PDB: 45118 件ウェブページステータス検索Chemie searchBIRD

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2ZS9	Pantothenate kinase from Mycobacterium tuberculosis (MtPanK) in complex with ADP and Pantothenate 分子名称: ADENOSINE-5'-DIPHOSPHATE, GLYCEROL, PANTOTHENOIC ACID, ... 著者 Chetnani, B, Das, S, Kumar, P, Surolia, A, Vijayan, M. 登録日 2008-09-04 公開日 2009-07-21 最終更新日 2023-11-01 実験手法 X-RAY DIFFRACTION (2.7 Å) 主引用文献 Mycobacterium tuberculosis pantothenate kinase: possible changes in location of ligands during enzyme action Acta Crystallogr.,Sect.D, 65, 2009
6G8J	14-3-3sigma in complex with a A130beta3A mutated YAP pS127 phosphopeptide 分子名称: 14-3-3 protein sigma, ACE-ARG-ALA-HIS-SEP-SER-PRO-BAL-SER-LEU-GLN, CHLORIDE ION, ... 著者 Andrei, S.A, Thijssen, V, Brunsveld, L, Ottmann, C, Milroy, L.G. 登録日 2018-04-09 公開日 2019-04-17 最終更新日 2024-01-31 実験手法 X-RAY DIFFRACTION (1.47 Å) 主引用文献 A study on the effect of synthetic alpha-to-beta3-amino acid mutations on the binding of phosphopeptides to 14-3-3 proteins. Chem.Commun.(Camb.), 55, 2019
6G39	Crystal structure of haspin F605Y mutant in complex with 5-iodotubercidin 分子名称: (2R,3R,4S,5R)-2-(4-AMINO-5-IODO-7H-PYRROLO[2,3-D]PYRIMIDIN-7-YL)-5-(HYDROXYMETHYL)TETRAHYDROFURAN-3,4-DIOL, (4R)-2-METHYLPENTANE-2,4-DIOL, IODIDE ION, ... 著者 Heroven, C, Chaikuad, A, Bountra, C, Arrowsmith, C.H, Edwards, A.M, Knapp, S, Structural Genomics Consortium (SGC) 登録日 2018-03-24 公開日 2018-04-18 最終更新日 2024-01-17 実験手法 X-RAY DIFFRACTION (1.45 Å) 主引用文献 Halogen-Aromatic pi Interactions Modulate Inhibitor Residence Times. Angew. Chem. Int. Ed. Engl., 57, 2018
5CE6	N-terminal domain of FACT complex subunit SPT16 from Cicer arietinum (chickpea) 分子名称: ACETATE ION, FACT-Spt16, POTASSIUM ION, ... 著者 Are, V.N, Ghosh, B, Kumar, A, Makde, R. 登録日 2015-07-06 公開日 2016-04-13 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (1.7 Å) 主引用文献 Crystal structure and dynamics of Spt16N-domain of FACT complex from Cicer arietinum. Int.J.Biol.Macromol., 88, 2016
6K8G	H/D exchanged Hen egg-white lysozyme 分子名称: CHLORIDE ION, Lysozyme C, SODIUM ION 著者 Kita, A, Morimoto, Y. 登録日 2019-06-11 公開日 2020-06-17 最終更新日 2024-04-03 実験手法 NEUTRON DIFFRACTION (2 Å), X-RAY DIFFRACTION 主引用文献 Hydrogen/deuterium exchange behavior in tetragonal hen egg-white lysozyme crystals affected by solution state. J.Appl.Crystallogr., 53, 2020
6JSG	Crystal Structure of BACE1 in complex with N-{3-[(4S)-2-amino-4-methyl-5,6-dihydro-4H-1,3-thiazin-4-yl]-4-fluorophenyl}-5-chloropyridine-2-carboxamide 分子名称: Beta-secretase 1, GLYCEROL, IODIDE ION, ... 著者 Fujimoto, K, Matsuoka, E, Asada, N, Tadano, G, Yamamoto, T, Nakahara, K, Fuchino, K, Ito, H, Kanegawa, N, Moechars, D, Gijsen, H.J.M, Kusakabe, K.I. 登録日 2019-04-08 公開日 2019-08-28 最終更新日 2023-11-22 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 Structure-Based Design of Selective beta-Site Amyloid Precursor Protein Cleaving Enzyme 1 (BACE1) Inhibitors: Targeting the Flap to Gain Selectivity over BACE2. J.Med.Chem., 62, 2019
1AOR	STRUCTURE OF A HYPERTHERMOPHILIC TUNGSTOPTERIN ENZYME, ALDEHYDE FERREDOXIN OXIDOREDUCTASE 分子名称: ALDEHYDE FERREDOXIN OXIDOREDUCTASE, FE (III) ION, IRON/SULFUR CLUSTER, ... 著者 Chan, M.K, Mukund, S, Kletzin, A, Adams, M.W.W, Rees, D.C. 登録日 1995-02-13 公開日 1995-04-20 最終更新日 2024-02-07 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 Structure of a hyperthermophilic tungstopterin enzyme, aldehyde ferredoxin oxidoreductase. Science, 267, 1995
3TFJ	DMSP-dependent demethylase from P. ubique - with cofactor THF 分子名称: (6S)-5,6,7,8-TETRAHYDROFOLATE, ACETATE ION, GLYCEROL, ... 著者 Schuller, D.J, Reisch, C.R, Moran, M.A, Whitman, W.B, Lanzilotta, W.N. 登録日 2011-08-15 公開日 2011-12-28 最終更新日 2023-09-13 実験手法 X-RAY DIFFRACTION (1.6 Å) 主引用文献 Structures of dimethylsulfoniopropionate-dependent demethylase from the marine organism Pelagabacter ubique. Protein Sci., 21, 2012
5CQK	Crystal Structure of the Cancer Genomic DNA Mutator APOBEC3B 分子名称: DNA dC->dU-editing enzyme APOBEC-3B, GLYCEROL, SODIUM ION, ... 著者 Shi, K, Kurahashi, K, Aihara, H. 登録日 2015-07-21 公開日 2015-10-07 最終更新日 2023-09-27 実験手法 X-RAY DIFFRACTION (1.88 Å) 主引用文献 Crystal Structure of the DNA Deaminase APOBEC3B Catalytic Domain. J.Biol.Chem., 290, 2015
6H10	Crystal Structure of KDM4D with tetrazolylhydrazide ligand NR073 分子名称: 1,2-ETHANEDIOL, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, CHLORIDE ION, ... 著者 Malecki, P.H, Weiss, M.S, Heinemann, U, Link, A. 登録日 2018-07-10 公開日 2020-01-29 最終更新日 2024-01-17 実験手法 X-RAY DIFFRACTION (1.104 Å) 主引用文献 Crystal Structure of KDM4D with tetrazolylhydrazide ligand NR073 To be published
3TFH	DMSP-dependent demethylase from P. ubique - apo 分子名称: GLYCEROL, GcvT-like Aminomethyltransferase protein, SODIUM ION 著者 Schuller, D.J, Reisch, C.R, Moran, M.A, Whitman, W.B, Lanzilotta, W.N. 登録日 2011-08-15 公開日 2011-12-28 最終更新日 2023-09-13 実験手法 X-RAY DIFFRACTION (2.1 Å) 主引用文献 Structures of dimethylsulfoniopropionate-dependent demethylase from the marine organism Pelagabacter ubique. Protein Sci., 21, 2012
6ILX	Crystal structure of PETase W159F mutant from Ideonella sakaiensis 分子名称: CHLORIDE ION, Poly(ethylene terephthalate) hydrolase, SODIUM ION 著者 Liu, C.C, Shi, C. 登録日 2018-10-20 公開日 2019-03-27 最終更新日 2020-09-09 実験手法 X-RAY DIFFRACTION (1.45 Å) 主引用文献 Structural and functional characterization of polyethylene terephthalate hydrolase from Ideonella sakaiensis. Biochem. Biophys. Res. Commun., 508, 2019
6GRP	Crystal Structure Of Human Transthyretin in complex with 3,5,6-trichloro-2-pyridinol (TC2P) 分子名称: 3,5,6-trichloro-2-pyridinol, SODIUM ION, Transthyretin 著者 Grundstrom, C, Zhang, J, Olofsson, A, Andersson, P.L, Sauer-Eriksson, A.E. 登録日 2018-06-12 公開日 2018-07-11 最終更新日 2024-01-17 実験手法 X-RAY DIFFRACTION (1.6 Å) 主引用文献 Interspecies Variation between Fish and Human Transthyretins in Their Binding of Thyroid-Disrupting Chemicals. Environ. Sci. Technol., 52, 2018
3TF9	Crystal structure of an H-NOX protein from Nostoc sp. PCC 7120 under 1 atm of xenon 分子名称: Alr2278 protein, PROTOPORPHYRIN IX CONTAINING FE, SODIUM ION, ... 著者 Winter, M.B, Herzik Jr, M.A, Kuriyan, J, Marletta, M.A. 登録日 2011-08-15 公開日 2011-11-09 最終更新日 2023-09-13 実験手法 X-RAY DIFFRACTION (2.5901 Å) 主引用文献 Tunnels modulate ligand flux in a heme nitric oxide/oxygen binding (H-NOX) domain. Proc.Natl.Acad.Sci.USA, 108, 2011
3TFS	Ternary complex structure of DNA polymerase beta with a gapped DNA substrate and a, b dAMP(CFH)PP in the active site: Stereoselective binding of (S) isomer 分子名称: 2'-deoxy-5'-O-[(S)-{(S)-fluoro[(S)-hydroxy(phosphonooxy)phosphoryl]methyl}(hydroxy)phosphoryl]adenosine, CHLORIDE ION, DNA (5'-D(*CP*CP*GP*AP*CP*TP*GP*CP*GP*CP*AP*TP*CP*AP*GP*C)-3'), ... 著者 Chamberlain, B.T, Batra, V.K, Beard, W.A, Kadina, A.P, Shock, D.D, Kashemirov, B.A, McKenna, C.E, Goodman, M.F, Wilson, S.H. 登録日 2011-08-16 公開日 2012-03-21 最終更新日 2023-09-13 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Stereospecific Formation of a Ternary Complex of (S)-alpha, beta-Fluoromethylene-dATP with DNA Pol beta. Chembiochem, 13, 2012
1VBY	Crystal Structure of the Hepatitis Delta Virus Gemonic Ribozyme Precursor, with C75U mutaion, and Mn2+ bound 分子名称: Hepatitis Delta virus ribozyme, MANGANESE (II) ION, SODIUM ION, ... 著者 Ke, A, Zhou, K, Ding, F, Cate, J.H.D, Doudna, J.A. 登録日 2004-03-03 公開日 2004-05-18 最終更新日 2023-12-27 実験手法 X-RAY DIFFRACTION (2.9 Å) 主引用文献 A Conformational Switch controls hepatitis delta virus ribozyme catalysis NATURE, 429, 2004
3RJH	Ternary complex of DNA Polymerase Beta with a gapped DNA containing (syn)8odG:dA at primer terminus and dG:dCMP(CF2)PPin the active site 分子名称: 2'-deoxy-5'-O-[(S)-{difluoro[(S)-hydroxy(phosphonooxy)phosphoryl]methyl}(hydroxy)phosphoryl]cytidine, CHLORIDE ION, DNA (5'-D(*CP*CP*GP*AP*CP*GP*(8OG)P*CP*GP*CP*AP*TP*CP*AP*GP*C)-3'), ... 著者 Batra, V.K, Beard, W.A, Wilson, S.H. 登録日 2011-04-15 公開日 2012-01-18 最終更新日 2023-09-13 実験手法 X-RAY DIFFRACTION (2.2 Å) 主引用文献 Binary complex crystal structure of DNA polymerase beta reveals multiple conformations of the templating 8-oxoguanine lesion Proc.Natl.Acad.Sci.USA, 109, 2012
6G36	Crystal structure of haspin in complex with 5-chlorotubercidin 分子名称: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, 5-chlorotubercidin, COBALT (II) ION, ... 著者 Heroven, C, Chaikuad, A, Bountra, C, Arrowsmith, C.H, Edwards, A.M, Knapp, S, Structural Genomics Consortium (SGC) 登録日 2018-03-24 公開日 2018-04-18 最終更新日 2024-01-17 実験手法 X-RAY DIFFRACTION (1.46 Å) 主引用文献 Halogen-Aromatic pi Interactions Modulate Inhibitor Residence Times. Angew. Chem. Int. Ed. Engl., 57, 2018
3R69	Molecular analysis of the interaction of the HDL-receptor SR-BI with the PDZ3 domain of its adaptor protein PDZK1 分子名称: CITRIC ACID, Na(+)/H(+) exchange regulatory cofactor NHE-RF3, Scavenger receptor class B member 1 著者 Kocher, O, Birrane, G, Krieger, M. 登録日 2011-03-21 公開日 2011-05-18 最終更新日 2023-09-13 実験手法 X-RAY DIFFRACTION (1.499 Å) 主引用文献 Identification of the PDZ3 Domain of the Adaptor Protein PDZK1 as a Second, Physiologically Functional Binding Site for the C Terminus of the High Density Lipoprotein Receptor Scavenger Receptor Class B Type I. J.Biol.Chem., 286, 2011
3RAY	Crystal structure of Methyltransferase domain of human PR domain-containing protein 11 分子名称: CHLORIDE ION, PR domain-containing protein 11, SODIUM ION, ... 著者 Dong, A, Zeng, H, Loppnau, P, Walker, J.R, Bountra, C, Weigelt, J, Arrowsmith, C.H, Edwards, A.M, Min, J, Wu, H, Structural Genomics Consortium (SGC) 登録日 2011-03-28 公開日 2011-04-20 最終更新日 2023-09-13 実験手法 X-RAY DIFFRACTION (1.73 Å) 主引用文献 Crystal structure of Methyltransferase domain of human PR domain-containing protein 11 To be Published
3BOV	Crystal structure of the receptor binding domain of mouse PD-L2 分子名称: FORMIC ACID, Programmed cell death 1 ligand 2, SODIUM ION 著者 Lazar-Molnar, E, Ramagopal, U, Cao, E, Toro, R, Nathenson, S.G, Almo, S.C. 登録日 2007-12-17 公開日 2008-07-15 最終更新日 2024-04-03 実験手法 X-RAY DIFFRACTION (1.77 Å) 主引用文献 Crystal structure of the complex between programmed death-1 (PD-1) and its ligand PD-L2. Proc.Natl.Acad.Sci.USA, 105, 2008
3RC3	Human Mitochondrial Helicase Suv3 分子名称: ATP-dependent RNA helicase SUPV3L1, mitochondrial, AZIDE ION, ... 著者 Dauter, Z, Jedrzejczak, R, Dauter, M, Szczesny, R, Stepien, P. 登録日 2011-03-30 公開日 2011-05-11 最終更新日 2017-11-08 実験手法 X-RAY DIFFRACTION (2.08 Å) 主引用文献 Human Suv3 protein reveals unique features among SF2 helicases. Acta Crystallogr.,Sect.D, 67, 2011
5COQ	The effect of valine to alanine mutation on InhA enzyme crystallization pattern and substrate binding loop conformation and flexibility 分子名称: 5-HEXYL-2-(2-METHYLPHENOXY)PHENOL, Enoyl-[acyl-carrier-protein] reductase [NADH], NICOTINAMIDE-ADENINE-DINUCLEOTIDE, ... 著者 Li, H.-J, Lai, C.-T, Liu, N, Yu, W, Shah, S, Bommineni, G.R, Perrone, V, Garcia-Diaz, M, Tonge, P.J, Simmerling, C. 登録日 2015-07-20 公開日 2015-08-05 最終更新日 2024-03-06 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 Rational Modulation of the Induced-Fit Conformational Change for Slow-Onset Inhibition in Mycobacterium tuberculosis InhA. Biochemistry, 54, 2015
3RJF	Ternary complex of DNA Polymerase Beta with a gapped DNA containing (syn)8odG at template position paired with non-hydrolyzable dATP analog (dApCPP) 分子名称: 2'-deoxy-5'-O-[(S)-hydroxy{[(S)-hydroxy(phosphonooxy)phosphoryl]methyl}phosphoryl]adenosine, CHLORIDE ION, DNA (5'-D(*CP*CP*GP*AP*CP*(8OG)P*TP*CP*GP*CP*AP*TP*CP*AP*GP*C)-3'), ... 著者 Batra, V.K, Beard, W.A, Wilson, S.H. 登録日 2011-04-15 公開日 2012-01-18 最終更新日 2023-09-13 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 Binary complex crystal structure of DNA polymerase beta reveals multiple conformations of the templating 8-oxoguanine lesion Proc.Natl.Acad.Sci.USA, 109, 2012
1V75	Crystal structure of hemoglobin D from the Aldabra giant tortoise (Geochelone gigantea) at 2.0 A resolution 分子名称: Hemoglobin A and D beta chain, Hemoglobin D alpha chain, PROTOPORPHYRIN IX CONTAINING FE 著者 Kuwada, T, Hasegawa, T, Satoh, I, Ishikawa, K, Shishikura, F. 登録日 2003-12-12 公開日 2003-12-30 最終更新日 2023-12-27 実験手法 X-RAY DIFFRACTION (2.02 Å) 主引用文献 Crystallization and preliminary X-ray diffraction study of hemoglobin D from the Aldabra giant tortoise, Geochelone gigantea. Protein Pept.Lett., 10, 2003

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