2RSU
 
 | | Alternative structure of Ubiquitin | | 分子名称: | Ubiquitin | | 著者 | Kitazawa, S, Kameda, T, Yagi-Utsumi, M, Kato, K, Kitahara, R. | | 登録日 | 2012-06-15 | | 公開日 | 2013-03-27 | | 最終更新日 | 2024-05-15 | | 実験手法 | SOLUTION NMR | | 主引用文献 | Solution Structure of the Q41N Variant of Ubiquitin as a Model for the Alternatively Folded N2 State of Ubiquitin
Biochemistry, 52, 2013
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2RU6
 | | The pure alternative state of ubiquitin | | 分子名称: | Ubiquitin | | 著者 | Kitazawa, S, Kameda, T, Kumo, A, Utsumi, M, Baxter, N, Kato, K, Williamson, M.P, Kitahara, R. | | 登録日 | 2013-12-04 | | 公開日 | 2014-02-12 | | 最終更新日 | 2024-05-15 | | 実験手法 | SOLUTION NMR | | 主引用文献 | Close Identity between Alternatively Folded State N2 of Ubiquitin and the Conformation of the Protein Bound to the Ubiquitin-Activating Enzyme
Biochemistry, 53, 2014
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1ZW7
 | | Elimination of the C-cap in Ubiquitin Structure, Dynamics and Thermodynamic Consequences | | 分子名称: | Ubiquitin | | 著者 | Ermolenko, D.N, Dangi, B, Gronenborn, A.M, Makhatadze, G.I. | | 登録日 | 2005-06-03 | | 公開日 | 2006-05-16 | | 最終更新日 | 2024-05-22 | | 実験手法 | SOLUTION NMR | | 主引用文献 | Elimination of the C-cap in ubiquitin-structure, dynamics and thermodynamic consequences.
Biophys.Chem., 126, 2007
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6OQ2
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2MSG
 | | Solid-state NMR structure of ubiquitin | | 分子名称: | Ubiquitin | | 著者 | Lakomek, N, Habenstein, B, Loquet, A, Shi, C, Giller, K, Wolff, S, Becker, S, Fasshuber, H, Lange, A. | | 登録日 | 2014-08-04 | | 公開日 | 2015-02-18 | | 最終更新日 | 2024-05-15 | | 実験手法 | SOLID-STATE NMR | | 主引用文献 | Structural heterogeneity in microcrystalline ubiquitin studied by solid-state NMR.
Protein Sci., 24, 2015
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2KOX
 | | NMR residual dipolar couplings identify long range correlated motions in the backbone of the protein ubiquitin | | 分子名称: | Ubiquitin | | 著者 | Fenwick, R.B, Richter, B, Lee, D, Walter, K.F.A, Milovanovic, D, Becker, S, Lakomek, N.A, Griesinger, C, Salvatella, X. | | 登録日 | 2009-10-02 | | 公開日 | 2011-06-08 | | 最終更新日 | 2024-05-01 | | 実験手法 | SOLUTION NMR | | 主引用文献 | Weak Long-Range Correlated Motions in a Surface Patch of Ubiquitin Involved in Molecular Recognition
J.Am.Chem.Soc., 2011
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2K39
 | | Recognition dynamics up to microseconds revealed from RDC derived ubiquitin ensemble in solution | | 分子名称: | Ubiquitin | | 著者 | Lange, O.F, Lakomek, N.A, Fares, C, Schroder, G, Walter, K, Becker, S, Meiler, J, Grubmuller, H, Griesinger, C, de Groot, B.L. | | 登録日 | 2008-04-25 | | 公開日 | 2008-06-24 | | 最終更新日 | 2024-05-01 | | 実験手法 | SOLUTION NMR | | 主引用文献 | Recognition dynamics up to microseconds revealed from an RDC-derived ubiquitin ensemble in solution.
Science, 320, 2008
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2MI8
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6K4I
 | | The partially disordered conformation of ubiquitin (Q41N variant) | | 分子名称: | ubiquitin | | 著者 | Wakamoto, T, Ikeya, T, Kitazawa, S, Baxter, N.J, Williamson, M.P, Kitahara, R. | | 登録日 | 2019-05-24 | | 公開日 | 2019-10-30 | | 最終更新日 | 2024-05-29 | | 実験手法 | SOLUTION NMR | | 主引用文献 | Paramagnetic relaxation enhancement-assisted structural characterization of a partially disordered conformation of ubiquitin.
Protein Sci., 28, 2019
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1FBV
 | | STRUCTURE OF A CBL-UBCH7 COMPLEX: RING DOMAIN FUNCTION IN UBIQUITIN-PROTEIN LIGASES | | 分子名称: | SIGNAL TRANSDUCTION PROTEIN CBL, SULFATE ION, UBIQUITIN-CONJUGATING ENZYME E12-18 KDA UBCH7, ... | | 著者 | Zheng, N, Wang, P, Jeffrey, P.D, Pavletich, N.P. | | 登録日 | 2000-07-17 | | 公開日 | 2000-08-30 | | 最終更新日 | 2017-10-04 | | 実験手法 | X-RAY DIFFRACTION (2.9 Å) | | 主引用文献 | Structure of a c-Cbl-UbcH7 complex: RING domain function in ubiquitin-protein ligases.
Cell(Cambridge,Mass.), 102, 2000
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1WR1
 | | The complex structure of Dsk2p UBA with ubiquitin | | 分子名称: | Ubiquitin, Ubiquitin-like protein DSK2 | | 著者 | Ohno, A, Jee, J.G, Fujiwara, K, Tenno, T, Goda, N, Tochio, H, Hiroaki, H, kobayashi, H, Shirakawa, M. | | 登録日 | 2004-10-08 | | 公開日 | 2005-04-19 | | 最終更新日 | 2023-09-27 | | 実験手法 | SOLUTION NMR | | 主引用文献 | Structure of the UBA domain of Dsk2p in complex with ubiquitin molecular determinants for ubiquitin recognition.
Structure, 13, 2005
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5XK4
 | | Retracted state of S65-phosphorylated ubiquitin | | 分子名称: | Polyubiquitin-B | | 著者 | Dong, X, Gong, Z, Qin, L.Y, Ran, M.L, Zhang, C.L, Liu, K, Liu, Z, Zhang, W.P, Tang, C. | | 登録日 | 2017-05-05 | | 公開日 | 2017-06-28 | | 最終更新日 | 2023-06-14 | | 実験手法 | SOLUTION NMR | | 主引用文献 | Ubiquitin S65 phosphorylation engenders a pH-sensitive conformational switch
Proc. Natl. Acad. Sci. U.S.A., 114, 2017
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3L1Z
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4NQK
 | | Structure of an Ubiquitin complex | | 分子名称: | Probable ATP-dependent RNA helicase DDX58, Ubiquitin | | 著者 | Peisley, A, Wu, B, Hur, S. | | 登録日 | 2013-11-25 | | 公開日 | 2014-03-05 | | 最終更新日 | 2024-02-28 | | 実験手法 | X-RAY DIFFRACTION (3.7 Å) | | 主引用文献 | Structural basis for ubiquitin-mediated antiviral signal activation by RIG-I.
Nature, 509, 2014
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5XK5
 | | Relaxed state of S65-phosphorylated ubiquitin | | 分子名称: | Polyubiquitin-B | | 著者 | Xu, D, Zhou, G, Qin, L.Y, Ran, M.L, Zhang, C.L, Liu, K, Liu, Z, Zhang, W.P, Tang, C. | | 登録日 | 2017-05-05 | | 公開日 | 2017-06-28 | | 最終更新日 | 2023-06-14 | | 実験手法 | SOLUTION NMR | | 主引用文献 | Ubiquitin S65 phosphorylation engenders a pH-sensitive conformational switch
Proc. Natl. Acad. Sci. U.S.A., 114, 2017
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6WTG
 | | SdeA DUB Domain in complex with Ubiquitin | | 分子名称: | Ubiquitin, Ubiquitinating/deubiquitinating enzyme SdeA | | 著者 | Kenny, S, Sheedlo, M, Das, C. | | 登録日 | 2020-05-02 | | 公開日 | 2021-03-03 | | 最終更新日 | 2023-10-18 | | 実験手法 | X-RAY DIFFRACTION (2.63 Å) | | 主引用文献 | Insights into Ubiquitin Product Release in Hydrolysis Catalyzed by the Bacterial Deubiquitinase SdeA.
Biochemistry, 60, 2021
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3L1X
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8C07
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8C06
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6DJ9
 | | Structure of the USP15 DUSP domain in complex with a high-affinity Ubiquitin Variant (UbV) | | 分子名称: | Ubiquitin Variant UbV 15.D, Ubiquitin carboxyl-terminal hydrolase 15 | | 著者 | Singer, A.U, Teyra, J, Boehmelt, G, Lenter, M, Sicheri, F, Sidhu, S.S. | | 登録日 | 2018-05-24 | | 公開日 | 2019-01-23 | | 最終更新日 | 2023-10-11 | | 実験手法 | X-RAY DIFFRACTION (3.1 Å) | | 主引用文献 | Structural and Functional Characterization of Ubiquitin Variant Inhibitors of USP15.
Structure, 27, 2019
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8HTF
 | | Crystal structure of an effector in complex with ubiquitin | | 分子名称: | NAD(+)--protein-threonine ADP-ribosyltransferase, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, Ubiquitin-40S ribosomal protein S27a (Fragment) | | 著者 | Tan, J, Wang, X, Zhou, Y, Zhu, Y. | | 登録日 | 2022-12-21 | | 公開日 | 2023-11-22 | | 最終更新日 | 2024-04-10 | | 実験手法 | X-RAY DIFFRACTION (2.151 Å) | | 主引用文献 | Molecular basis of threonine ADP-ribosylation of ubiquitin by bacterial ARTs.
Nat.Chem.Biol., 20, 2024
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8HTC
 | | Crystal structure of a SeMet-labeled effector from Chromobacterium violaceum in complex with Ubiquitin | | 分子名称: | NAD(+)--protein-threonine ADP-ribosyltransferase, Ubiquitin-40S ribosomal protein S27a (Fragment) | | 著者 | Tan, J, Wang, X, Zhou, Y, Zhu, Y. | | 登録日 | 2022-12-21 | | 公開日 | 2023-11-22 | | 最終更新日 | 2024-04-10 | | 実験手法 | X-RAY DIFFRACTION (2.2 Å) | | 主引用文献 | Molecular basis of threonine ADP-ribosylation of ubiquitin by bacterial ARTs.
Nat.Chem.Biol., 20, 2024
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8HTE
 | | Crystal structure of an effector mutant in complex with ubiquitin | | 分子名称: | GLYCEROL, NAD(+)--protein-threonine ADP-ribosyltransferase, NICOTINAMIDE, ... | | 著者 | Tan, J, Wang, X, Zhou, Y, Zhu, Y. | | 登録日 | 2022-12-21 | | 公開日 | 2023-11-22 | | 最終更新日 | 2024-04-10 | | 実験手法 | X-RAY DIFFRACTION (2.307 Å) | | 主引用文献 | Molecular basis of threonine ADP-ribosylation of ubiquitin by bacterial ARTs.
Nat.Chem.Biol., 20, 2024
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8HTD
 | | Crystal structure of an effector from Chromobacterium violaceum in complex with ubiquitin | | 分子名称: | NAD(+)--protein-threonine ADP-ribosyltransferase, Ubiquitin | | 著者 | Tan, J, Wang, X, Zhou, Y, Zhu, Y. | | 登録日 | 2022-12-21 | | 公開日 | 2023-11-22 | | 最終更新日 | 2024-04-10 | | 実験手法 | X-RAY DIFFRACTION (1.848 Å) | | 主引用文献 | Molecular basis of threonine ADP-ribosylation of ubiquitin by bacterial ARTs.
Nat.Chem.Biol., 20, 2024
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3KPA
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