Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

7AJC
DownloadVisualize
BU of 7ajc by Molmil
bovine ATP synthase dimer state1:state2
分子名称: 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE, ATP synthase F(0) complex subunit B1, mitochondrial, ...
著者Spikes, T.E, Montgomery, M.G, Walker, J.E.
登録日2020-09-29
公開日2021-02-03
最終更新日2021-02-24
実験手法ELECTRON MICROSCOPY (11.9 Å)
主引用文献Interface mobility between monomers in dimeric bovine ATP synthase participates in the ultrastructure of inner mitochondrial membranes.
Proc.Natl.Acad.Sci.USA, 118, 2021
7AJB
DownloadVisualize
BU of 7ajb by Molmil
bovine ATP synthase dimer state1:state1
分子名称: 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE, ATP synthase F(0) complex subunit B1, mitochondrial, ...
著者Spikes, T.E, Montgomery, M.G, Walker, J.E.
登録日2020-09-29
公開日2021-02-03
最終更新日2021-02-24
実験手法ELECTRON MICROSCOPY (9.2 Å)
主引用文献Interface mobility between monomers in dimeric bovine ATP synthase participates in the ultrastructure of inner mitochondrial membranes.
Proc.Natl.Acad.Sci.USA, 118, 2021
7AJI
DownloadVisualize
BU of 7aji by Molmil
bovine ATP synthase dimer state3:state2
分子名称: 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE, ATP synthase F(0) complex subunit B1, mitochondrial, ...
著者Spikes, T.E, Montgomery, M.G, Walker, J.E.
登録日2020-09-29
公開日2021-02-03
最終更新日2021-02-24
実験手法ELECTRON MICROSCOPY (11.4 Å)
主引用文献Interface mobility between monomers in dimeric bovine ATP synthase participates in the ultrastructure of inner mitochondrial membranes.
Proc.Natl.Acad.Sci.USA, 118, 2021
7AJE
DownloadVisualize
BU of 7aje by Molmil
bovine ATP synthase dimer state2:state1
分子名称: 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE, ATP synthase F(0) complex subunit B1, mitochondrial, ...
著者Spikes, T.E, Montgomery, M.G, Walker, J.E.
登録日2020-09-29
公開日2021-02-03
最終更新日2021-02-24
実験手法ELECTRON MICROSCOPY (9.4 Å)
主引用文献Interface mobility between monomers in dimeric bovine ATP synthase participates in the ultrastructure of inner mitochondrial membranes.
Proc.Natl.Acad.Sci.USA, 118, 2021
7AJG
DownloadVisualize
BU of 7ajg by Molmil
bovine ATP synthase dimer state2:state3
分子名称: 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE, ATP synthase F(0) complex subunit B1, mitochondrial, ...
著者Spikes, T.E, Montgomery, M.G, Walker, J.E.
登録日2020-09-29
公開日2021-02-03
最終更新日2021-02-24
実験手法ELECTRON MICROSCOPY (10.7 Å)
主引用文献Interface mobility between monomers in dimeric bovine ATP synthase participates in the ultrastructure of inner mitochondrial membranes.
Proc.Natl.Acad.Sci.USA, 118, 2021
7AJF
DownloadVisualize
BU of 7ajf by Molmil
bovine ATP synthase dimer state2:state2
分子名称: 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE, ATP synthase F(0) complex subunit B1, mitochondrial, ...
著者Spikes, T.E, Montgomery, M.G, Walker, J.E.
登録日2020-09-29
公開日2021-02-03
最終更新日2021-02-24
実験手法ELECTRON MICROSCOPY (8.45 Å)
主引用文献Interface mobility between monomers in dimeric bovine ATP synthase participates in the ultrastructure of inner mitochondrial membranes.
Proc.Natl.Acad.Sci.USA, 118, 2021
151D
DownloadVisualize
BU of 151d by Molmil
DIVERSITY OF WATER RING SIZE AT DNA INTERFACES: HYDRATION AND DYNAMICS OF DNA-ANTHRACYCLINE COMPLEXES
分子名称: DNA (5'-D(*CP*GP*AP*TP*CP*G)-3'), DOXORUBICIN
著者Lipscomb, L.A, Peek, M.E, Zhou, F.X, Bertrand, J.A, VanDerveer, D, Williams, L.D.
登録日1993-12-13
公開日1994-05-04
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献Water ring structure at DNA interfaces: hydration and dynamics of DNA-anthracycline complexes.
Biochemistry, 33, 1994
152D
DownloadVisualize
BU of 152d by Molmil
DIVERSITY OF WATER RING SIZE AT DNA INTERFACES: HYDRATION AND DYNAMICS OF DNA-ANTHRACYCLINE COMPLEXES
分子名称: DAUNOMYCIN, DNA (5'-D(*CP*GP*AP*TP*CP*G)-3')
著者Lipscomb, L.A, Peek, M.E, Zhou, F.X, Bertrand, J.A, VanDerveer, D, Williams, L.D.
登録日1993-12-13
公開日1994-05-04
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献Water ring structure at DNA interfaces: hydration and dynamics of DNA-anthracycline complexes.
Biochemistry, 33, 1994
6XF4
DownloadVisualize
BU of 6xf4 by Molmil
Crystal structure of STING REF variant in complex with E7766
分子名称: (1R,3R,15E,28R,29R,30R,31R,34R,36R,39S,41R)-29,41-difluoro-34,39-disulfanyl-2,33,35,38,40,42-hexaoxa-4,6,9,11,13,18,20,22,25,27-decaaza-34,39-diphosphaoctacyclo[28.6.4.1~3,36~.1~28,31~.0~4,8~.0~7,12~.0~19,24~.0~23,27~]dotetraconta-5,7,9,11,15,19,21,23,25-nonaene 34,39-dioxide (non-preferred name), 1,2-ETHANEDIOL, Stimulator of interferon genes protein
著者Chen, Y, Wang, J.Y, Kim, D.-S.
登録日2020-06-15
公開日2021-02-17
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2.77 Å)
主引用文献E7766, a Macrocycle-Bridged Stimulator of Interferon Genes (STING) Agonist with Potent Pan-Genotypic Activity.
Chemmedchem, 16, 2021
6S27
DownloadVisualize
BU of 6s27 by Molmil
Crystal structure of human wild type STING in complex with 2'3'-cyclic-GMP-2'F-2'dAMP
分子名称: 2'3'-cyclic-GMP-2'F-2'dAMP, Stimulator of interferon protein
著者Smola, M, Boura, E.
登録日2019-06-20
公開日2019-11-27
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2.802 Å)
主引用文献Enzymatic Preparation of 2'-5',3'-5'-Cyclic Dinucleotides, Their Binding Properties to Stimulator of Interferon Genes Adaptor Protein, and Structure/Activity Correlations.
J.Med.Chem., 62, 2019
6XF3
DownloadVisualize
BU of 6xf3 by Molmil
Crystal structure of STING in complex with E7766
分子名称: (1R,3R,15E,28R,29R,30R,31R,34R,36R,39S,41R)-29,41-difluoro-34,39-disulfanyl-2,33,35,38,40,42-hexaoxa-4,6,9,11,13,18,20,22,25,27-decaaza-34,39-diphosphaoctacyclo[28.6.4.1~3,36~.1~28,31~.0~4,8~.0~7,12~.0~19,24~.0~23,27~]dotetraconta-5,7,9,11,15,19,21,23,25-nonaene 34,39-dioxide (non-preferred name), Stimulator of interferon genes protein
著者Chen, Y, Wang, J.Y, Kim, D.-S.
登録日2020-06-15
公開日2021-02-17
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.38 Å)
主引用文献E7766, a Macrocycle-Bridged Stimulator of Interferon Genes (STING) Agonist with Potent Pan-Genotypic Activity.
Chemmedchem, 16, 2021
6S26
DownloadVisualize
BU of 6s26 by Molmil
Crystal structure of human wild type STING in complex with 2'-3'-cyclic-GMP-7-deaza-AMP
分子名称: 2-azanyl-9-[(1~{R},6~{R},8~{R},9~{R},10~{S},15~{R},17~{R},18~{R})-8-(4-azanylpyrrolo[2,3-d]pyrimidin-7-yl)-3,9,12,18-tetrakis(oxidanyl)-3,12-bis(oxidanylidene)-2,4,7,11,13,16-hexaoxa-3$l^{5},12$l^{5}-diphosphatricyclo[13.2.1.0^{6,10}]octadecan-17-yl]-1~{H}-purin-6-one, Stimulator of interferon protein
著者Boura, E, Smola, M, Brynda, J.
登録日2019-06-20
公開日2019-11-27
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2.05 Å)
主引用文献Enzymatic Preparation of 2'-5',3'-5'-Cyclic Dinucleotides, Their Binding Properties to Stimulator of Interferon Genes Adaptor Protein, and Structure/Activity Correlations.
J.Med.Chem., 62, 2019
6S86
DownloadVisualize
BU of 6s86 by Molmil
Human wtSTING in complex with 3'3'-c-di-GMP
分子名称: 9,9'-[(2R,3R,3aS,5S,7aR,9R,10R,10aS,12S,14aR)-3,5,10,12-tetrahydroxy-5,12-dioxidooctahydro-2H,7H-difuro[3,2-d:3',2'-j][1,3,7,9,2,8]tetraoxadiphosphacyclododecine-2,9-diyl]bis(2-amino-1,9-dihydro-6H-purin-6-one), Stimulator of Interferon genes
著者Smola, M, Boura, E.
登録日2019-07-08
公開日2019-07-17
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献No magnesium is needed for binding of the stimulator of interferon genes to cyclic dinucleotides.
Acta Crystallogr.,Sect.F, 75, 2019
6IFR
DownloadVisualize
BU of 6ifr by Molmil
Type III-A Csm complex, Cryo-EM structure of Csm-NTR, ATP bound
分子名称: ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, Type III-A CRISPR-associated RAMP protein Csm3, ...
著者You, L, Ma, J, Wang, J, Zhang, X, Wang, Y.
登録日2018-09-21
公開日2018-12-12
最終更新日2019-01-23
実験手法ELECTRON MICROSCOPY (3.4 Å)
主引用文献Structure Studies of the CRISPR-Csm Complex Reveal Mechanism of Co-transcriptional Interference
Cell, 176, 2019
7AG0
DownloadVisualize
BU of 7ag0 by Molmil
Complex between the bone morphogenetic protein 2 and its antagonist Noggin
分子名称: Bone morphogenetic protein 2, GLYCEROL, Noggin
著者Robert, C, Bruck, F, Herman, R, Vandevenne, M, Filee, P, Kerff, F, Matagne, A.
登録日2020-09-21
公開日2022-04-13
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (3.104 Å)
主引用文献Structural analysis of the interaction between human cytokine BMP-2 and the antagonist Noggin reveals molecular details of cell chondrogenesis inhibition.
J.Biol.Chem., 299, 2023
5FRA
DownloadVisualize
BU of 5fra by Molmil
CBM40_CPF0721-6'SL
分子名称: ACETATE ION, N-acetyl-alpha-neuraminic acid, N-acetyl-alpha-neuraminic acid-(2-6)-beta-D-galactopyranose, ...
著者Ribeiro, J.P, Pau, W, Pifferi, C, Renaudet, O, Varrot, A, Mahal, L.K, Imberty, A.
登録日2015-12-16
公開日2016-07-20
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Characterization of a High-Affinity Sialic Acid-Specific Cbm40 from Clostridium Perfringens and Engineering of a Divalent Form.
Biochem.J., 473, 2016
7SHP
DownloadVisualize
BU of 7shp by Molmil
Crystal structure of hSTING in complex with c[2',3'-(ribo-2'-G, xylo-3'-A)-MP](RJ244)
分子名称: (2S,5R,7R,8R,10S,12aR,14R,15R,15aR,16R)-7-(2-amino-6-oxo-3,6-dihydro-9H-purin-9-yl)-14-(6-amino-9H-purin-9-yl)-2,10,15,16-tetrahydroxyoctahydro-2H,10H,12H-5,8-methano-2lambda~5~,10lambda~5~-furo[3,2-l][1,3,6,9,11,2,10]pentaoxadiphosphacyclotetradecine-2,10-dione, Stimulator of interferon genes protein
著者Xie, W, Lama, L, Yang, X.J, Kuryavyi, V, Nudelman, I, Glickman, J.F, Jones, R.A, Tuschl, T, Patel, D.J.
登録日2021-10-11
公開日2022-10-19
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Arabinose- and xylose-modified analogs of 2',3'-cGAMP act as STING agonists.
Cell Chem Biol, 2023
7SHO
DownloadVisualize
BU of 7sho by Molmil
Crystal structure of hSTING in complex with c[2',3'-(ara-2'-G, ribo-3'-A)-MP] (RJ242)
分子名称: (2R,5R,7R,8S,10R,12aR,14R,15R,15aS,16R)-7-(2-amino-6-oxo-1,6-dihydro-9H-purin-9-yl)-14-(6-amino-9H-purin-9-yl)-2,10,15,16-tetrahydroxyoctahydro-2H,10H,12H-5,8-methano-2lambda~5~,10lambda~5~-furo[3,2-l][1,3,6,9,11,2,10]pentaoxadiphosphacyclotetradecine-2,10-dione, Stimulator of interferon genes protein
著者Xie, W, Lama, L, Yang, X.J, Kuryavyi, V, Nudelman, I, Glickman, J.F, Jones, R.A, Tuschl, T, Patel, D.J.
登録日2021-10-10
公開日2022-10-12
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.25 Å)
主引用文献Arabinose- and xylose-modified analogs of 2',3'-cGAMP act as STING agonists.
Cell Chem Biol, 2023
7YXV
DownloadVisualize
BU of 7yxv by Molmil
Crystal structure of a tautomerase superfamily member form Acinetobacter baumanii
分子名称: Anthranilate synthase, CHLORIDE ION, NITRATE ION
著者Pankov, G, Hunter, W.N.
登録日2022-02-16
公開日2022-05-18
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献The structure of a tautomerase superfamily member linked to the type VI secretion system of Acinetobacter baumannii.
Acta Crystallogr.,Sect.F, 79, 2023
6LNP
DownloadVisualize
BU of 6lnp by Molmil
Crystal structure of citrate Biosensor
分子名称: CITRIC ACID, Fusion protein of Green fluorescent protein and Sensor histidine kinase CitA
著者Wen, Y, Campbell, R.
登録日2019-12-31
公開日2020-05-06
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.993 Å)
主引用文献High-Performance Intensiometric Direct- and Inverse-Response Genetically Encoded Biosensors for Citrate.
Acs Cent.Sci., 6, 2020
2M2D
DownloadVisualize
BU of 2m2d by Molmil
Human programmed cell death 1 receptor
分子名称: Programmed cell death protein 1
著者Veverka, V, Cheng, X, Waters, L.C, Muskett, F.W, Morgan, S, Lesley, A, Griffiths, M, Stubberfield, C, Griffin, R, Henry, A.J, Robinson, M.K, Jansson, A, Ladbury, J.E, Ikemizu, S, Davis, S.J, Carr, M.D.
登録日2012-12-18
公開日2013-02-27
最終更新日2013-05-15
実験手法SOLUTION NMR
主引用文献Structure and interactions of the human programmed cell death 1 receptor.
J.Biol.Chem., 288, 2013
7BXY
DownloadVisualize
BU of 7bxy by Molmil
mRNA interferase from Bacillus cereus
分子名称: mRNA interferase
著者Kang, S.M.
登録日2020-04-21
公開日2021-04-28
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (1.98 Å)
主引用文献mRNA interferase from Bacillus cereus
To Be Published
8URL
DownloadVisualize
BU of 8url by Molmil
The Apo NanJ structure from Clostridium perfringens
分子名称: CALCIUM ION, Exo-alpha-sialidase NanJ
著者Medley, B.J, Boraston, A.B.
登録日2023-10-26
公開日2024-09-04
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献The apo structure of NanJ from Clostridium perfringens
To Be Published
8UB5
DownloadVisualize
BU of 8ub5 by Molmil
The Apo NanH structure from Clostridium perfringens
分子名称: 1,2-ETHANEDIOL, ACETYL GROUP, Sialidase
著者Medley, B.J, Boraston, A.B.
登録日2023-09-22
公開日2024-09-04
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献A terminal case of glycan catabolism structural and enzymatic characterization of the sialidases of Clostridium perfringens
To Be Published
5ACA
DownloadVisualize
BU of 5aca by Molmil
Structure-based energetics of protein interfaces guide Foot-and-Mouth disease virus vaccine design
分子名称: VP1, VP2, VP3, ...
著者Kotecha, A, Seago, J, Scott, K, Burman, A, Loureiro, S, Ren, J, Porta, C, Ginn, H.M, Jackson, T, Perez-Martin, E, Siebert, C.A, Paul, G, Huiskonen, J.T, Jones, I.M, Esnouf, R.M, Fry, E.E, Maree, F.F, Charleston, B, Stuart, D.I.
登録日2015-08-14
公開日2015-09-23
最終更新日2024-05-08
実験手法ELECTRON MICROSCOPY (3.5 Å)
主引用文献Structure-Based Energetics of Protein Interfaces Guide Foot-and-Mouth Disease Vaccine Design
Nat.Struct.Mol.Biol., 22, 2015

224931

件を2024-09-11に公開中

PDB statisticsPDBj update infoContact PDBjnumon