Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

7UON
DownloadVisualize
BU of 7uon by Molmil
CTX-M-14 Y105W mutant
分子名称: Beta-lactamase, PHOSPHATE ION
著者Judge, A, Hu, L, Sankaran, B, Van Riper, J, Prasad, B.V.V, Palzkill, T.
登録日2022-04-13
公開日2023-01-25
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.35 Å)
主引用文献Mapping the determinants of catalysis and substrate specificity of the antibiotic resistance enzyme CTX-M beta-lactamase.
Commun Biol, 6, 2023
7UIC
DownloadVisualize
BU of 7uic by Molmil
Mediator-PIC Early (Tail A)
分子名称: Mediator of RNA polymerase II transcription subunit 14, Mediator of RNA polymerase II transcription subunit 15, Mediator of RNA polymerase II transcription subunit 16, ...
著者Gorbea Colon, J.J, Chen, S.-F, Tsai, K.L, Murakami, K.
登録日2022-03-29
公開日2023-02-15
最終更新日2024-06-12
実験手法ELECTRON MICROSCOPY (3.7 Å)
主引用文献Structural basis of a transcription pre-initiation complex on a divergent promoter.
Mol.Cell, 83, 2023
7UIK
DownloadVisualize
BU of 7uik by Molmil
Mediator-PIC Early (Tail A + Upstream DNA & Activator)
分子名称: DNA (37-MER), DNA (38-MER), Mediator of RNA polymerase II transcription subunit 14, ...
著者Gorbea Colon, J.J, Chen, S.-F, Tsai, K.L, Murakami, K.
登録日2022-03-29
公開日2023-03-01
最終更新日2024-06-12
実験手法ELECTRON MICROSCOPY (7.7 Å)
主引用文献Structural basis of a transcription pre-initiation complex on a divergent promoter.
Mol.Cell, 83, 2023
2J1M
DownloadVisualize
BU of 2j1m by Molmil
P450 BM3 Heme domain in complex with DMSO
分子名称: CYTOCHROME P450 102, DIMETHYL SULFOXIDE, PROTOPORPHYRIN IX CONTAINING FE, ...
著者Kuper, J, Tuck-Seng, W, Roccatano, D, Wilmanns, M, Schwaneberg, U.
登録日2006-08-14
公開日2007-05-15
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Understanding a Mechanism of Organic Cosolvent Inactivation in Heme Monooxygenase P450 Bm-3.
J.Am.Chem.Soc., 129, 2007
6ET5
DownloadVisualize
BU of 6et5 by Molmil
Reaction centre light harvesting complex 1 from Blc. virids
分子名称: 15-cis-1,2-dihydroneurosporene, BACTERIOCHLOROPHYLL B, BACTERIOPHEOPHYTIN B, ...
著者Qian, P, Siebert, C.A, Canniffe, D.P, Wang, P, Hunter, C.N.
登録日2017-10-25
公開日2018-04-11
最終更新日2019-10-23
実験手法ELECTRON MICROSCOPY (3 Å)
主引用文献Cryo-EM structure of the Blastochloris viridis LH1-RC complex at 2.9 angstrom.
Nature, 556, 2018
7NBA
DownloadVisualize
BU of 7nba by Molmil
Plasmodium falciparum kinesin-5 motor domain bound to AMPPNP, complexed with 14 protofilament microtubule.
分子名称: GUANOSINE-5'-TRIPHOSPHATE, Kinesin motor domain-containing protein,Kinesin motor domain-containing protein, MAGNESIUM ION, ...
著者Cook, A.D, Roberts, A, Atherton, J, Tewari, R, Topf, M, Moores, C.A.
登録日2021-01-25
公開日2021-10-13
最終更新日2024-07-10
実験手法ELECTRON MICROSCOPY (4 Å)
主引用文献Cryo-EM structure of a microtubule-bound parasite kinesin motor and implications for its mechanism and inhibition.
J.Biol.Chem., 297, 2021
7NB8
DownloadVisualize
BU of 7nb8 by Molmil
Plasmodium falciparum kinesin-5 motor domain without nucleotide, complexed with 14 protofilament microtubule.
分子名称: GUANOSINE-5'-TRIPHOSPHATE, Kinesin-5, MAGNESIUM ION, ...
著者Cook, A.D, Roberts, A, Atherton, J, Tewari, R, Topf, M, Moores, C.A.
登録日2021-01-25
公開日2021-10-13
最終更新日2024-07-10
実験手法ELECTRON MICROSCOPY (4.4 Å)
主引用文献Cryo-EM structure of a microtubule-bound parasite kinesin motor and implications for its mechanism and inhibition.
J.Biol.Chem., 297, 2021
7NDT
DownloadVisualize
BU of 7ndt by Molmil
UL40:01 TCR in complex with HLA-E with a non-natural amino acid
分子名称: Beta-2-microglobulin, HLA class I histocompatibility antigen, alpha chain E, ...
著者Pengelly, R.J, Robinson, R.A.
登録日2021-02-02
公開日2022-01-26
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2.999 Å)
主引用文献Structure-guided stabilization of pathogen-derived peptide-HLA-E complexes using non-natural amino acids conserves native TCR recognition.
Eur.J.Immunol., 52, 2022
7NE6
DownloadVisualize
BU of 7ne6 by Molmil
Human TET2 in complex with unfavourable DNA substrate.
分子名称: 1,2-ETHANEDIOL, 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, DNA (5'-D(*AP*CP*AP*GP*GP*(5CM)P*GP*CP*CP*TP*G)-3'), ...
著者Rafalski, D, Bochtler, M.
登録日2021-02-03
公開日2022-03-02
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Pronounced sequence specificity of the TET enzyme catalytic domain guides its cellular function.
Sci Adv, 8, 2022
6G2I
DownloadVisualize
BU of 6g2i by Molmil
Filament of acetyl-CoA carboxylase and BRCT domains of BRCA1 (ACC-BRCT) at 5.9 A resolution
分子名称: Acetyl-CoA carboxylase 1, Breast cancer type 1 susceptibility protein
著者Hunkeler, M, Hagmann, A, Stuttfeld, E, Chami, M, Stahlberg, H, Maier, T.
登録日2018-03-23
公開日2018-06-13
最終更新日2019-12-11
実験手法ELECTRON MICROSCOPY (5.9 Å)
主引用文献Structural basis for regulation of human acetyl-CoA carboxylase.
Nature, 558, 2018
2MQS
DownloadVisualize
BU of 2mqs by Molmil
Transient Collagen Triple Helix Binding to a Key Metalloproteinase in Invasion and Development: Spin Labels to Structure
分子名称: Matrix metalloproteinase-14, THP_L_and_M_chain, THP_T_chain
著者Zhao, Y, Marcink, T, Van Doren, S.R.
登録日2014-06-26
公開日2015-02-11
最終更新日2023-06-14
実験手法SOLUTION NMR
主引用文献Transient collagen triple helix binding to a key metalloproteinase in invasion and development.
Structure, 23, 2015
6FYM
DownloadVisualize
BU of 6fym by Molmil
Human PARP14 (ARTD8), catalytic fragment in complex with inhibitor ITK1
分子名称: 7,8-dimethyl-2-(pyrimidin-2-ylsulfanylmethyl)-3~{H}-quinazolin-4-one, NITRATE ION, Poly [ADP-ribose] polymerase 14
著者Karlberg, T, Thorsell, A.G, Kirby, I.T, Sreenivasan, R, Cohen, M.S, Schuler, H.
登録日2018-03-12
公開日2019-02-20
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.15 Å)
主引用文献A Potent and Selective PARP11 Inhibitor Suggests Coupling between Cellular Localization and Catalytic Activity.
Cell Chem Biol, 25, 2018
6HWV
DownloadVisualize
BU of 6hwv by Molmil
Crystal structure of p38alpha in complex with a photoswitchable 2-Azoimidazol-based Inhibitor (compound 3)
分子名称: 3-(2,5-dimethoxyphenyl)-~{N}-[4-[5-(4-fluorophenyl)-2-[(~{E})-(4-fluorophenyl)diazenyl]-3-methyl-imidazol-4-yl]pyridin-2-yl]propanamide, Mitogen-activated protein kinase 14, octyl beta-D-glucopyranoside
著者Mueller, M.P, Rauh, D.
登録日2018-10-15
公開日2019-04-17
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献2-Azo-, 2-diazocine-thiazols and 2-azo-imidazoles as photoswitchable kinase inhibitors: limitations and pitfalls of the photoswitchable inhibitor approach.
Photochem. Photobiol. Sci., 18, 2019
6FZM
DownloadVisualize
BU of 6fzm by Molmil
Human PARP14 (ARTD8), catalytic fragment in complex with inhibitor ITK6
分子名称: 4-[(8-methyl-4-oxidanylidene-7-prop-1-ynyl-3~{H}-quinazolin-2-yl)methylsulfanyl]benzoic acid, Poly [ADP-ribose] polymerase 14
著者Karlberg, T, Thorsell, A.G, Kirby, I.T, Sreenivasan, R, Cohen, M.S, Schuler, H.
登録日2018-03-15
公開日2019-02-20
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.67 Å)
主引用文献A Potent and Selective PARP11 Inhibitor Suggests Coupling between Cellular Localization and Catalytic Activity.
Cell Chem Biol, 25, 2018
6G0W
DownloadVisualize
BU of 6g0w by Molmil
Human PARP14 (ARTD8), catalytic fragment in complex with inhibitor MCD72
分子名称: 4-[3-[4-(4-fluorophenyl)piperidin-1-yl]carbonylphenoxy]benzamide, Poly [ADP-ribose] polymerase 14
著者Karlberg, T, Thorsell, A.G, Holechek, J, Lease, R, Ferraris, D, Schuler, H.
登録日2018-03-20
公開日2018-05-23
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.34 Å)
主引用文献Design, synthesis and evaluation of potent and selective inhibitors of mono-(ADP-ribosyl)transferases PARP10 and PARP14.
Bioorg. Med. Chem. Lett., 28, 2018
2NWC
DownloadVisualize
BU of 2nwc by Molmil
A 3.02 angstrom crystal structure of wild-type apo GroEL in a monoclinic space group
分子名称: 60 kDa chaperonin
著者Kiser, P.D, Lodowski, D.T, Palczewski, K.
登録日2006-11-14
公開日2007-05-22
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (3.02 Å)
主引用文献Purification, crystallization and structure determination of native GroEL from Escherichia coli lacking bound potassium ions
Acta Crystallogr.,Sect.F, 63, 2007
2KMZ
DownloadVisualize
BU of 2kmz by Molmil
NMR Structure of hFn14
分子名称: Tumor necrosis factor receptor superfamily member 12A
著者Pellegrini, M, Willen, L, Perroud, M, Krushinskie, D, Strauch, K, Cuervo, H, Sun, Y, Day, E.S, Schneider, P, Zheng, T.S.
登録日2009-08-10
公開日2011-06-29
最終更新日2013-05-01
実験手法SOLUTION NMR
主引用文献Structure of the extracellular domains of human and Xenopus Fn14: implications in the evolution of TWEAK and Fn14 interactions.
Febs J., 280, 2013
2NSQ
DownloadVisualize
BU of 2nsq by Molmil
Crystal structure of the C2 domain of the human E3 ubiquitin-protein ligase NEDD4-like protein
分子名称: 1,2-ETHANEDIOL, E3 ubiquitin-protein ligase NEDD4-like protein, GLYCEROL
著者Walker, J.R, Avvakumov, G.V, Xue, S, Butler-Cole, C, Finerty Jr, P.J, Weigelt, J, Sundstrom, M, Arrowsmith, C.H, Edwards, A.M, Bochkarev, A, Dhe-Paganon, S, Structural Genomics Consortium (SGC)
登録日2006-11-06
公開日2006-12-19
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献The C2 domain of the human E3 ubiquitin-protein ligase NEDD4-like protein
To be Published
3O1M
DownloadVisualize
BU of 3o1m by Molmil
Iron-Catalyzed Oxidation Intermediates Captured in A DNA Repair Dioxygenase
分子名称: 2-OXOGLUTARIC ACID, Alpha-ketoglutarate-dependent dioxygenase AlkB, DNA (5'-D(*AP*AP*CP*GP*GP*TP*AP*TP*TP*AP*CP*CP*T)-3'), ...
著者Yi, C, Jia, G, Hou, G, Dai, Q, Zhang, W, Zheng, G, Jian, X, Yang, C.-G, Cui, Q, He, C.
登録日2010-07-21
公開日2010-11-17
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献Iron-catalysed oxidation intermediates captured in a DNA repair dioxygenase.
Nature, 468, 2010
3O1P
DownloadVisualize
BU of 3o1p by Molmil
Iron-Catalyzed Oxidation Intermediates Captured in A DNA Repair Dioxygenase
分子名称: 2-OXOGLUTARIC ACID, Alpha-ketoglutarate-dependent dioxygenase AlkB, DNA (5'-D(*AP*AP*CP*GP*GP*TP*AP*TP*TP*AP*CP*CP*T)-3'), ...
著者Yi, C, Jia, G, Hou, G, Dai, Q, Zhang, W, Zheng, G, Jian, X, Yang, C.-G, Cui, Q, He, C.
登録日2010-07-21
公開日2010-11-17
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (1.51 Å)
主引用文献Iron-catalysed oxidation intermediates captured in a DNA repair dioxygenase.
Nature, 468, 2010
6U3E
DownloadVisualize
BU of 6u3e by Molmil
Best fitting antiparallel model for Volume 1 of truncated dimeric Cytohesin-3 (Grp1; amino acids 14-399)
分子名称: Cytohesin-3, INOSITOL-(1,3,4,5)-TETRAKISPHOSPHATE
著者Das, S, Lambright, D.G.
登録日2019-08-21
公開日2019-09-25
最終更新日2023-11-29
実験手法ELECTRON MICROSCOPY (53 Å)
主引用文献Structural Organization and Dynamics of Homodimeric Cytohesin Family Arf GTPase Exchange Factors in Solution and on Membranes.
Structure, 27, 2019
3OAA
DownloadVisualize
BU of 3oaa by Molmil
Structure of the E.coli F1-ATP synthase inhibited by subunit Epsilon
分子名称: ADENOSINE-5'-DIPHOSPHATE, ATP synthase epsilon chain, ATP synthase gamma chain, ...
著者Cingolani, G, Duncan, T.M.
登録日2010-08-05
公開日2011-05-25
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (3.26 Å)
主引用文献Structural basis for inhibition of bacterial ATP synthase by subunit epsilon of the rotor stalk
To be Published
3OG8
DownloadVisualize
BU of 3og8 by Molmil
Crystal structure of human RIG-I CTD bound to a 14-bp blunt-ended dsRNA
分子名称: Antiviral innate immune response receptor RIG-I, RNA (5'-R(*GP*GP*CP*GP*CP*GP*CP*GP*CP*GP*CP*GP*CP*C)-3'), ZINC ION
著者Li, P.
登録日2010-08-16
公開日2010-11-03
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Crystal structure of RIG-I C-terminal domain bound to blunt-ended double-strand RNA without 5' triphosphate.
Nucleic Acids Res., 39, 2011
4ABL
DownloadVisualize
BU of 4abl by Molmil
HUMAN PARP14 (ARTD8, BAL2) - MACRO DOMAIN 3
分子名称: BROMIDE ION, POLY [ADP-RIBOSE] POLYMERASE 14
著者Karlberg, T, Moche, M, Thorsell, A.G, Arrowsmith, C.H, Bountra, C, Edwards, A.M, Ekblad, T, Weigelt, J, Schuler, H.
登録日2011-12-08
公開日2012-12-19
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (1.15 Å)
主引用文献Recognition of Mono-Adp-Ribosylated Artd10 Substrates by Artd8 Macrodomains
Structure, 21, 2013
4ABE
DownloadVisualize
BU of 4abe by Molmil
Fragments bound to bovine trypsin for the SAMPL challenge
分子名称: (3-PYRAZOL-1-YLPHENYL)METHANAMINE, 1,2-ETHANEDIOL, CALCIUM ION, ...
著者Newman, J, Peat, T.S.
登録日2011-12-08
公開日2012-02-08
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (1.3 Å)
主引用文献The Dingo Dataset: A Comprehensive Set of Data for the Sampl Challenge.
J.Comput.Aided Mol.Des., 26, 2012

224931

件を2024-09-11に公開中

PDB statisticsPDBj update infoContact PDBjnumon