実験手法 SOLUTION NMR 主引用文献 Promiscuous Interactions of gp78 E3 Ligase CUE Domain with Polyubiquitin Chains. Structure, 20, 2012
2MBB	Solution Structure of the human Polymerase iota UBM1-Ubiquitin Complex 分子名称: Immunoglobulin G-binding protein G/DNA polymerase iota fusion protein, Polyubiquitin-B 著者 Wang, S, Zhou, P. 登録日 2013-07-29 公開日 2014-06-04 最終更新日 2024-05-15 実験手法 SOLUTION NMR 主引用文献 Sparsely-sampled, high-resolution 4-D omit spectra for detection and assignment of intermolecular NOEs of protein complexes. J.Biomol.Nmr, 59, 2014
2MBH	NMR structure of EKLF(22-40)/Ubiquitin Complex 分子名称: Krueppel-like factor 1, Ubiquitin 著者 Raiola, L, Omichinski, J.G. 登録日 2013-07-31 公開日 2013-10-09 最終更新日 2024-05-15 実験手法 SOLUTION NMR 主引用文献 Structural Characterization of a Noncovalent Complex between Ubiquitin and the Transactivation Domain of the Erythroid-Specific Factor EKLF. Structure, 21, 2013
2LVQ	gp78CUE domain bound to the proximal ubiquitin of K48-linked diubiquitin 分子名称: E3 ubiquitin-protein ligase AMFR, Ubiquitin 著者 Liu, S, Chen, Y, Huang, T, Tarasov, S.G, King, A, Li, J, Weissman, A.M, Byrd, R.A, Das, R. 登録日 2012-07-09 公開日 2012-11-21 最終更新日 2024-05-15 実験手法 SOLUTION NMR 主引用文献 Promiscuous Interactions of gp78 E3 Ligase CUE Domain with Polyubiquitin Chains. Structure, 20, 2012
2MCN	Distinct ubiquitin binding modes exhibited by SH3 domains: molecular determinants and functional implications 分子名称: CD2-associated protein, Ubiquitin 著者 Ortega-Roldan, J, Salmon, L, Azuaga, A, Blackledge, M, Van Nuland, N. 登録日 2013-08-22 公開日 2014-02-05 最終更新日 2024-05-15 実験手法 SOLUTION NMR 主引用文献 Distinct ubiquitin binding modes exhibited by SH3 domains: molecular determinants and functional implications. Plos One, 8, 2013
2N3W	Solution structure of the Rpn1 T1 site with K48-linked diubiquitin in the contracted binding mode 分子名称: 26S proteasome regulatory subunit RPN1, Ubiquitin-60S ribosomal protein L40 著者 Chen, X, Walters, K.J. 登録日 2015-06-10 公開日 2016-02-24 最終更新日 2023-06-14 実験手法 SOLUTION NMR 主引用文献 Rpn1 provides adjacent receptor sites for substrate binding and deubiquitination by the proteasome. Science, 351, 2016
2N9P	Solution structure of RNF126 N-terminal zinc finger domain in complex with BAG6 Ubiquitin-like domain 分子名称: E3 ubiquitin-protein ligase RNF126, Large proline-rich protein BAG6, ZINC ION 著者 Martinez-Lumbreras, S, Krysztofinska, E.M, Thapaliya, A, Isaacson, R.L. 登録日 2015-12-01 公開日 2016-05-25 最終更新日 2024-05-15 実験手法 SOLUTION NMR 主引用文献 Structural and functional insights into the E3 ligase, RNF126. Sci Rep, 6, 2016
2N3U	Solution structure of the Rpn1 T1 site engaging two monoubiquitin molecules 分子名称: 26S proteasome regulatory subunit RPN1, Ubiquitin-60S ribosomal protein L40 著者 Chen, X, Walters, K.J. 登録日 2015-06-10 公開日 2016-02-24 最終更新日 2024-05-15 実験手法 SOLUTION NMR 主引用文献 Rpn1 provides adjacent receptor sites for substrate binding and deubiquitination by the proteasome. Science, 351, 2016
2N3V	Solution structure of the Rpn1 T1 site with K48-linked diubiquitin in the extended binding mode 分子名称: 26S proteasome regulatory subunit RPN1, Ubiquitin-60S ribosomal protein L40 著者 Chen, X, Walters, K.J. 登録日 2015-06-10 公開日 2016-02-24 最終更新日 2023-06-14 実験手法 SOLUTION NMR 主引用文献 Rpn1 provides adjacent receptor sites for substrate binding and deubiquitination by the proteasome. Science, 351, 2016
2K8C	Solution structure of PLAA family ubiquitin binding domain (PFUC) trans isomer in complex with ubiquitin 分子名称: Phospholipase A-2-activating protein, Ubiquitin 著者 Fu, Q.S, Zhou, C.J, Gao, H.C, Lin, D.H, Hu, H.Y. 登録日 2008-09-04 公開日 2009-05-05 最終更新日 2024-05-22 実験手法 SOLUTION NMR 主引用文献 Structural Basis for Ubiquitin Recognition by a Novel Domain from Human Phospholipase A2-activating Protein. J.Biol.Chem., 284, 2009
2K6D	CIN85 Sh3-C domain in complex with ubiquitin 分子名称: SH3 domain-containing kinase-binding protein 1, Ubiquitin 著者 Forman-Kay, J, Bezsonova, I. 登録日 2008-07-07 公開日 2008-08-19 最終更新日 2024-05-01 実験手法 SOLUTION NMR 主引用文献 Interactions between the three CIN85 SH3 domains and ubiquitin: implications for CIN85 ubiquitination. Biochemistry, 47, 2008
2KTF	Solution NMR structure of human polymerase iota UBM2 in complex with ubiquitin 分子名称: DNA polymerase iota, Ubiquitin 著者 Cui, G, Benirschke, R, Mer, G. 登録日 2010-02-01 公開日 2010-11-03 最終更新日 2024-05-01 実験手法 SOLUTION NMR 主引用文献 Structural Basis of Ubiquitin Recognition by Translesion Synthesis DNA Polymerase iota. Biochemistry, 49, 2010
2KDF	NMR structure of minor S5a (196-306):K48 linked diubiquitin species 分子名称: 26S proteasome non-ATPase regulatory subunit 4, Ubiquitin 著者 Zhang, N, Wang, Q, Ehlinger, A, Randles, L, Lary, J.W, Kang, Y, Haririnia, A, Cole, J.L, Fushman, D, Walters, K.J. 登録日 2009-01-06 公開日 2009-09-01 最終更新日 2022-03-16 実験手法 SOLUTION NMR 主引用文献 Structure of the s5a:k48-linked diubiquitin complex and its interactions with rpn13. Mol.Cell, 35, 2009
2K8B	Solution structure of PLAA family ubiquitin binding domain (PFUC) cis isomer in complex with ubiquitin 分子名称: Phospholipase A-2-activating protein, Ubiquitin 著者 Fu, Q.S, Zhou, C.J, Gao, H.C, Lin, D.H, Hu, H.Y. 登録日 2008-09-04 公開日 2009-05-05 最終更新日 2024-05-22 実験手法 SOLUTION NMR 主引用文献 Structural Basis for Ubiquitin Recognition by a Novel Domain from Human Phospholipase A2-activating Protein. J.Biol.Chem., 284, 2009
2IBI	Covalent Ubiquitin-USP2 Complex 分子名称: ETHANAMINE, Ubiquitin, Ubiquitin carboxyl-terminal hydrolase 2, ... 著者 Walker, J.R, Avvakumov, G.V, Bernstein, G, Xue, S, Finerty Jr, P.J, MacKenzie, F, Weigelt, J, Sundstrom, M, Arrowsmith, C.H, Edwards, A.M, Bochkarev, A, Dhe-Paganon, S, Structural Genomics Consortium (SGC) 登録日 2006-09-11 公開日 2006-10-24 最終更新日 2023-08-30 実験手法 X-RAY DIFFRACTION (2.2 Å) 主引用文献 Covalent Ubiquitin-USP2 Complex To be Published
2KDE	NMR structure of major S5a (196-306):K48 linked diubiquitin species 分子名称: 26S proteasome non-ATPase regulatory subunit 4, Ubiquitin 著者 Zhang, N, Wang, Q, Ehlinger, A, Randles, L, Lary, J.W, Kang, Y, Haririnia, A, Cole, J.L, Fushman, D, Walters, K.J. 登録日 2009-01-06 公開日 2009-09-01 最終更新日 2022-03-16 実験手法 SOLUTION NMR 主引用文献 Structure of the s5a:k48-linked diubiquitin complex and its interactions with rpn13. Mol.Cell, 35, 2009
2KHW	Solution Structure of the human Polymerase iota UBM2-Ubiquitin Complex 分子名称: Immunoglobulin G-binding protein G, DNA polymerase iota, Ubiquitin 著者 Bomar, M.G, D'Souza, S, Bienko, M, Dikic, I, Walker, G. 登録日 2009-04-13 公開日 2010-02-23 最終更新日 2024-05-22 実験手法 SOLUTION NMR 主引用文献 Solution Structure of the human Polymerase iota UBM2-Ubiquitin Complex To be Published

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