Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

3TM1
DownloadVisualize
BU of 3tm1 by Molmil
Crystal structure of mature ThnT, a pantetheine hydrolase
分子名称: GLYCEROL, cysteine transferase
著者Schildbach, J.F, Wright, N.T, Buller, A.R.
登録日2011-08-30
公開日2012-07-04
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Autoproteolytic Activation of ThnT Results in Structural Reorganization Necessary for Substrate Binding and Catalysis.
J.Mol.Biol., 422, 2012
3U3H
DownloadVisualize
BU of 3u3h by Molmil
X-Ray Crystallographic Analysis of D-Xylose Isomerase-Catalyzed Isomerization of (R)-Glyceraldehyde
分子名称: (2R)-propane-1,1,2,3-tetrol, (4R)-2-METHYLPENTANE-2,4-DIOL, FORMIC ACID, ...
著者Allen, K.N, Silvaggi, N.R, Toteva, M.M, Richard, J.P.
登録日2011-10-05
公開日2011-10-26
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (0.97 Å)
主引用文献Binding Energy and Catalysis by d-Xylose Isomerase: Kinetic, Product, and X-ray Crystallographic Analysis of Enzyme-Catalyzed Isomerization of (R)-Glyceraldehyde.
Biochemistry, 50, 2011
6QCD
DownloadVisualize
BU of 6qcd by Molmil
Human Sirt6 in complex with ADP-ribose and the activator quercetin
分子名称: 1,2-ETHANEDIOL, 3,5,7,3',4'-PENTAHYDROXYFLAVONE, NAD-dependent protein deacetylase sirtuin-6, ...
著者You, W, Steegborn, C.
登録日2018-12-27
公開日2019-12-25
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.84 Å)
主引用文献Structural basis for the activation and inhibition of Sirtuin 6 by quercetin and its derivatives.
Sci Rep, 9, 2019
6ZL4
DownloadVisualize
BU of 6zl4 by Molmil
the structure of glutamate transporter homologue GltTk in complex with the photo switchable compound (cis)
分子名称: (2~{S},3~{S})-2-azanyl-3-[[4-[2-(4-methoxyphenyl)hydrazinyl]phenyl]methoxy]butanedioic acid, DECYL-BETA-D-MALTOPYRANOSIDE, DI(HYDROXYETHYL)ETHER, ...
著者Arkhipova, V, Slotboom, D.J, Guskov, A.
登録日2020-06-30
公開日2021-01-27
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Structural Aspects of Photopharmacology: Insight into the Binding of Photoswitchable and Photocaged Inhibitors to the Glutamate Transporter Homologue.
J.Am.Chem.Soc., 143, 2021
7QI3
DownloadVisualize
BU of 7qi3 by Molmil
Structure of Fusarium verticillioides NAT1 (FDB2) N-malonyltransferase
分子名称: 1,2-ETHANEDIOL, Arylamine N-acetyltransferase, DI(HYDROXYETHYL)ETHER, ...
著者Lowe, E.D, Kotomina, E, Karagianni, E, Boukouvala, S.
登録日2021-12-14
公開日2022-11-23
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Fusarium verticillioides NAT1 (FDB2) N-malonyltransferase is structurally, functionally and phylogenetically distinct from its N-acetyltransferase (NAT) homologues.
Febs J., 290, 2023
6TMY
DownloadVisualize
BU of 6tmy by Molmil
Crystal structure of isoform CBd of the basic phospholipase A2 subunit of crotoxin from Crotalus durissus terrificus
分子名称: CHLORIDE ION, Phospholipase A2 crotoxin basic subunit CBc, SODIUM ION, ...
著者Nemecz, D, Ostrowski, M, Saul, F.A, Faure, G.
登録日2019-12-05
公開日2020-12-02
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Crystal Structure of Isoform CBd of the Basic Phospholipase A 2 Subunit of Crotoxin: Description of the Structural Framework of CB for Interaction with Protein Targets.
Molecules, 25, 2020
5VPY
DownloadVisualize
BU of 5vpy by Molmil
Crystal structure of human KRAS G12A mutant in complex with GppNHp
分子名称: 2-amino-9-{5-O-[(S)-hydroxy{[(R)-hydroxy(phosphonoamino)phosphoryl]oxy}phosphoryl]-alpha-L-xylofuranosyl}-1,9-dihydro-6H-purin-6-one, GTPase KRas, MAGNESIUM ION, ...
著者Xu, S, Long, B, Boris, G, Ni, S, Kennedy, M.A.
登録日2017-05-06
公開日2017-12-06
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structural insight into the rearrangement of the switch I region in GTP-bound G12A K-Ras.
Acta Crystallogr D Struct Biol, 73, 2017
5VXO
DownloadVisualize
BU of 5vxo by Molmil
Crystal Structure Analysis of human CLYBL in complex with propionyl-CoA
分子名称: 1,2-ETHANEDIOL, Citrate lyase subunit beta-like protein, mitochondrial, ...
著者Shen, H.
登録日2017-05-23
公開日2017-11-01
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.266 Å)
主引用文献The Human Knockout Gene CLYBL Connects Itaconate to Vitamin B12.
Cell, 171, 2017
5VR4
DownloadVisualize
BU of 5vr4 by Molmil
RNA octamer containing 2'-F-4'-OMe U.
分子名称: COBALT TETRAAMMINE ION, RNA (5'-R(*CP*GP*AP*AP*(UMO)P*UP*CP*G)-3')
著者Harp, J.M, Egli, M.
登録日2017-05-10
公開日2017-10-04
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献4'-C-Methoxy-2'-deoxy-2'-fluoro Modified Ribonucleotides Improve Metabolic Stability and Elicit Efficient RNAi-Mediated Gene Silencing.
J. Am. Chem. Soc., 139, 2017
6ZIS
DownloadVisualize
BU of 6zis by Molmil
Crystal structure of a CGRP receptor ectodomain heterodimer with bound high affinity inhibitor
分子名称: Maltose/maltodextrin-binding periplasmic protein,Receptor activity-modifying protein 1,Calcitonin gene-related peptide type 1 receptor, N-{(1S)-5-amino-1-[(4-pyridin-4-ylpiperazin-1-yl)carbonyl]pentyl}-3,5-dibromo-Nalpha-{[4-(2-oxo-1,4-dihydroquinazolin-3 (2H)-yl)piperidin-1-yl]carbonyl}-D-tyrosinamide, TETRAETHYLENE GLYCOL, ...
著者Southall, S.M.
登録日2020-06-26
公開日2020-07-15
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.73 Å)
主引用文献Structure-Based Drug Discovery ofN-((R)-3-(7-Methyl-1H-indazol-5-yl)-1-oxo-1-(((S)-1-oxo-3-(piperidin-4-yl)-1-(4-(pyridin-4-yl)piperazin-1-yl)propan-2-yl)amino)propan-2-yl)-2'-oxo-1',2'-dihydrospiro[piperidine-4,4'-pyrido[2,3-d][1,3]oxazine]-1-carboxamide (HTL22562): A Calcitonin Gene-Related Peptide Receptor Antagonist for Acute Treatment of Migraine.
J.Med.Chem., 63, 2020
5VDV
DownloadVisualize
BU of 5vdv by Molmil
Human cyclic GMP-AMP synthase (cGAS) in complex with Compound F3
分子名称: Cyclic GMP-AMP synthase, SULFATE ION, ZINC ION, ...
著者Byrnes, L.J, Hall, J.D.
登録日2017-04-03
公開日2017-09-27
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.998 Å)
主引用文献The catalytic mechanism of cyclic GMP-AMP synthase (cGAS) and implications for innate immunity and inhibition.
Protein Sci., 26, 2017
6Q4R
DownloadVisualize
BU of 6q4r by Molmil
High-resolution crystal structure of ERAP1 with bound phosphinic transition-state analogue inhibitor
分子名称: 1,2-ETHANEDIOL, 2-[3-(2-HYDROXY-1,1-DIHYDROXYMETHYL-ETHYLAMINO)-PROPYLAMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Giastas, P, Neu, M, Rowland, P, Stratikos, E.
登録日2018-12-06
公開日2019-04-10
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献High-Resolution Crystal Structure of Endoplasmic Reticulum Aminopeptidase 1 with Bound Phosphinic Transition-State Analogue Inhibitor.
Acs Med.Chem.Lett., 10, 2019
5VHD
DownloadVisualize
BU of 5vhd by Molmil
DHX36 with an N-terminal truncation bound to ADP-AlF4
分子名称: ADENOSINE-5'-DIPHOSPHATE, DEAH (Asp-Glu-Ala-His) box polypeptide 36, TETRAFLUOROALUMINATE ION
著者Chen, M, Ferre-D'Amare, A.
登録日2017-04-13
公開日2018-06-13
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2.55 Å)
主引用文献Structural basis of G-quadruplex unfolding by the DEAH/RHA helicase DHX36.
Nature, 558, 2018
7QJR
DownloadVisualize
BU of 7qjr by Molmil
Crystal structure of cutinase 1 from Thermobifida fusca DSM44342 (703)
分子名称: Cutinase 1, TETRAETHYLENE GLYCOL
著者Zahn, M, Avilan, L, Beckham, G.T, McGeehan, J.E.
登録日2021-12-17
公開日2022-12-28
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.51 Å)
主引用文献Sourcing thermotolerant poly(ethylene terephthalate) hydrolase scaffolds from natural diversity
Nat Commun, 13, 2022
7QKB
DownloadVisualize
BU of 7qkb by Molmil
Crystal structure of human Cathepsin L in complex with covalently bound GC376
分子名称: CHLORIDE ION, Cathepsin L, DI(HYDROXYETHYL)ETHER, ...
著者Reinke, P.Y.A, Falke, S, Lieske, J, Ewert, W, Loboda, J, Rahmani Mashhour, A, Hauser, M, Karnicar, K, Usenik, A, Lindic, N, Lach, M, Boehler, H, Beck, T, Cox, R, Chapman, H.N, Hinrichs, W, Turk, D, Guenther, S, Meents, A.
登録日2021-12-17
公開日2022-12-28
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Calpeptin is a potent cathepsin inhibitor and drug candidate for SARS-CoV-2 infections.
Commun Biol, 6, 2023
3H3R
DownloadVisualize
BU of 3h3r by Molmil
Crystal structure of the CERT START domain in complex with HPA-14
分子名称: Goodpasture antigen binding protein, N-[(1R,3R)-3-hydroxy-1-(hydroxymethyl)-3-phenylpropyl]tetradecanamide
著者Kudo, N, Wakatsuki, S, Kato, R.
登録日2009-04-17
公開日2010-03-02
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Crystal structures of the CERT START domain with inhibitors provide insights into the mechanism of ceramide transfer.
J.Mol.Biol., 396, 2010
5VMK
DownloadVisualize
BU of 5vmk by Molmil
Crystal structure of a bifunctional GlmU UDP-N-acetylglucosamine diphosphorylase/glucosamine-1- phosphate N-acetyltransferase from Acinetobacter baumannii
分子名称: Bifunctional protein GlmU, CITRIC ACID, PHOSPHATE ION, ...
著者Seattle Structural Genomics Center for Infectious Disease (SSGCID)
登録日2017-04-27
公開日2017-05-24
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.55 Å)
主引用文献Crystal structure of a bifunctional GlmU UDP-N-acetylglucosamine diphosphorylase/glucosamine-1- phosphate N-acetyltransferase from Acinetobacter baumannii
To Be Published
7QJT
DownloadVisualize
BU of 7qjt by Molmil
Crystal structure of a cutinase enzyme from Thermobifida cellulosilytica TB100 (711)
分子名称: GLYCEROL, MAGNESIUM ION, TETRAETHYLENE GLYCOL, ...
著者Zahn, M, Shakespeare, T.J, Beckham, G.T, McGeehan, J.E.
登録日2021-12-17
公開日2022-12-28
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.78 Å)
主引用文献Sourcing thermotolerant poly(ethylene terephthalate) hydrolase scaffolds from natural diversity
Nat Commun, 13, 2022
3H51
DownloadVisualize
BU of 3h51 by Molmil
Crystal structure of Putative calcium/calmodulin dependent protein kinase II association domain (NP_636218.1) from XANTHOMONAS CAMPESTRIS at 1.70 A resolution
分子名称: DI(HYDROXYETHYL)ETHER, Putative calcium/calmodulin dependent protein kinase II association domain, TETRAETHYLENE GLYCOL, ...
著者Joint Center for Structural Genomics (JCSG)
登録日2009-04-21
公開日2009-05-05
最終更新日2023-02-01
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Crystal structure of Putative calcium/calmodulin dependent protein kinase II association domain (NP_636218.1) from XANTHOMONAS CAMPESTRIS at 1.70 A resolution
To be published
7QJP
DownloadVisualize
BU of 7qjp by Molmil
Crystal structure of a cutinase enzyme from Saccharopolyspora flava (611)
分子名称: Cutinase, TETRAETHYLENE GLYCOL
著者Zahn, M, Avilan, L, Beckham, G.T, McGeehan, J.E.
登録日2021-12-17
公開日2022-12-28
最終更新日2024-04-24
実験手法X-RAY DIFFRACTION (1.561 Å)
主引用文献Sourcing thermotolerant poly(ethylene terephthalate) hydrolase scaffolds from natural diversity
Nat Commun, 13, 2022
7QJS
DownloadVisualize
BU of 7qjs by Molmil
Crystal structure of a cutinase enzyme from Thermobifida fusca YX (705)
分子名称: Cutinase 2, DI(HYDROXYETHYL)ETHER, GLYCEROL, ...
著者Zahn, M, Shakespeare, T.J, Beckham, G.T, McGeehan, J.E.
登録日2021-12-17
公開日2022-12-28
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.429 Å)
主引用文献Sourcing thermotolerant poly(ethylene terephthalate) hydrolase scaffolds from natural diversity
Nat Commun, 13, 2022
7QOX
DownloadVisualize
BU of 7qox by Molmil
Factor XI and Plasma Kallikrein apple domain structures reveals different kininogen bound complexes
分子名称: 1-(2-METHOXY-ETHOXY)-2-{2-[2-(2-METHOXY-ETHOXY]-ETHOXY}-ETHANE, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-{2-[2-(2-{2-[2-(2-ETHOXY-ETHOXY)-ETHOXY]-ETHOXY}-ETHOXY)-ETHOXY]-ETHOXY}-ETHANOL, ...
著者Li, C, Awital, B, Wong, S, Dreveny, I, Meijers, J, Emsley, J.
登録日2021-12-29
公開日2023-01-18
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2.32 Å)
主引用文献Plasma kallikrein structure reveals apple domain disc rotated conformation compared to factor XI.
J Thromb Haemost, 17, 2019
1M6E
DownloadVisualize
BU of 1m6e by Molmil
CRYSTAL STRUCTURE OF SALICYLIC ACID CARBOXYL METHYLTRANSFERASE (SAMT)
分子名称: 2-HYDROXYBENZOIC ACID, LUTETIUM (III) ION, S-ADENOSYL-L-HOMOCYSTEINE, ...
著者Zubieta, C, Ross, J.R, Koscheski, P, Yang, Y, Pichersky, E, Noel, J.P.
登録日2002-07-16
公開日2003-09-09
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Structural Basis for Substrate Recognition in The Salicylic Acid Carboxyl Methyltransferase Family
Plant Cell, 15, 2003
6ZHO
DownloadVisualize
BU of 6zho by Molmil
Crystal structure of a CGRP receptor ectodomain heterodimer with bound high affinity inhibitor
分子名称: Maltose/maltodextrin-binding periplasmic protein,Receptor activity-modifying protein 1,Calcitonin gene-related peptide type 1 receptor, TETRAETHYLENE GLYCOL, alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose, ...
著者Southall, S.M.
登録日2020-06-23
公開日2020-07-15
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Structure-Based Drug Discovery ofN-((R)-3-(7-Methyl-1H-indazol-5-yl)-1-oxo-1-(((S)-1-oxo-3-(piperidin-4-yl)-1-(4-(pyridin-4-yl)piperazin-1-yl)propan-2-yl)amino)propan-2-yl)-2'-oxo-1',2'-dihydrospiro[piperidine-4,4'-pyrido[2,3-d][1,3]oxazine]-1-carboxamide (HTL22562): A Calcitonin Gene-Related Peptide Receptor Antagonist for Acute Treatment of Migraine.
J.Med.Chem., 63, 2020
3H9P
DownloadVisualize
BU of 3h9p by Molmil
Crystal structure of putative triphosphoribosyl-dephospho-coA synthase from Archaeoglobus fulgidus
分子名称: CHLORIDE ION, GLYCEROL, TETRAETHYLENE GLYCOL, ...
著者Chang, C, Wu, R, Gu, M, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
登録日2009-04-30
公開日2009-05-19
最終更新日2017-11-01
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Crystal structure of putative triphosphoribosyl-dephospho-coA synthase from Archaeoglobus fulgidus
To be Published

222415

件を2024-07-10に公開中

PDB statisticsPDBj update infoContact PDBjnumon