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4JMG
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Crystal structure of the synthetic protein in complex with pY peptide
分子名称: Clamp Ptpn11_pY580, MAGNESIUM ION, Tyrosine-protein phosphatase non-receptor type 11
著者Yasui, N, Smith, L, Koide, S.
登録日2013-03-14
公開日2014-04-23
最終更新日2014-08-06
実験手法X-RAY DIFFRACTION (1.403 Å)
主引用文献Directed network wiring identifies a key protein interaction in embryonic stem cell differentiation.
Mol.Cell, 54, 2014
4JN2
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An Antidote for Dabigatran
分子名称: GLYCEROL, N-[(2-{[(4-carbamimidoylphenyl)amino]methyl}-1-methyl-1H-benzimidazol-5-yl)carbonyl]-N-pyridin-2-yl-beta-alanine, anti dabigatran Fab
著者Schiele, F, Nar, H.
登録日2013-03-14
公開日2013-03-27
最終更新日2015-03-11
実験手法X-RAY DIFFRACTION (1.71 Å)
主引用文献A specific antidote for dabigatran: functional and structural characterization.
Blood, 121, 2013
4N06
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BU of 4n06 by Molmil
Crystal structure of Cas1 from Archaeoglobus fulgidus and its nucleolytic activity
分子名称: CRISPR-associated endonuclease Cas1 1
著者Kim, T.Y, Shin, M, Yen, L.H.T, Kim, J.S.
登録日2013-10-01
公開日2014-01-15
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Crystal structure of Cas1 from Archaeoglobus fulgidus and characterization of its nucleolytic activity
Biochem.Biophys.Res.Commun., 441, 2013
5NBA
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BU of 5nba by Molmil
Complement factor D in complex with the inhibitor (2S,4R)-4-Fluoro-pyrrolidine-1,2-dicarboxylic acid 1-[(1-carbamoyl-1H-indol-3-yl)-amide] 2-[(3-trifluoromethoxy-phenyl)-amide]
分子名称: (2~{S},4~{R})-~{N}1-(1-aminocarbonylindol-3-yl)-4-fluoranyl-~{N}2-[3-(trifluoromethyloxy)phenyl]pyrrolidine-1,2-dicarboxamide, Complement factor D
著者Mac Sweeney, A, Ostermann, N.
登録日2017-03-01
公開日2017-06-28
最終更新日2017-07-26
実験手法X-RAY DIFFRACTION (1.87 Å)
主引用文献Discovery of Highly Potent and Selective Small-Molecule Reversible Factor D Inhibitors Demonstrating Alternative Complement Pathway Inhibition in Vivo.
J. Med. Chem., 60, 2017
4J03
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Crystal structure of human soluble epoxide hydrolase complexed with fulvestrant
分子名称: (7beta,9beta,13alpha,17beta)-7-{9-[(R)-(4,4,5,5,5-pentafluoropentyl)sulfinyl]nonyl}estra-1(10),2,4-triene-3,17-diol, Bifunctional epoxide hydrolase 2, MAGNESIUM ION, ...
著者Morisseau, C, Pakhomova, S, Hwang, S.H, Newcomer, M.E, Hammock, B.D.
登録日2013-01-30
公開日2013-06-05
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.92 Å)
主引用文献Inhibition of soluble epoxide hydrolase by fulvestrant and sulfoxides.
Bioorg.Med.Chem.Lett., 23, 2013
8K6Z
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BU of 8k6z by Molmil
NMR structure of human leptin
分子名称: Leptin
著者Fan, X, Qin, R, Yuan, W, Fan, J, Huang, W, Lin, Z.
登録日2023-07-26
公開日2024-02-07
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献The solution structure of human leptin reveals a conformational plasticity important for receptor recognition.
Structure, 32, 2024
4RED
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BU of 4red by Molmil
Crystal structure of human AMPK alpha1 KD-AID with K43A mutation
分子名称: 5'-AMP-activated protein kinase catalytic subunit alpha-1
著者Zhou, X.E, Ke, J, Li, X, Wang, L, Gu, X, de Waal, P.W, Tan, M.H.E, Wang, D, Wu, D, Xu, H.E, Melcher, K.
登録日2014-09-22
公開日2014-12-10
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.95 Å)
主引用文献Structural basis of AMPK regulation by adenine nucleotides and glycogen.
Cell Res., 25, 2015
7OTI
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Structure of ABCB1/P-glycoprotein in apo state
分子名称: Multidrug resistance protein 1A
著者Ford, R.C, Barbieri, A, Thonghin, N, Shafi, T, Prince, S.M, Collins, R.F.
登録日2021-06-10
公開日2021-12-08
最終更新日2024-07-17
実験手法ELECTRON MICROSCOPY (4.2 Å)
主引用文献Structure of ABCB1/P-Glycoprotein in the Presence of the CFTR Potentiator Ivacaftor.
Membranes (Basel), 11, 2021
5MX5
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BU of 5mx5 by Molmil
Mouse PA28alpha-beta
分子名称: PHOSPHATE ION, Proteasome activator complex subunit 1, Proteasome activator complex subunit 2
著者Huber, E.M, Groll, M.
登録日2017-01-20
公開日2017-09-13
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献The Mammalian Proteasome Activator PA28 Forms an Asymmetric alpha 4 beta 3 Complex.
Structure, 25, 2017
7OTG
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Structure of ABCB1/P-glycoprotein in the presence of the CFTR potentiator ivacaftor
分子名称: Multidrug resistance protein 1A, N-(2,4-di-tert-butyl-5-hydroxyphenyl)-4-oxo-1,4-dihydroquinoline-3-carboxamide
著者Ford, R.C, Barbieri, A, Thonghin, N, Shafi, T, Prince, S.M, Collins, R.F.
登録日2021-06-10
公開日2021-12-08
最終更新日2024-07-17
実験手法ELECTRON MICROSCOPY (5.4 Å)
主引用文献Structure of ABCB1/P-Glycoprotein in the Presence of the CFTR Potentiator Ivacaftor.
Membranes (Basel), 11, 2021
4JQ7
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Crystal structure of EGFR kinase domain in complex with compound 2a
分子名称: (2S)-2-[(5,6-diphenylfuro[2,3-d]pyrimidin-4-yl)amino]-2-phenylethanol, Epidermal growth factor receptor
著者Peng, Y.H, Wu, J.S.
登録日2013-03-20
公開日2013-06-19
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.73 Å)
主引用文献Protein Kinase Inhibitor Design by Targeting the Asp-Phe-Gly (DFG) Motif: The Role of the DFG Motif in the Design of Epidermal Growth Factor Receptor Inhibitors
J.Med.Chem., 56, 2013
4JXS
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BU of 4jxs by Molmil
X-ray crystal structure of AmpC beta-lactamase from E. coli in complex with a non-covalent inhibitor 3-[(4-CARBOXYBENZYL)SULFAMOYL]THIOPHENE-2-CARBOXYLIC ACID (compound 4)
分子名称: 3-[(4-carboxybenzyl)sulfamoyl]thiophene-2-carboxylic acid, Beta-lactamase, PHOSPHATE ION
著者Powers, R.A, Hendershot, J.M.
登録日2013-03-28
公開日2014-05-07
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Structure-based efforts to optimize a non-beta-lactam inhibitor of AmpC beta-lactamase.
Bioorg.Med.Chem., 22, 2014
4NQX
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BU of 4nqx by Molmil
Crystal Structure of HLA A*0101 in complex with NP44-S7N, an 9-mer influenza epitope
分子名称: Beta-2-microglobulin, HLA class I histocompatibility antigen, A-1 alpha chain, ...
著者Rossjohn, J, Gras, S.
登録日2013-11-26
公開日2013-12-25
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Preexisting CD8+ T-cell immunity to the H7N9 influenza A virus varies across ethnicities.
Proc.Natl.Acad.Sci.USA, 111, 2014
4LUS
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BU of 4lus by Molmil
alanine racemase [Clostridium difficile 630]
分子名称: 3,3',3''-phosphanetriyltripropanoic acid, Alanine racemase, GLYCEROL
著者Asojo, O.A.
登録日2013-07-25
公開日2014-06-04
最終更新日2023-12-06
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Structural and biochemical analyses of alanine racemase from the multidrug-resistant Clostridium difficile strain 630.
Acta Crystallogr.,Sect.D, 70, 2014
4LZJ
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BU of 4lzj by Molmil
Crystal Structure of MurQ from H.influenzae with bound inhibitor
分子名称: 2-(acetylamino)-3-O-[(1R)-1-carboxyethyl]-2-deoxy-6-O-phosphono-D-glucitol, N-acetylmuramic acid 6-phosphate etherase, PHOSPHATE ION
著者Hazra, S, Blanchard, J.
登録日2013-07-31
公開日2014-02-26
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.405 Å)
主引用文献Structure of MurNAc 6-phosphate hydrolase (MurQ) from Haemophilus influenzae with a bound inhibitor.
Biochemistry, 52, 2013
4QU6
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Crystal structure of a G-rich RNA sequence binding factor 1 (GRSF1) from Homo sapiens at 1.75 A resolution
分子名称: 1,2-ETHANEDIOL, CALCIUM ION, CHLORIDE ION, ...
著者Joint Center for Structural Genomics (JCSG), Partnership for T-Cell Biology (TCELL)
登録日2014-07-10
公開日2014-08-13
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献Crystal structure of a G-rich RNA sequence binding factor 1 (GRSF1) from Homo sapiens at 1.75 A resolution
To be published
4JRV
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BU of 4jrv by Molmil
Crystal structure of EGFR kinase domain in complex with compound 4c
分子名称: 4-(dimethylamino)-N-[3-(4-{[(1S)-2-hydroxy-1-phenylethyl]amino}-6-phenylfuro[2,3-d]pyrimidin-5-yl)phenyl]butanamide, Epidermal growth factor receptor
著者Peng, Y.H, Wu, J.S.
登録日2013-03-22
公開日2013-06-19
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Protein Kinase Inhibitor Design by Targeting the Asp-Phe-Gly (DFG) Motif: The Role of the DFG Motif in the Design of Epidermal Growth Factor Receptor Inhibitors
J.Med.Chem., 56, 2013
4JMH
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BU of 4jmh by Molmil
Crystal structure of synthetic protein in complex with double pY peptide
分子名称: Clamp Shc1_pY239/240, SHC-transforming protein 1
著者Yasui, N, Smith, L, Koide, S.
登録日2013-03-14
公開日2014-04-23
最終更新日2023-12-06
実験手法X-RAY DIFFRACTION (2.408 Å)
主引用文献Directed network wiring identifies a key protein interaction in embryonic stem cell differentiation.
Mol.Cell, 54, 2014
4JLF
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BU of 4jlf by Molmil
Inhibitor resistant (R220A) substitution in the Mycobacterium tuberculosis beta-lactamase
分子名称: Beta-lactamase, PHOSPHATE ION
著者Hazra, S, Kurz, S, Blanchard, J, Bonomo, R.
登録日2013-03-12
公開日2013-10-30
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Can inhibitor-resistant substitutions in the Mycobacterium tuberculosis beta-Lactamase BlaC lead to clavulanate resistance?: a biochemical rationale for the use of beta-lactam-beta-lactamase inhibitor combinations.
Antimicrob.Agents Chemother., 57, 2013
4NP7
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BU of 4np7 by Molmil
Structure of phosphotriesterase mutant (S308L/Y309A) from Agrobacterium radiobacter with diethyl thiophosphate bound in the active site
分子名称: 1,2-ETHANEDIOL, COBALT (II) ION, FE (II) ION, ...
著者Jackson, C.J, Carr, P.D, Sugrue, E.
登録日2013-11-20
公開日2014-09-24
最終更新日2023-12-06
実験手法X-RAY DIFFRACTION (1.99 Å)
主引用文献A 5000-fold increase in the specificity of a bacterial phosphotriesterase for malathion through combinatorial active site mutagenesis
Plos One, 9, 2014
4JGG
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Crystal Structure of TesA
分子名称: Esterase TesA
著者Kovacic, F, Granzin, J, Batra-Safferling, R, Jaeger, K.-E.
登録日2013-03-01
公開日2013-08-14
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Structural and Functional Characterisation of TesA - A Novel Lysophospholipase A from Pseudomonas aeruginosa.
Plos One, 8, 2013
4JK5
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Human urokinase-type Plasminogen Activator (uPA) in complex with a bicyclic peptide inhibitor (UK18-D-Ser)
分子名称: 1,3,5-tris(bromomethyl)benzene, CHLORIDE ION, HEXAETHYLENE GLYCOL, ...
著者Buth, S.A, Leiman, P.G, Chen, S, Heinis, C.
登録日2013-03-09
公開日2013-07-17
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.55 Å)
主引用文献Improving binding affinity and stability of Peptide ligands by substituting glycines with d-amino acids.
Chembiochem, 14, 2013
4OIC
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Crystal structrual of a soluble protein
分子名称: (2Z,4E)-5-[(1S)-1-hydroxy-2,6,6-trimethyl-4-oxocyclohex-2-en-1-yl]-3-methylpenta-2,4-dienoic acid, Bet v I allergen-like, CHLORIDE ION, ...
著者He, Y, Hao, Q, Li, W, Yan, C, Yan, N, Yin, P.
登録日2014-01-19
公開日2015-01-21
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.999 Å)
主引用文献Identification and characterization of ABA receptors in Oryza sativa
Plos One, 9, 2014
4OLG
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Crystal structure of AmpC beta-lactamase in complex with covalently bound N-formyl 7-aminocephalosporanic acid
分子名称: (2R,5Z)-5-[(acetyloxy)methylidene]-2-[(1R)-1-(formylamino)-2-oxoethyl]-5,6-dihydro-2H-1,3-thiazine-4-carboxylic acid, Beta-lactamase, PHOSPHATE ION
著者Shoichet, B.K, Barelier, S.
登録日2014-01-23
公開日2014-05-28
最終更新日2014-06-18
実験手法X-RAY DIFFRACTION (1.71 Å)
主引用文献Substrate deconstruction and the nonadditivity of enzyme recognition.
J.Am.Chem.Soc., 136, 2014
4OM1
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Crystal structure of antibody VRC07-I30Q, G54W, S58N in complex with clade A/E 93TH057 HIV-1 gp120 core
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Antigen binding fragment of heavy chain: Antibody VRC01, Antigen binding fragment of light chain: Antibody VRC01, ...
著者Kwon, Y.D, Kwong, P.D.
登録日2014-01-25
公開日2014-09-03
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.131 Å)
主引用文献Enhanced Potency of a Broadly Neutralizing HIV-1 Antibody In Vitro Improves Protection against Lentiviral Infection In Vivo.
J.Virol., 88, 2014

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