Loading
PDBj
メニューPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help

7YYH
DownloadVisualize
BU of 7yyh by Molmil
Structure of the human CCANdeltaT CENP-A alpha-satellite complex
分子名称: Centromere protein C, Centromere protein H, Centromere protein I, ...
著者Yatskevich, S, Muir, K.W, Bellini, D, Zhang, Z, Yang, J, Tischer, T, Predin, M, Dendooven, T, McLaughlin, S.H, Barford, D.
登録日2022-02-17
公開日2022-05-18
最終更新日2024-07-17
実験手法ELECTRON MICROSCOPY (8.9 Å)
主引用文献Structure of the human inner kinetochore bound to a centromeric CENP-A nucleosome.
Science, 376, 2022
7YI1
DownloadVisualize
BU of 7yi1 by Molmil
Cryo-EM structure of Eaf3 CHD bound to H3K36me3 nucleosome
分子名称: Chromatin modification-related protein EAF3, Histone H2A, Histone H2B 1.1, ...
著者Li, H.T, Yan, C.Y, Guan, H.P, Wang, P.
登録日2022-07-14
公開日2023-06-14
最終更新日2025-07-02
実験手法ELECTRON MICROSCOPY (2.8 Å)
主引用文献Diverse modes of H3K36me3-guided nucleosomal deacetylation by Rpd3S.
Nature, 620, 2023
7YI5
DownloadVisualize
BU of 7yi5 by Molmil
Cryo-EM structure of Rpd3S complex bound to H3K36me3 nucleosome in loose state
分子名称: Chromatin modification-related protein EAF3, Histone H2A, Histone H2B 1.1, ...
著者Li, H.T, Yan, C.Y, Guan, H.P, Wang, P.
登録日2022-07-14
公開日2023-06-14
最終更新日2025-07-02
実験手法ELECTRON MICROSCOPY (3.96 Å)
主引用文献Diverse modes of H3K36me3-guided nucleosomal deacetylation by Rpd3S.
Nature, 620, 2023
7YI4
DownloadVisualize
BU of 7yi4 by Molmil
Cryo-EM structure of Rpd3S complex bound to H3K36me3 nucleosome in close state
分子名称: Chromatin modification-related protein EAF3, Histone H2A, Histone H2B 1.1, ...
著者Li, H.T, Yan, C.Y, Guan, H.P, Wang, P.
登録日2022-07-14
公開日2023-06-14
最終更新日2025-07-02
実験手法ELECTRON MICROSCOPY (3.96 Å)
主引用文献Diverse modes of H3K36me3-guided nucleosomal deacetylation by Rpd3S.
Nature, 620, 2023
7YRG
DownloadVisualize
BU of 7yrg by Molmil
histone methyltransferase
分子名称: DNA (146-MER), Histone H2A.Z, Histone H2B 1.1, ...
著者Li, H, Wang, W.Y.
登録日2022-08-09
公開日2023-12-13
最終更新日2025-06-18
実験手法ELECTRON MICROSCOPY (4.2 Å)
主引用文献Structural insight into H4K20 methylation on H2A.Z-nucleosome by SUV420H1.
Mol.Cell, 83, 2023
7YBF
DownloadVisualize
BU of 7ybf by Molmil
Crystal structure of inner membrane protein Sad1 in complex with histone H2A-H2B
分子名称: Histone H2B-alpha,Histone H2A-beta, Spindle pole body-associated protein sad1
著者Sun, W, Hu, C, Chen, Y.
登録日2022-06-29
公開日2024-01-03
最終更新日2024-07-17
実験手法X-RAY DIFFRACTION (2.15 Å)
主引用文献The SUN-family protein Sad1 mediates heterochromatin spatial organization through interaction with histone H2A-H2B.
Nat Commun, 15, 2024
7XYF
DownloadVisualize
BU of 7xyf by Molmil
Cryo-EM structure of Fft3-nucleosome complex with Fft3 bound to SHL+2 position of the nucleosome
分子名称: ATP-dependent helicase fft3, DNA (167-MER), Histone H2A, ...
著者Nan, Z, Tao, J, Yangao, H.
登録日2022-06-01
公開日2023-12-06
最終更新日2024-10-16
実験手法ELECTRON MICROSCOPY (3.8 Å)
主引用文献Cryo-EM structure of Fft3-nucleosome complex with Fft3 bound to SHL+2 position of the nucleosome (Class I Fft3-nucleosome complex)
To Be Published
7XYG
DownloadVisualize
BU of 7xyg by Molmil
Cryo-EM structure of Fft3-nucleosome complex with Fft3 bound to SHL+3 position of the nucleosome
分子名称: ATP-dependent helicase fft3, DNA (167-MER), Histone H2A, ...
著者Nan, Z, Tao, J, Yangao, H.
登録日2022-06-01
公開日2023-12-06
最終更新日2024-06-12
実験手法ELECTRON MICROSCOPY (4.2 Å)
主引用文献Cryo-EM structure of Fft3-nucleosome complex with Fft3 bound to SHL+3 position of the nucleosome (Class II Fft3-nucleosome complex)
To Be Published
7Y61
DownloadVisualize
BU of 7y61 by Molmil
Cryo-EM structure of the two CAF1LCs bound right-handed Di-tetrasome
分子名称: Chromatin assembly factor 1 subunit A, Chromatin assembly factor 1 subunit B, Histone H3.1, ...
著者Liu, C.P, Yu, Z.Y, Yu, C, Xu, R.M.
登録日2022-06-18
公開日2023-08-16
最終更新日2023-09-06
実験手法ELECTRON MICROSCOPY (5.6 Å)
主引用文献Structural insights into histone binding and nucleosome assembly by chromatin assembly factor-1.
Science, 381, 2023
7Y5V
DownloadVisualize
BU of 7y5v by Molmil
Cryo-EM structure of the dimeric human CAF1LC-H3-H4 complex
分子名称: Chromatin assembly factor 1 subunit A, Chromatin assembly factor 1 subunit B, Histone H3.1, ...
著者Liu, C.P, Yu, C, Yu, Z.Y, Xu, R.M.
登録日2022-06-17
公開日2023-08-16
最終更新日2023-09-06
実験手法ELECTRON MICROSCOPY (6.1 Å)
主引用文献Structural insights into histone binding and nucleosome assembly by chromatin assembly factor-1.
Science, 381, 2023
7Y60
DownloadVisualize
BU of 7y60 by Molmil
Cryo-EM structure of human CAF1LC bound right-handed Di-tetrasome
分子名称: Chromatin assembly factor 1 subunit A, Chromatin assembly factor 1 subunit B, Histone H3.1, ...
著者Liu, C.P, Yu, C, Yu, Z.Y, Xu, R.M.
登録日2022-06-18
公開日2023-08-16
最終更新日2023-09-06
実験手法ELECTRON MICROSCOPY (3.8 Å)
主引用文献Structural insights into histone binding and nucleosome assembly by chromatin assembly factor-1.
Science, 381, 2023
7Y5W
DownloadVisualize
BU of 7y5w by Molmil
Cryo-EM structure of the left-handed Di-tetrasome
分子名称: Histone H3.1, Histone H4, Widom 601 DNA (147-MER)
著者Liu, C.P, Yu, Z.Y, Yu, C, Xu, R.M.
登録日2022-06-17
公開日2023-08-16
最終更新日2023-09-06
実験手法ELECTRON MICROSCOPY (3.5 Å)
主引用文献Structural insights into histone binding and nucleosome assembly by chromatin assembly factor-1.
Science, 381, 2023
7Y5U
DownloadVisualize
BU of 7y5u by Molmil
Cryo-EM structure of the monomeric human CAF1LC-H3-H4 complex
分子名称: Chromatin assembly factor 1 subunit A, Chromatin assembly factor 1 subunit B, Histone H3.1, ...
著者Liu, C.P, Yu, Z.Y, Yu, C, Xu, R.M.
登録日2022-06-17
公開日2023-08-16
最終更新日2023-09-06
実験手法ELECTRON MICROSCOPY (3.8 Å)
主引用文献Structural insights into histone binding and nucleosome assembly by chromatin assembly factor-1.
Science, 381, 2023
7XFJ
DownloadVisualize
BU of 7xfj by Molmil
Structure of nucleosome-AAG complex (T-50I, post-catalytic state)
分子名称: DNA (152-MER), DNA-3-methyladenine glycosylase, Histone H2A type 1, ...
著者Zheng, L, Tsai, B, Gao, N.
登録日2022-04-01
公開日2023-11-08
最終更新日2025-07-02
実験手法ELECTRON MICROSCOPY (3 Å)
主引用文献Structural and mechanistic insights into the DNA glycosylase AAG-mediated base excision in nucleosome.
Cell Discov, 9, 2023
7Y00
DownloadVisualize
BU of 7y00 by Molmil
Cryo-EM structure of the nucleosome containing 169 base-pair DNA with a p53 target sequence
分子名称: DNA (169-MER), Histone H2A type 1-B/E, Histone H2B type 1-J, ...
著者Nishimura, M, Nozawa, K, Takizawa, Y, Kurumizaka, H.
登録日2022-06-03
公開日2022-10-19
最終更新日2024-07-03
実験手法ELECTRON MICROSCOPY (3.96 Å)
主引用文献Structural basis for p53 binding to its nucleosomal target DNA sequence.
Pnas Nexus, 1, 2022
7XZY
DownloadVisualize
BU of 7xzy by Molmil
Cryo-EM structure of the nucleosome containing 193 base-pair DNA with a p53 target sequence
分子名称: DNA (193-MER), Histone H2A type 1-B/E, Histone H2B type 1-J, ...
著者Nishimura, M, Nozawa, K, Takizawa, Y, Kurumizaka, H.
登録日2022-06-03
公開日2022-10-19
最終更新日2024-07-03
実験手法ELECTRON MICROSCOPY (3.97 Å)
主引用文献Structural basis for p53 binding to its nucleosomal target DNA sequence.
Pnas Nexus, 1, 2022
7XT7
DownloadVisualize
BU of 7xt7 by Molmil
RNA polymerase II elongation complex transcribing a nucleosome (EC49B)
分子名称: Component of the Paf1p complex, Constituent of Paf1 complex with RNA polymerase II, Paf1p, ...
著者Ehara, H, Kujirai, T, Shirouzu, M, Kurumizaka, H, Sekine, S.
登録日2022-05-16
公開日2022-10-12
最終更新日2024-07-03
実験手法ELECTRON MICROSCOPY (4.2 Å)
主引用文献Structural basis of nucleosome disassembly and reassembly by RNAPII elongation complex with FACT.
Science, 377, 2022
7XTI
DownloadVisualize
BU of 7xti by Molmil
RNA polymerase II elongation complex transcribing a nucleosome (EC58hex)
分子名称: Component of the Paf1p complex, Constituent of Paf1 complex with RNA polymerase II, Paf1p, ...
著者Ehara, H, Kujirai, T, Shirouzu, M, Kurumizaka, H, Sekine, S.
登録日2022-05-17
公開日2022-10-12
最終更新日2024-07-03
実験手法ELECTRON MICROSCOPY (3.9 Å)
主引用文献Structural basis of nucleosome disassembly and reassembly by RNAPII elongation complex with FACT.
Science, 377, 2022
7XZZ
DownloadVisualize
BU of 7xzz by Molmil
Cryo-EM structure of the nucleosome in complex with p53
分子名称: Cellular tumor antigen p53, DNA (169-MER), Histone H2A type 1-B/E, ...
著者Nishimura, M, Nozawa, K, Takizawa, Y, Kurumizaka, H.
登録日2022-06-03
公開日2022-10-12
最終更新日2024-07-03
実験手法ELECTRON MICROSCOPY (4.07 Å)
主引用文献Structural basis for p53 binding to its nucleosomal target DNA sequence.
Pnas Nexus, 1, 2022
7ZS9
DownloadVisualize
BU of 7zs9 by Molmil
Yeast RNA polymerase II transcription pre-initiation complex with the +1 nucleosome (complex A)
分子名称: DNA-directed RNA polymerase II subunit RPB1, DNA-directed RNA polymerase II subunit RPB11, DNA-directed RNA polymerase II subunit RPB2, ...
著者Wang, H, Cramer, P.
登録日2022-05-06
公開日2022-11-16
最終更新日2025-07-09
実験手法ELECTRON MICROSCOPY (3.1 Å)
主引用文献Structures of transcription preinitiation complex engaged with the +1 nucleosome.
Nat.Struct.Mol.Biol., 30, 2023
7XFL
DownloadVisualize
BU of 7xfl by Molmil
Structure of nucleosome-AAG complex (A-53I, free state)
分子名称: DNA (152-MER), Histone H2A type 1, Histone H2B 1.1, ...
著者Zheng, L, Tsai, B, Gao, N.
登録日2022-04-01
公開日2023-04-19
最終更新日2025-07-02
実験手法ELECTRON MICROSCOPY (2.8 Å)
主引用文献Structural and mechanistic insights into the DNA glycosylase AAG-mediated base excision in nucleosome.
Cell Discov, 9, 2023
7XZX
DownloadVisualize
BU of 7xzx by Molmil
Cryo-EM structure of the nucleosome in complex with p53 DNA-binding domain
分子名称: Cellular tumor antigen p53, DNA (193-MER), Histone H2A type 1-B/E, ...
著者Nishimura, M, Nozawa, K, Takizawa, Y, Kurumizaka, H.
登録日2022-06-03
公開日2022-10-12
最終更新日2024-07-03
実験手法ELECTRON MICROSCOPY (4.53 Å)
主引用文献Structural basis for p53 binding to its nucleosomal target DNA sequence.
Pnas Nexus, 1, 2022
8AAG
DownloadVisualize
BU of 8aag by Molmil
H1-bound palindromic nucleosome, state 1
分子名称: DNA/RNA (185-MER), Histone H1.0-B, Histone H2A type 1, ...
著者Alegrio Louro, J, Beinsteiner, B, Cheng, T.C, Patel, A.K.M, Boopathi, R, Angelov, D, Hamiche, A, Bednar, J, Kale, S, Dimitrov, S, Klaholz, B.
登録日2022-07-01
公開日2022-12-14
最終更新日2024-07-24
実験手法ELECTRON MICROSCOPY (10 Å)
主引用文献Nucleosome dyad determines the H1 C-terminus collapse on distinct DNA arms.
Structure, 31, 2023
7YOZ
DownloadVisualize
BU of 7yoz by Molmil
Cryo-EM structure of human subnucleosome (intermediate form)
分子名称: Histone H3.1, Histone H4, Widom601 DNA FW (145-MER), ...
著者Nozawa, K, Takizawa, Y, Kurumizaka, H.
登録日2022-08-02
公開日2022-11-16
最終更新日2025-07-02
実験手法ELECTRON MICROSCOPY (4.3 Å)
主引用文献Cryo-electron microscopy structure of the H3-H4 octasome: A nucleosome-like particle without histones H2A and H2B.
Proc.Natl.Acad.Sci.USA, 119, 2022
8U5H
DownloadVisualize
BU of 8u5h by Molmil
Cryo-EM structure of human DNMT3A UDR bound to H2AK119ub1-modified nucleosome
分子名称: DNA (cytosine-5)-methyltransferase 3A, Histone H2A, Histone H2B 1.1, ...
著者Chen, X, Song, J.
登録日2023-09-12
公開日2024-06-12
最終更新日2025-05-21
実験手法ELECTRON MICROSCOPY (3.23 Å)
主引用文献Structural basis for the H2AK119ub1-specific DNMT3A-nucleosome interaction.
Nat Commun, 15, 2024

238582

件を2025-07-09に公開中

PDB statisticsPDBj update infoContact PDBjnumon