Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

5MDV
DownloadVisualize
BU of 5mdv by Molmil
Structure of ArfA and RF2 bound to the 70S ribosome (accommodated state)
分子名称: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ...
著者James, N.R, Brown, A, Gordiyenko, Y, Ramakrishnan, V.
登録日2016-11-13
公開日2016-12-14
最終更新日2024-04-24
実験手法ELECTRON MICROSCOPY (2.97 Å)
主引用文献Translational termination without a stop codon.
Science, 354, 2016
5BZ7
DownloadVisualize
BU of 5bz7 by Molmil
X-ray crystal structure of a continuously hydrogen bonded 14mer DNA lattice.
分子名称: DNA (5'-D(*GP*GP*AP*AP*AP*AP*TP*TP*TP*GP*GP*AP*GP*A)-3'), MAGNESIUM ION
著者Saoji, M, Paukstelis, P.J.
登録日2015-06-11
公開日2015-11-11
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.03 Å)
主引用文献Sequence-dependent structural changes in a self-assembling DNA oligonucleotide.
Acta Crystallogr.,Sect.D, 71, 2015
5FUO
DownloadVisualize
BU of 5fuo by Molmil
Extending the half-life of a Fab fragment through generation of a humanised anti-Human Serum Albumin (HSA) Fv domain: an investigation into the correlation between affinity and serum half-life
分子名称: FAB HEAVY CHAIN, FAB LIGHT CHAIN, SERUM ALBUMIN
著者Adams, R, Ceska, T.
登録日2016-01-28
公開日2016-06-29
最終更新日2024-10-23
実験手法X-RAY DIFFRACTION (3.6 Å)
主引用文献Extending the Half-Life of a Fab Fragment Through Generation of a Humanized Anti-Human Serum Albumin Fv Domain: An Investigation Into the Correlation between Affinity and Serum Half-Life.
Mabs, 8, 2016
5FYQ
DownloadVisualize
BU of 5fyq by Molmil
Sirt2 in complex with a 13-mer trifluoroacetylated Ran peptide
分子名称: NAD-DEPENDENT PROTEIN DEACETYLASE SIRTUIN-2, RAN AA 31-43, SULFATE ION, ...
著者Knyphausen, P, de Boor, S, Scislowski, L, Extra, A, Baldus, L, Schacherl, M, Baumann, U, Neundorf, I, Lammers, M.
登録日2016-03-09
公開日2016-05-25
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Insights Into Lysine-Deacetylation of Natively Folded Substrate Proteins by Sirtuins.
J.Biol.Chem., 291, 2016
2D3D
DownloadVisualize
BU of 2d3d by Molmil
crystal structure of the RNA binding SAM domain of saccharomyces cerevisiae Vts1
分子名称: CALCIUM ION, Vts1 protein
著者Aviv, T, Amborski, A.N, Zhao, X.S, Kwan, J.J, Johnson, P.E, Sicheri, F, Donaldson, L.W.
登録日2005-09-27
公開日2006-02-14
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献The NMR and X-ray Structures of the Saccharomyces cerevisiae Vts1 SAM Domain Define a Surface for the Recognition of RNA Hairpins
J.Mol.Biol., 356, 2006
2D57
DownloadVisualize
BU of 2d57 by Molmil
Double layered 2D crystal structure of AQUAPORIN-4 (AQP4M23) at 3.2 a resolution by electron crystallography
分子名称: Aquaporin-4
著者Hiroaki, Y, Tani, K, Kamegawa, A, Gyobu, N, Nishikawa, K, Suzuki, H, Walz, T, Sasaki, S, Mitsuoka, K, Kimura, K, Mizoguchi, A, Fujiyoshi, Y.
登録日2005-10-29
公開日2006-01-31
最終更新日2023-11-08
実験手法ELECTRON CRYSTALLOGRAPHY (3.2 Å)
主引用文献Implications of the Aquaporin-4 Structure on Array Formation and Cell Adhesion
J.Mol.Biol., 355, 2005
7RM8
DownloadVisualize
BU of 7rm8 by Molmil
Solution NMR structure of PDLIM7 PDZ bound to SNX17 peptide
分子名称: Isoform 4 of PDZ and LIM domain protein 7,Sorting nexin-17 fusion
著者Healy, M.D, Collins, B.M, Mobli, M.
登録日2021-07-26
公開日2022-08-31
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Proteomic identification and structural basis for the interaction between sorting nexin SNX17 and PDLIM family proteins.
Structure, 30, 2022
2D8X
DownloadVisualize
BU of 2d8x by Molmil
Solution structure of the second LIM domain of particularly interesting new Cys-His protein (PINCH)
分子名称: Protein PINCH, ZINC ION
著者Qin, X.R, Hayashi, F, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2005-12-08
公開日2006-06-08
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献Solution structure of the second LIM domain of particularly interesting new Cys-His protein (PINCH)
To be published
6B41
DownloadVisualize
BU of 6b41 by Molmil
Menin bound to M-525
分子名称: Menin, methyl {(1S,2R)-2-[(S)-cyano[1-({1-[4-({1-[4-(dimethylamino)butanoyl]azetidin-3-yl}sulfonyl)phenyl]azetidin-3-yl}methyl)piperidin-4-yl](3-fluorophenyl)methyl]cyclopentyl}carbamate, praseodymium triacetate
著者Stuckey, J.A.
登録日2017-09-25
公開日2018-01-24
最終更新日2024-10-23
実験手法X-RAY DIFFRACTION (2.61 Å)
主引用文献Design of the First-in-Class, Highly Potent Irreversible Inhibitor Targeting the Menin-MLL Protein-Protein Interaction.
Angew. Chem. Int. Ed. Engl., 57, 2018
1STC
DownloadVisualize
BU of 1stc by Molmil
CAMP-DEPENDENT PROTEIN KINASE, ALPHA-CATALYTIC SUBUNIT IN COMPLEX WITH STAUROSPORINE
分子名称: CAMP-DEPENDENT PROTEIN KINASE, PROTEIN KINASE INHIBITOR, STAUROSPORINE
著者Prade, L, Engh, R.A, Girod, A, Kinzel, V, Huber, R, Bossemeyer, D.
登録日1997-10-10
公開日1998-02-25
最終更新日2023-08-09
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Staurosporine-induced conformational changes of cAMP-dependent protein kinase catalytic subunit explain inhibitory potential.
Structure, 5, 1997
1SSK
DownloadVisualize
BU of 1ssk by Molmil
Structure of the N-terminal RNA-binding Domain of the SARS CoV Nucleocapsid Protein
分子名称: Nucleocapsid protein
著者Huang, Q, Yu, L, Petros, A.M, Gunasekera, A, Liu, Z, Xu, N, Hajduk, P, Mack, J, Fesik, S.W, Olejniczak, E.T.
登録日2004-03-24
公開日2004-06-08
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献Structure of the N-Terminal RNA-Binding Domain of the SARS CoV Nucleocapsid Protein.
Biochemistry, 43, 2004
1SSP
DownloadVisualize
BU of 1ssp by Molmil
WILD-TYPE URACIL-DNA GLYCOSYLASE BOUND TO URACIL-CONTAINING DNA
分子名称: 5'-D(*AP*AP*AP*GP*AP*TP*AP*AP*CP*AP*G)-3', 5'-D(*CP*TP*GP*TP*(D1P)P*AP*TP*CP*TP*T)-3', URACIL, ...
著者Parikh, S.S, Mol, C.D, Slupphaug, G, Bharati, S, Krokan, H.E, Tainer, J.A.
登録日1999-04-28
公開日1999-05-06
最終更新日2023-08-02
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Base excision repair initiation revealed by crystal structures and binding kinetics of human uracil-DNA glycosylase with DNA.
EMBO J., 17, 1998
1SVG
DownloadVisualize
BU of 1svg by Molmil
Crystal Structure of Protein Kinase A in Complex with Azepane Derivative 4
分子名称: CAMP-DEPENDENT PROTEIN KINASE INHIBITOR, ALPHA FORM, N-{(3R,4R)-4-[4-(2-FLUORO-6-HYDROXY-3-METHOXY-BENZOYL)-BENZOYLAMINO]-AZEPAN-3-YL}ISONICOTINAMIDE, ...
著者Breitenlechner, C.B, Wegge, T, Berillon, L, Graul, K, Marzenell, K, Friebe, W.-G, Thomas, U, Schumacher, R, Huber, R, Engh, R.A, Masjost, B.
登録日2004-03-29
公開日2005-03-29
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2.02 Å)
主引用文献Structure-based optimization of novel azepane derivatives as PKB inhibitors
J.Med.Chem., 47, 2004
6B1O
DownloadVisualize
BU of 6b1o by Molmil
The structure of DPP4 in complex with Vildagliptin Analog
分子名称: (2S)-2-amino-1-[(1S,3S,5S)-3-(aminomethyl)-2-azabicyclo[3.1.0]hexan-2-yl]-2-[(1r,3R,5S,7S)-3,5-dihydroxytricyclo[3.3.1.1~3,7~]decan-1-yl]ethan-1-one, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Scapin, G.
登録日2017-09-18
公開日2017-09-27
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (1.91 Å)
主引用文献A comparative study of the binding properties, dipeptidyl peptidase-4 (DPP-4) inhibitory activity and glucose-lowering efficacy of the DPP-4 inhibitors alogliptin, linagliptin, saxagliptin, sitagliptin and vildagliptin in mice.
Endocrinol Diabetes Metab, 1, 2018
6B76
DownloadVisualize
BU of 6b76 by Molmil
Crystal Structure of human NAMPT in complex with NVP-LVR596
分子名称: (1S,2S)-N-{4-[(1S)-1-(propanoylamino)ethyl]phenyl}-2-(pyridin-3-yl)cyclopropane-1-carboxamide, Nicotinamide phosphoribosyltransferase, PHOSPHATE ION
著者Weihofen, W.A, Thigale, S.
登録日2017-10-03
公開日2018-10-03
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.44 Å)
主引用文献Identification and structure based design of cellularly active cyclo-propyl carboxamide Nicotinamide phosphoribosyltransferase (NAMPT) inhibitors
To Be Published
5BXW
DownloadVisualize
BU of 5bxw by Molmil
X-ray crystal structure of a continuously hydrogen bonded 14mer DNA lattice.
分子名称: DNA (5'-D(*GP*GP*AP*AP*AP*GP*CP*TP*TP*GP*GP*AP*GP*A)-3'), MAGNESIUM ION
著者Saoji, M, Paukstelis, P.J.
登録日2015-06-09
公開日2015-11-11
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (2.15 Å)
主引用文献Sequence-dependent structural changes in a self-assembling DNA oligonucleotide.
Acta Crystallogr.,Sect.D, 71, 2015
1WNS
DownloadVisualize
BU of 1wns by Molmil
Crystal structure of family B DNA polymerase from hyperthermophilic archaeon pyrococcus kodakaraensis KOD1
分子名称: DNA POLYMERASE
著者Hashimoto, H, Inoue, T, Kai, Y, Fujiwara, S, Takagi, M, Nishioka, M, Imanaka, T.
登録日2004-08-09
公開日2004-08-17
最終更新日2017-08-16
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Crystal Structure of DNA Polymerase from Hyperthermophilic Archaeon Pyrococcus Kodakaraensis Kod1
J.Mol.Biol., 306, 2001
5MHR
DownloadVisualize
BU of 5mhr by Molmil
T3D reovirus sigma1 complexed with 9BG5 Fab fragments
分子名称: 9BG5 Fab heavy chain, 9BG5 Fab light chain,LOC100046793 protein,MAb 110 light chain, Viral attachment protein sigma 1
著者Stehle, T, Dietrich, M.H.
登録日2016-11-25
公開日2017-02-15
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Structural Insights into Reovirus sigma 1 Interactions with Two Neutralizing Antibodies.
J. Virol., 91, 2017
5GTU
DownloadVisualize
BU of 5gtu by Molmil
Structural and mechanistic insights into regulation of the retromer coat by TBC1d5
分子名称: TBC1 domain family member 5, Vacuolar protein sorting-associated protein 29
著者Jia, D, Rosen, M.
登録日2016-08-23
公開日2016-12-07
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Structural and mechanistic insights into regulation of the retromer coat by TBC1d5
Nat Commun, 7, 2016
1WIO
DownloadVisualize
BU of 1wio by Molmil
STRUCTURE OF T-CELL SURFACE GLYCOPROTEIN CD4, TETRAGONAL CRYSTAL FORM
分子名称: T-CELL SURFACE GLYCOPROTEIN CD4
著者Wu, H, Kwong, P.D, Hendrickson, W.A.
登録日1996-12-18
公開日1997-07-07
最終更新日2024-10-23
実験手法X-RAY DIFFRACTION (3.9 Å)
主引用文献Dimeric association and segmental variability in the structure of human CD4.
Nature, 387, 1997
5BZ9
DownloadVisualize
BU of 5bz9 by Molmil
X-ray crystal structure of a continuously hydrogen bonded 14mer DNA lattice.
分子名称: DNA (5'-D(GGAAACGTTGGAGA), MAGNESIUM ION
著者Saoji, M, Paukstelis, P.J.
登録日2015-06-11
公開日2015-11-11
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Sequence-dependent structural changes in a self-assembling DNA oligonucleotide.
Acta Crystallogr.,Sect.D, 71, 2015
5MQF
DownloadVisualize
BU of 5mqf by Molmil
Cryo-EM structure of a human spliceosome activated for step 2 of splicing (C* complex)
分子名称: 116 kDa U5 small nuclear ribonucleoprotein component, ATP-dependent RNA helicase DHX8, Cell division cycle 5-like protein, ...
著者Bertram, K, Hartmuth, K, Kastner, B.
登録日2016-12-20
公開日2017-03-22
最終更新日2018-11-21
実験手法ELECTRON MICROSCOPY (5.9 Å)
主引用文献Cryo-EM structure of a human spliceosome activated for step 2 of splicing.
Nature, 542, 2017
3DIG
DownloadVisualize
BU of 3dig by Molmil
CRYSTAL STRUCTURE OF THE THERMOTOGA MARITIMA LYSINE RIBOSWITCH BOUND TO S-(2-aminoethyl)-L-cysteine
分子名称: ISOPROPYL ALCOHOL, L-THIALYSINE, POTASSIUM ION, ...
著者Serganov, A.A.
登録日2008-06-20
公開日2008-09-16
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Structural insights into amino acid binding and gene control by a lysine riboswitch.
Nature, 455, 2008
5MRU
DownloadVisualize
BU of 5mru by Molmil
TetR(class A) in complex with 5a,6-anhydrotetracycline and magnesium
分子名称: 5A,6-ANHYDROTETRACYCLINE, MAGNESIUM ION, Tetracycline Repressor, ...
著者Hinrichs, W, Palm, G.J.
登録日2016-12-26
公開日2018-01-17
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.55 Å)
主引用文献TetR(class A) in complex with 5a,6-anhydrotetracycline and magnesium
To Be Published
1T1U
DownloadVisualize
BU of 1t1u by Molmil
Structural Insights and Functional Implications of Choline Acetyltransferase
分子名称: Choline O-acetyltransferase
著者Govindasamy, L, Pedersen, B, Lian, W, Kukar, T, Gu, Y, Jin, S, Agbandje-McKenna, M, Wu, D.
登録日2004-04-18
公開日2005-04-12
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (1.55 Å)
主引用文献Structural insights and functional implications of choline acetyltransferase
J.Struct.Biol., 148, 2004

226707

件を2024-10-30に公開中

PDB statisticsPDBj update infoContact PDBjnumon