PDB: 3246 件ウェブページステータス検索Chemie searchBIRD

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2VW5	Structure Of The Hsp90 Inhibitor 7-O-carbamoylpremacbecin Bound To The N- Terminus Of Yeast Hsp90 分子名称: (4E,8S,9R,10E,12S,13R,14S,16R)-13,20-dihydroxy-14-methoxy-4,8,10,12,16-pentamethyl-3-oxo-2-azabicyclo[16.3.1]docosa-1(22),4,10,18,20-pentaen-9-yl carbamate, ATP-DEPENDENT MOLECULAR CHAPERONE HSP82, SULFATE ION 著者 Roe, S.M, Prodromou, C, Pearl, L.H. 登録日 2008-06-16 公開日 2008-09-02 最終更新日 2023-12-13 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 Optimizing Natural Products by Biosynthetic Engineering: Discovery of Nonquinone Hsp90 Inhibitors. J.Med.Chem., 51, 2008
3UB8	Periplasmic portion of the Helicobacter pylori chemoreceptor TlpB with formamide bound 分子名称: FORMAMIDE, GLYCEROL, SULFATE ION, ... 著者 Henderson, J.N, Sweeney, E.G, Goers, J, Wreden, C, Hicks, K.G, Parthasarathy, R, Guillemin, K.J, Remington, S.J. 登録日 2011-10-23 公開日 2012-06-27 最終更新日 2024-02-28 実験手法 X-RAY DIFFRACTION (1.42 Å) 主引用文献 Structure and proposed mechanism for the pH-sensing Helicobacter pylori chemoreceptor TlpB. Structure, 20, 2012
3TIQ	Crystal structure of Staphylococcus aureus SasG G51-E-G52 module 分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, MAGNESIUM ION, Surface protein G 著者 Gruszka, D.T, Wojdyla, J.A, Turkenburg, J.P, Potts, J.R. 登録日 2011-08-21 公開日 2012-04-18 最終更新日 2023-09-13 実験手法 X-RAY DIFFRACTION (1.8739 Å) 主引用文献 Staphylococcal biofilm-forming protein has a contiguous rod-like structure. Proc.Natl.Acad.Sci.USA, 109, 2012
3UB9	Periplasmic portion of the Helicobacter pylori chemoreceptor TlpB with hydroxyurea bound 分子名称: GLYCEROL, N-HYDROXYUREA, SULFATE ION, ... 著者 Henderson, J.N, Sweeney, E.G, Goers, J, Wreden, C, Hicks, K.G, Parthasarathy, R, Guillemin, K.J, Remington, S.J. 登録日 2011-10-23 公開日 2012-06-27 最終更新日 2024-02-28 実験手法 X-RAY DIFFRACTION (1.42 Å) 主引用文献 Structure and proposed mechanism for the pH-sensing Helicobacter pylori chemoreceptor TlpB. Structure, 20, 2012
3T0T	Crystal structure of S. aureus Pyruvate Kinase 分子名称: N'-[(1E)-1-(1H-benzimidazol-2-yl)ethylidene]-5-bromo-2-hydroxybenzohydrazide, PHOSPHATE ION, Pyruvate kinase 著者 Worrall, L.J, Vuckovic, M, Strynadka, N.C.J. 登録日 2011-07-20 公開日 2012-06-06 最終更新日 2024-02-28 実験手法 X-RAY DIFFRACTION (3.1 Å) 主引用文献 Cheminformatics-driven discovery of selective, nanomolar inhibitors for staphylococcal pyruvate kinase. Acs Chem.Biol., 7, 2012
2LDI	NMR solution structure of ZiaAN sub mutant 分子名称: Zinc-transporting ATPase 著者 Banci, L, Bertini, I, Felli, I.C, Pavelkova, A. 登録日 2011-05-26 公開日 2011-11-30 最終更新日 2024-05-15 実験手法 SOLUTION NMR 主引用文献 Cyanobacterial metallochaperone inhibits deleterious side reactions of copper. Proc.Natl.Acad.Sci.USA, 109, 2012
5V1L	Structure of S-GNA dodecamer 分子名称: RNA (5'-R(*CP*GP*CP*GP*AP*AP*UP*(ZTH)P*AP*GP*CP*G)-3'), SPERMINE, STRONTIUM ION 著者 Pallan, P.S, Egli, M. 登録日 2017-03-02 公開日 2017-06-14 最終更新日 2024-05-22 実験手法 X-RAY DIFFRACTION (1.2 Å) 主引用文献 Chirality Dependent Potency Enhancement and Structural Impact of Glycol Nucleic Acid Modification on siRNA. J. Am. Chem. Soc., 139, 2017
5V1K	Structure of R-GNA dodecamer 分子名称: RNA (5'-R(*CP*GP*CP*GP*AP*AP*(5BU)P*(8RJ)P*AP*GP*CP*G)-3') 著者 Pallan, P.S, Egli, M. 登録日 2017-03-02 公開日 2017-06-21 最終更新日 2024-05-22 実験手法 X-RAY DIFFRACTION (1.18 Å) 主引用文献 Chirality Dependent Potency Enhancement and Structural Impact of Glycol Nucleic Acid Modification on siRNA. J. Am. Chem. Soc., 2017
3V1K	Crystal Structure of the H265Q mutant of a C-C hydrolase, BphD from Burkholderia xenovorans LB400. 分子名称: 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase, MALONIC ACID 著者 Ghosh, S, Bolin, J.T. 登録日 2011-12-09 公開日 2012-03-21 最終更新日 2024-02-28 実験手法 X-RAY DIFFRACTION (2.13 Å) 主引用文献 Identification of an Acyl-Enzyme Intermediate in a meta-Cleavage Product Hydrolase Reveals the Versatility of the Catalytic Triad. J.Am.Chem.Soc., 134, 2012
3V3D	Crystal Structure of an eYFP single mutant 分子名称: SULFATE ION, Yellow fluorescent protein 著者 Ngan, N.B, Van Hecke, K, Van Meervelt, L. 登録日 2011-12-13 公開日 2012-12-26 最終更新日 2024-11-06 実験手法 X-RAY DIFFRACTION (1.95 Å) 主引用文献 Improving the second-order nonlinear optical response of fluorescent proteins: the symmetry argument. J.Am.Chem.Soc., 135, 2013
3V1N	Crystal Structure of the H265Q mutant of a C-C hydrolase, BphD from Burkholderia xenovorans LB400, after exposure to its substrate HOPDA 分子名称: (3E)-2,6-DIOXO-6-PHENYLHEX-3-ENOATE, 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase, BENZOIC ACID, ... 著者 Ghosh, S, Bolin, J.T. 登録日 2011-12-09 公開日 2012-03-21 最終更新日 2025-03-26 実験手法 X-RAY DIFFRACTION (1.59 Å) 主引用文献 Identification of an Acyl-Enzyme Intermediate in a meta-Cleavage Product Hydrolase Reveals the Versatility of the Catalytic Triad. J.Am.Chem.Soc., 134, 2012
3V1L	Crystal Structure of the S112A/H265Q mutant of a C-C hydrolase, BphD from Burkholderia xenovorans LB400 分子名称: 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase, MALONIC ACID 著者 Ghosh, S, Bolin, J.T. 登録日 2011-12-09 公開日 2012-03-21 最終更新日 2024-02-28 実験手法 X-RAY DIFFRACTION (2.11 Å) 主引用文献 Identification of an Acyl-Enzyme Intermediate in a meta-Cleavage Product Hydrolase Reveals the Versatility of the Catalytic Triad. J.Am.Chem.Soc., 134, 2012
5VR4	RNA octamer containing 2'-F-4'-OMe U. 分子名称: COBALT TETRAAMMINE ION, RNA (5'-R(*CP*GP*AP*AP*(UMO)P*UP*CP*G)-3') 著者 Harp, J.M, Egli, M. 登録日 2017-05-10 公開日 2017-10-04 最終更新日 2023-10-04 実験手法 X-RAY DIFFRACTION (1.5 Å) 主引用文献 4'-C-Methoxy-2'-deoxy-2'-fluoro Modified Ribonucleotides Improve Metabolic Stability and Elicit Efficient RNAi-Mediated Gene Silencing. J. Am. Chem. Soc., 139, 2017
6ZP5	SARS-CoV-2 spike in prefusion state (flexibility analysis, 1-up closed conformation) 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, DIMETHYL SULFOXIDE, ... 著者 Martinez, M, Marabini, R, Carazo, J.M. 登録日 2020-07-08 公開日 2020-07-29 最終更新日 2024-10-23 実験手法 ELECTRON MICROSCOPY (3.1 Å) 主引用文献 Continuous flexibility analysis of SARS-CoV-2 spike prefusion structures. Iucrj, 7, 2020
2MH8	GA-79-MBP cs-rosetta structures 分子名称: GA-79-MBP, maltose binding protein 著者 He, Y, Chen, Y, Porter, L, Bryan, P, Orban, J. 登録日 2013-11-19 公開日 2015-04-08 最終更新日 2024-05-01 実験手法 SOLUTION NMR 主引用文献 Subdomain interactions foster the design of two protein pairs with 80% sequence identity but different folds. Biophys.J., 108, 2015
5V2H	RNA octamer containing glycol nucleic acid, SgnT 分子名称: COBALT HEXAMMINE(III), MAGNESIUM ION, RNA (5'-R(*(CBV)P*GP*AP*AP*(ZTH)P*UP*CP*G)-3') 著者 Harp, J.M, Egli, M. 登録日 2017-03-04 公開日 2017-06-14 最終更新日 2024-05-22 実験手法 X-RAY DIFFRACTION (1.080013 Å) 主引用文献 Chirality Dependent Potency Enhancement and Structural Impact of Glycol Nucleic Acid Modification on siRNA. J. Am. Chem. Soc., 139, 2017
3V1M	Crystal Structure of the S112A/H265Q mutant of a C-C hydrolase, BphD from Burkholderia xenovorans LB400, after exposure to its substrate HOPDA 分子名称: (3E)-2,6-DIOXO-6-PHENYLHEX-3-ENOATE, 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase, MALONATE ION 著者 Ghosh, S, Bolin, J.T. 登録日 2011-12-09 公開日 2012-03-21 最終更新日 2024-02-28 実験手法 X-RAY DIFFRACTION (1.92 Å) 主引用文献 Identification of an Acyl-Enzyme Intermediate in a meta-Cleavage Product Hydrolase Reveals the Versatility of the Catalytic Triad. J.Am.Chem.Soc., 134, 2012
6ZP7	SARS-CoV-2 spike in prefusion state (flexibility analysis, 1-up open conformation) 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, DIMETHYL SULFOXIDE, ... 著者 Martinez, M, Marabini, R, Carazo, J.M. 登録日 2020-07-08 公開日 2020-07-29 最終更新日 2024-11-13 実験手法 ELECTRON MICROSCOPY (3.3 Å) 主引用文献 Continuous flexibility analysis of SARS-CoV-2 spike prefusion structures. Iucrj, 7, 2020
6ZOW	SARS-CoV-2 spike in prefusion state 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, DIMETHYL SULFOXIDE, ... 著者 Martinez, M, Marabini, R, Carazo, J.M. 登録日 2020-07-07 公開日 2020-07-29 最終更新日 2024-10-16 実験手法 ELECTRON MICROSCOPY (3 Å) 主引用文献 Continuous flexibility analysis of SARS-CoV-2 spike prefusion structures. Iucrj, 7, 2020
3TCT	Structure of wild-type TTR in complex with tafamidis 分子名称: 2-(3,5-dichlorophenyl)-1,3-benzoxazole-6-carboxylic acid, Transthyretin 著者 Connelly, S, Kelly, J.W, Wilson, I.A. 登録日 2011-08-09 公開日 2012-05-30 最終更新日 2023-09-13 実験手法 X-RAY DIFFRACTION (1.3 Å) 主引用文献 Tafamidis, a potent and selective transthyretin kinetic stabilizer that inhibits the amyloid cascade. Proc.Natl.Acad.Sci.USA, 109, 2012
5UYR	Crystal structure of the dark-adapted full-length bacteriophytochrome XccBphP mutant D199A from Xanthomonas campestris 分子名称: BILIVERDINE IX ALPHA, Bacteriophytochrome 著者 Otero, L.H, Klinke, S, Goldbaum, F.A, Bonomi, H.R. 登録日 2017-02-24 公開日 2018-02-28 最終更新日 2024-11-13 実験手法 X-RAY DIFFRACTION (3.45 Å) 主引用文献 Pr-favoured variants of the bacteriophytochrome from the plant pathogen Xanthomonas campestris hint on light regulation of virulence-associated mechanisms. Febs J., 288, 2021
2MKX	Solution structure of LysM the peptidoglycan binding domain of autolysin AtlA from Enterococcus faecalis 分子名称: Autolysin 著者 Baxter, N.J, Williamson, M.P. 登録日 2014-02-14 公開日 2014-06-18 最終更新日 2024-05-15 実験手法 SOLUTION NMR 主引用文献 Molecular basis for bacterial peptidoglycan recognition by LysM domains. Nat Commun, 5, 2014
3UB6	Periplasmic portion of the Helicobacter pylori chemoreceptor TlpB with urea bound 分子名称: DI(HYDROXYETHYL)ETHER, GLYCEROL, SULFATE ION, ... 著者 Henderson, J.N, Sweeney, E.G, Goers, J, Wreden, C, Hicks, K.G, Parthasarathy, R, Guillemin, K.J, Remington, S.J. 登録日 2011-10-23 公開日 2012-06-27 最終更新日 2024-02-28 実験手法 X-RAY DIFFRACTION (1.38 Å) 主引用文献 Structure and proposed mechanism for the pH-sensing Helicobacter pylori chemoreceptor TlpB. Structure, 20, 2012
4V1F	Crystal structure of a mycobacterial ATP synthase rotor ring in complex with Bedaquiline 分子名称: Bedaquiline, F0F1 ATP SYNTHASE SUBUNIT C, octyl beta-D-glucopyranoside 著者 Preiss, L, Yildiz, O, Meier, T. 登録日 2014-09-26 公開日 2015-05-20 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (1.697 Å) 主引用文献 Structure of the mycobacterial ATP synthase Fo rotor ring in complex with the anti-TB drug bedaquiline. Sci Adv, 1, 2015
4V1G	Crystal structure of a mycobacterial ATP synthase rotor ring 分子名称: F0F1 ATP SYNTHASE SUBUNIT C, octyl beta-D-glucopyranoside 著者 Preiss, L, Yildiz, O, Meier, T. 登録日 2014-09-26 公開日 2015-05-20 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (1.55 Å) 主引用文献 Structure of the Mycobacterial ATP Synthase Fo Rotor Ring in Complex with the Anti-Tb Drug Bedaquiline. Sci.Adv., 1, 2015

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