PDB: 201 件ウェブページステータス検索Chemie searchBIRD

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5IYY	X-ray structure of neuropilin-1 b1 domain complexed with Arg-4 ligand. 分子名称: Neuropilin-1, N~2~-[(benzyloxy)carbonyl]-L-arginine 著者 Fotinou, C, Rana, R, Djordjevic, S, Yelland, T. 登録日 2016-03-24 公開日 2017-04-05 最終更新日 2024-10-23 実験手法 X-RAY DIFFRACTION (1.6 Å) 主引用文献 Architecture and hydration of the arginine-binding site of neuropilin-1. FEBS J., 285, 2018
7D2A	CBM32 of AlyQ in complex with 4,5-unsaturated mannuronic acid 分子名称: 4-deoxy-alpha-L-erythro-hex-4-enopyranuronic acid-(1-4)-alpha-L-gulopyranuronic acid, AlyQ, CALCIUM ION, ... 著者 Teh, A.H, Sim, P.F. 登録日 2020-09-16 公開日 2020-12-30 最終更新日 2023-11-29 実験手法 X-RAY DIFFRACTION (1.57 Å) 主引用文献 Structural basis for binding uronic acids by family 32 carbohydrate-binding modules. Biochem.Biophys.Res.Commun., 533, 2020
7D29	CBM32 of AlyQ 分子名称: AlyQ, CALCIUM ION 著者 Teh, A.H, Sim, P.F. 登録日 2020-09-16 公開日 2020-12-30 最終更新日 2023-11-29 実験手法 X-RAY DIFFRACTION (1.7 Å) 主引用文献 Structural basis for binding uronic acids by family 32 carbohydrate-binding modules. Biochem.Biophys.Res.Commun., 533, 2020
4PT6	The discobody: an engineered discoidin domain from factor VIII that binds v 3 integrin with antibody-like affinities 分子名称: Coagulation factor VIII 著者 Kym, G, Shi, K, Kamajaya, A, Hamdouche, S, Kostecki, J.S, Wannier, T, Li, B, Nikolovski, P, Mayo, S.L. 登録日 2014-03-10 公開日 2015-04-08 最終更新日 2024-10-30 実験手法 X-RAY DIFFRACTION (2.1 Å) 主引用文献 The discobody: an engineered discoidin domain from factor VIII that binds v 3 integrin with antibody-like affinities To be Published
4QDQ	Physical basis for Nrp2 ligand binding 分子名称: GLYCEROL, Neuropilin-2, SULFATE ION 著者 Parker, M.W, Vander Kooi, C.W. 登録日 2014-05-14 公開日 2015-04-15 最終更新日 2024-11-06 実験手法 X-RAY DIFFRACTION (1.95 Å) 主引用文献 Structural Basis for VEGF-C Binding to Neuropilin-2 and Sequestration by a Soluble Splice Form. Structure, 23, 2015
4P5Y	Structure of CBM32-3 from a family 31 glycoside hydrolase from Clostridium perfringens in complex with N-acetylgalactosamine 分子名称: 2-acetamido-2-deoxy-beta-D-galactopyranose, CALCIUM ION, Glycosyl hydrolase, ... 著者 Grondin, J.M, Allingham, J.S, Boraston, A.B, Smith, S.P. 登録日 2014-03-04 公開日 2015-10-07 最終更新日 2023-09-27 実験手法 X-RAY DIFFRACTION (2.5 Å) 主引用文献 Diverse modes of galacto-specific carbohydrate recognition by a family 31 glycoside hydrolase from Clostridium perfringens. PLoS ONE, 12, 2017
4RN5	B1 domain of human Neuropilin-1 with acetate ion in a ligand-binding site 分子名称: ACETATE ION, GLYCEROL, Neuropilin-1, ... 著者 Allerston, C.K, Yelland, T.S, Jarvis, A, Jenkins, K, Winfield, N, Cheng, L, Jia, H, Zachary, I, Selwood, D.L, Djordjevic, S. 登録日 2014-10-23 公開日 2015-10-28 実験手法 X-RAY DIFFRACTION (1.73 Å) 主引用文献 Conserved water molecules in a ligand-binding site of neuropilin-1 To be Published
4QDR	Physical basis for Nrp2 ligand binding 分子名称: Neuropilin-2 著者 Parker, M.W, Vander Kooi, C.W. 登録日 2014-05-14 公開日 2015-04-15 最終更新日 2024-10-30 実験手法 X-RAY DIFFRACTION (2.4 Å) 主引用文献 Structural Basis for VEGF-C Binding to Neuropilin-2 and Sequestration by a Soluble Splice Form. Structure, 23, 2015
4QDS	Physical basis for Nrp2 ligand binding 分子名称: ACETATE ION, GLYCEROL, Neuropilin-2 著者 Parker, M.W, Vander Kooi, C.W. 登録日 2014-05-14 公開日 2015-04-15 最終更新日 2023-09-20 実験手法 X-RAY DIFFRACTION (2.4 Å) 主引用文献 Structural Basis for VEGF-C Binding to Neuropilin-2 and Sequestration by a Soluble Splice Form. Structure, 23, 2015
4TXW	Crystal structure of CBM32-4 from the Clostridium perfringens NagH 分子名称: 1,2-ETHANEDIOL, CALCIUM ION, Hyaluronoglucosaminidase 著者 Grondin, J.M, Ficko-Blean, E, Boraston, A.B, Smith, S.P. 登録日 2014-07-07 公開日 2015-12-09 最終更新日 2023-12-27 実験手法 X-RAY DIFFRACTION (1.4 Å) 主引用文献 Solution Structure and Dynamics of Full-length GH84A, a multimodular B-N-acetylglucosaminidase from Clostridium perfringens To Be Published
3I97	B1 domain of human Neuropilin-1 bound with small molecule EG00229 分子名称: (S)-2-(3-(benzo[c][1,2,5]thiadiazole-4-sulfonamido)thiophene-2-carboxamido)-5-guanidinopentanoic acid, GLYCEROL, Neuropilin-1 著者 Allerston, C.K, Djordjevic, S. 登録日 2009-07-10 公開日 2010-03-02 最終更新日 2023-09-06 実験手法 X-RAY DIFFRACTION (2.9 Å) 主引用文献 Small molecule inhibitors of the neuropilin-1 vascular endothelial growth factor A (VEGF-A) interaction. J.Med.Chem., 53, 2010
3JD6	Double octamer structure of retinoschisin, a cell-cell adhesion protein of the retina 分子名称: Retinoschisin 著者 Tolun, G, Vijayasarathy, C, Huang, R, Zeng, Y, Li, Y, Steven, A.C, Sieving, P.A, Heymann, J.B. 登録日 2016-04-12 公開日 2016-05-11 最終更新日 2018-07-18 実験手法 ELECTRON MICROSCOPY (4.1 Å) 主引用文献 Paired octamer rings of retinoschisin suggest a junctional model for cell-cell adhesion in the retina. Proc.Natl.Acad.Sci.USA, 113, 2016
4A41	CpGH89CBM32-5, from Clostridium perfringens, in complex with galactose 分子名称: ALPHA-N-ACETYLGLUCOSAMINIDASE FAMILY PROTEIN, CALCIUM ION, SODIUM ION, ... 著者 Ficko-Blean, E, Stuart, C.P, Suits, M.D, Cid, M, Tessier, M, Woods, R.J, Boraston, A.B. 登録日 2011-10-06 公開日 2012-04-04 最終更新日 2024-05-08 実験手法 X-RAY DIFFRACTION (1.55 Å) 主引用文献 Carbohydrate Recognition by an Architecturally Complex Alpha-N-Acetylglucosaminidase from Clostridium Perfringens. Plos One, 7, 2012
4A44	CpGH89CBM32-5, from Clostridium perfringens, in complex with the Tn Antigen 分子名称: 2-acetamido-2-deoxy-alpha-D-galactopyranose, Alpha-N-acetylglucosaminidase, CALCIUM ION, ... 著者 Ficko-Blean, E, Stuart, C.P, Suits, M.D, Cid, M, Tessier, M, Woods, R.J, Boraston, A.B. 登録日 2011-10-06 公開日 2012-04-04 最終更新日 2024-06-19 実験手法 X-RAY DIFFRACTION (1.7 Å) 主引用文献 Carbohydrate Recognition by an Architecturally Complex Alpha-N-Acetylglucosaminidase from Clostridium Perfringens. Plos One, 7, 2012
4AAX	CpGH89CBM32-5, from Clostridium perfringens, in complex with N- acetylgalactosamine 分子名称: 2-acetamido-2-deoxy-beta-D-galactopyranose, ALPHA-N-ACETYLGLUCOSAMINIDASE, CALCIUM ION, ... 著者 Ficko-Blean, E, Stuart, C.P, Suits, M.D, Cid, M, Tessier, M, Woods, R.J, Boraston, A.B. 登録日 2011-12-05 公開日 2012-04-04 最終更新日 2024-05-08 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 Carbohydrate Recognition by an Architecturally Complex Alpha-N-Acetylglucosaminidase from Clostridium Perfringens. Plos One, 7, 2012
3HNY	Factor VIII Trp2313-His2315 segment is involved in membrane binding as shown by crystal structure of complex between factor VIII C2 domain and an inhibitor 分子名称: Coagulation factor VIII 著者 Liu, Z, Yuan, C. 登録日 2009-06-01 公開日 2010-01-19 最終更新日 2023-11-01 実験手法 X-RAY DIFFRACTION (1.07 Å) 主引用文献 Trp2313-His2315 of factor VIII C2 domain is involved in membrane binding: structure of a complex between the C2 domain and an inhibitor of membrane binding. J.Biol.Chem., 285, 2010
3HNB	Factor VIII Trp2313-His2315 segment is involved in membrane binding as shown by crystal structure of complex between factor VIII C2 domain and an inhibitor 分子名称: (2R)-1-(2,4-dichlorophenoxy)-3-[(2E)-2-imino-3-(2-piperidin-1-ylethyl)-2,3-dihydro-1H-benzimidazol-1-yl]propan-2-ol, Coagulation factor VIII 著者 Liu, Z, Yuan, C. 登録日 2009-05-31 公開日 2010-01-19 最終更新日 2024-11-06 実験手法 X-RAY DIFFRACTION (1.15 Å) 主引用文献 Trp2313-His2315 of factor VIII C2 domain is involved in membrane binding: structure of a complex between the C2 domain and an inhibitor of membrane binding. J.Biol.Chem., 285, 2010
4A45	CpGH89CBM32-5, from Clostridium perfringens, in complex with GalNAc- beta-1,3-galactose 分子名称: 2-acetamido-2-deoxy-beta-D-galactopyranose-(1-3)-beta-D-galactopyranose, ALPHA-N-ACETYLGLUCOSAMINIDASE FAMILY PROTEIN, CALCIUM ION, ... 著者 Ficko-Blean, E, Stuart, C.P, Suits, M.D, Cid, M, Tessier, M, Woods, R.J, Boraston, A.B. 登録日 2011-10-06 公開日 2012-04-04 最終更新日 2024-05-08 実験手法 X-RAY DIFFRACTION (1.75 Å) 主引用文献 Carbohydrate Recognition by an Architecturally Complex Alpha-N-Acetylglucosaminidase from Clostridium Perfringens. Plos One, 7, 2012
3HNM	Crystal Structure of Protein BT_411 (putative chitobiase, fragment 298-461) from Bacteroides thetaiotaomicron, Northeast Structural Genomics Consortium Target BtR319D 分子名称: MAGNESIUM ION, Putative chitobiase 著者 Kuzin, A, Abashidze, M, Seetharaman, J, Sahdev, S, Xiao, R, Ciccosanti, C, Foote, E.L, Lee, D, Everett, J.K, Nair, R, Acton, T.B, Rost, B, Montelione, G.T, Hunt, J.F, Tong, L, Northeast Structural Genomics Consortium (NESG) 登録日 2009-05-31 公開日 2009-07-07 最終更新日 2024-11-06 実験手法 X-RAY DIFFRACTION (3 Å) 主引用文献 Northeast Structural Genomics Consortium Target BtR319D To be published
3HOB	Factor VIII Trp2313-His2315 segment is involved in membrane binding as shown by crystal structure of complex between factor VIII C2 domain and an inhibitor 分子名称: Coagulation factor VIII 著者 Liu, Z, Yuan, C. 登録日 2009-06-01 公開日 2010-01-19 最終更新日 2024-10-30 実験手法 X-RAY DIFFRACTION (2.07 Å) 主引用文献 Trp2313-His2315 of factor VIII C2 domain is involved in membrane binding: structure of a complex between the C2 domain and an inhibitor of membrane binding. J.Biol.Chem., 285, 2010
4A42	CpGH89CBM32-6 produced by Clostridium perfringens 分子名称: ALPHA-N-ACETYLGLUCOSAMINIDASE FAMILY PROTEIN, CALCIUM ION 著者 Ficko-Blean, E, Stuart, C.P, Suits, M.D, Cid, M, Tessier, M, Woods, R.J, Boraston, A.B. 登録日 2011-10-06 公開日 2012-04-04 最終更新日 2024-10-23 実験手法 X-RAY DIFFRACTION (1.55 Å) 主引用文献 Carbohydrate Recognition by an Architecturally Complex Alpha-N-Acetylglucosaminidase from Clostridium Perfringens. Plos One, 7, 2012
2J7M	Characterization of a Family 32 CBM 分子名称: CALCIUM ION, HYALURONIDASE, alpha-L-fucopyranose-(1-2)-beta-D-galactopyranose-(1-4)-2-acetamido-2-deoxy-alpha-D-glucopyranose 著者 Ficko-Blean, E, Boraston, A.B. 登録日 2006-10-12 公開日 2006-10-16 最終更新日 2024-05-08 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 The Interaction of a Carbohydrate-Binding Module from a Clostridium Perfringens N-Acetyl-Beta-Hexosaminidase with its Carbohydrate Receptor J.Biol.Chem., 281, 2006
2KD7	Solution NMR structure of F5/8 type C-terminal domain of a putative chitobiase from Bacteroides thetaiotaomicron. Northeast Structural Genomics Consortium target BtR324B 分子名称: Putative chitobiase 著者 Eletsky, A, Mills, J.L, Lee, H, Lee, D, Jiang, M, Ciccosanti, C, Xiao, R, Nair, R, Everett, J.K, Swapna, G.V.T, Acton, T.B, Rost, B, Montelione, G.T, Prestegard, J.H, Szyperski, T, Northeast Structural Genomics Consortium (NESG) 登録日 2009-01-04 公開日 2009-02-03 最終更新日 2024-05-22 実験手法 SOLUTION NMR 主引用文献 Solution NMR structure of F5/8 type C-terminal domain of a putative chitobiase from Bacteroides thetaiotaomicron. To be Published
2J1A	Structure of CBM32 from Clostridium perfringens beta-N- acetylhexosaminidase GH84C in complex with galactose 分子名称: CALCIUM ION, HYALURONIDASE, beta-D-galactopyranose 著者 Ficko-Blean, E, Boraston, A.B. 登録日 2006-08-09 公開日 2006-08-22 最終更新日 2024-05-08 実験手法 X-RAY DIFFRACTION (1.49 Å) 主引用文献 The Interaction of a Carbohydrate-Binding Module from a Clostridium Perfringens N-Acetyl-Beta-Hexosaminidase with its Carbohydrate Receptor J.Biol.Chem., 281, 2006
2J1E	High Resolution Crystal Structure of CBM32 from a N-acetyl-beta- hexosaminidase in complex with lacNAc 分子名称: CALCIUM ION, HYALURONIDASE, beta-D-galactopyranose-(1-4)-2-acetamido-2-deoxy-alpha-D-glucopyranose 著者 Ficko-Blean, E, Boraston, A.B. 登録日 2006-08-10 公開日 2006-09-20 最終更新日 2024-05-08 実験手法 X-RAY DIFFRACTION (2.4 Å) 主引用文献 The Interaction of a Carbohydrate-Binding Module from a Clostridium Perfringens N-Acetyl-Beta-Hexosaminidase with its Carbohydrate Receptor J.Biol.Chem., 281, 2006

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