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5LIT
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BU of 5lit by Molmil
Structure of the DNA duplex d(AAATTT)2 with the potential antiparasitic drug 6XV at 1.25 A resolution
分子名称: 4-((4,5-dihydro-1H-imidazol-2-yl)amino)-N-(4-((4,5-dihydro-1H-imidazol-2-yl)amino)phenyl)benzamide dihydrochloride, DNA (5'-D(*AP*AP*AP*TP*TP*T)-3'), MAGNESIUM ION
著者Millan, C.R, Dardonville, C, de Koning, H.P, Saperas, N, Lourdes Campos, J.
登録日2016-07-15
公開日2017-06-14
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (1.25 Å)
主引用文献Functional and structural analysis of AT-specific minor groove binders that disrupt DNA-protein interactions and cause disintegration of the Trypanosoma brucei kinetoplast.
Nucleic Acids Res., 45, 2017
6JKZ
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BU of 6jkz by Molmil
Crystal structure of VvPlpA from Vibrio vulnificus
分子名称: 3-PYRIDINIUM-1-YLPROPANE-1-SULFONATE, CHLORIDE ION, Thermolabile hemolysin
著者Ma, Q, Wan, Y, Liu, C.
登録日2019-03-03
公開日2019-05-15
最終更新日2019-08-14
実験手法X-RAY DIFFRACTION (1.397 Å)
主引用文献Structural analysis of aVibriophospholipase reveals an unusual Ser-His-chloride catalytic triad.
J.Biol.Chem., 294, 2019
7JUO
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BU of 7juo by Molmil
CBP bromodomain complexed with YF2-23
分子名称: CREB-binding protein, N-{1-[1,1-di(pyridin-2-yl)ethyl]-6-(1-methyl-7-oxo-6,7-dihydro-1H-pyrrolo[2,3-c]pyridin-3-yl)-1H-indol-4-yl}ethanesulfonamide
著者Ratia, K.M, Xiong, R, Principe, D, Li, Y, Huang, F, Rana, A, Thatcher, G.
登録日2020-08-20
公開日2021-09-01
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献XP-524 is a dual-BET/EP300 inhibitor that represses oncogenic KRAS and potentiates immune checkpoint inhibition in pancreatic cancer.
Proc.Natl.Acad.Sci.USA, 119, 2022
7MPB
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BU of 7mpb by Molmil
SARS Coronavirus-2 Main Protease 3CL-pro binding Ascorbate
分子名称: 3C-like proteinase, ASCORBIC ACID, TRIFLUOROETHANOL
著者Pandey, S, Malla, T.N, Stojkovic, E.A, Schmidt, M.
登録日2021-05-04
公開日2021-05-12
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Vitamin C inhibits SARS coronavirus-2 main protease essential for viral replication
Biorxiv, 2021
13PK
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BU of 13pk by Molmil
TERNARY COMPLEX OF PHOSPHOGLYCERATE KINASE FROM TRYPANOSOMA BRUCEI
分子名称: 3-PHOSPHOGLYCERATE KINASE, 3-PHOSPHOGLYCERIC ACID, ADENOSINE-5'-DIPHOSPHATE, ...
著者Bernstein, B.E, Michels, P.A.M, Hol, W.G.J.
登録日1996-11-23
公開日1997-12-24
最終更新日2024-05-22
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Synergistic effects of substrate-induced conformational changes in phosphoglycerate kinase activation.
Nature, 385, 1997
1TC2
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BU of 1tc2 by Molmil
TERNARY SUBSTRATE COMPLEX OF THE HYPOXANTHINE PHOSPHORIBOSYLTRANSFERASE FROM TRYPANOSOMA CRUZI
分子名称: 1-O-pyrophosphono-5-O-phosphono-alpha-D-ribofuranose, 7-HYDROXY-PYRAZOLO[4,3-D]PYRIMIDINE, MAGNESIUM ION, ...
著者Focia, P.J, Craig III, S.P, Eakin, A.E.
登録日1998-11-04
公開日2000-03-08
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (1.81 Å)
主引用文献Approaching the transition state in the crystal structure of a phosphoribosyltransferase.
Biochemistry, 37, 1998
1EPX
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BU of 1epx by Molmil
CRYSTAL STRUCTURE ANALYSIS OF ALDOLASE FROM L. MEXICANA
分子名称: FRUCTOSE-1,6-BISPHOSPHATE ALDOLASE
著者Chudzik, D.M, Michels, P.A, de Walque, S, Hol, W.G.J.
登録日2000-03-29
公開日2000-07-13
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Structures of type 2 peroxisomal targeting signals in two trypanosomatid aldolases.
J.Mol.Biol., 300, 2000
8JA2
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BU of 8ja2 by Molmil
ASFV Topoisomerase ATPase domain in complex with AMP-PNP and Mg2+
分子名称: DNA topoisomerase 2, MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER
著者Pang, A.H, Chang, C.-W, Tsai, M.-D.
登録日2023-05-05
公開日2024-02-07
最終更新日2024-04-17
実験手法X-RAY DIFFRACTION (1.73 Å)
主引用文献A unified view on enzyme catalysis by cryo-EM study of a DNA topoisomerase.
Commun Chem, 7, 2024
6H9X
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BU of 6h9x by Molmil
Klebsiella pneumoniae Seryl-tRNA Synthetase in Complex with the Intermediate Analog 5'-O-(N-(L-Seryl)-Sulfamoyl)Adenosine
分子名称: 1,2-ETHANEDIOL, 5'-O-(N-(L-SERYL)-SULFAMOYL)ADENOSINE, CALCIUM ION, ...
著者Pang, L, De Graef, S, Strelkov, S.V, Weeks, S.D.
登録日2018-08-06
公開日2019-05-15
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Acylated sulfonamide adenosines as potent inhibitors of the adenylate-forming enzyme superfamily.
Eur.J.Med.Chem., 174, 2019
6FMO
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BU of 6fmo by Molmil
Crystal structure of the substrate (obtusifoliol)-bound and ligand-free I105F mutant of sterol 14-alpha demethylase (CYP51) from Trypanosoma cruzi
分子名称: Obtusifoliol, PROTOPORPHYRIN IX CONTAINING FE, Sterol 14alpha-demethylase
著者Hargrove, T.Y, Wawrzak, Z, Lepesheva, G.I.
登録日2018-02-01
公開日2018-10-24
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (3.18 Å)
主引用文献Binding of a physiological substrate causes large-scale conformational reorganization in cytochrome P450 51.
J. Biol. Chem., 293, 2018
6HHO
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BU of 6hho by Molmil
Crystal structure of RIP1 kinase in complex with GSK547
分子名称: 6-[4-[(5~{S})-5-[3,5-bis(fluoranyl)phenyl]pyrazolidin-1-yl]carbonylpiperidin-1-yl]pyrimidine-4-carbonitrile, Receptor-interacting serine/threonine-protein kinase 1
著者Thorpe, J.H, Harris, P.A.
登録日2018-08-28
公開日2018-12-12
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (3.49 Å)
主引用文献RIP1 Kinase Drives Macrophage-Mediated Adaptive Immune Tolerance in Pancreatic Cancer.
Cancer Cell, 34, 2018
5MS6
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BU of 5ms6 by Molmil
High-salt structure of RavZ LIR2-fused human LC3B
分子名称: Microtubule-associated proteins 1A/1B light chain 3B
著者Pantoom, S, Vetter, I.R, Wu, Y.W.
登録日2016-12-31
公開日2017-04-19
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Elucidation of the anti-autophagy mechanism of the Legionella effector RavZ using semisynthetic LC3 proteins.
Elife, 6, 2017
5NLK
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BU of 5nlk by Molmil
Crystal structure of CREBBP bromodomain complexd with US13A
分子名称: CREB-binding protein, ~{N}-[3-acetamido-5-[(5-ethanoyl-2-ethoxy-phenyl)carbamoyl]phenyl]furan-2-carboxamide
著者Zhu, J, Caflisch, A.
登録日2017-04-04
公開日2018-02-21
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Chemical Space Expansion of Bromodomain Ligands Guided by in Silico Virtual Couplings (AutoCouple).
ACS Cent Sci, 4, 2018
7XTF
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BU of 7xtf by Molmil
Crystal Structure of PL-5 family polysaccharide lyase PanPL-Y226F mutant from Pandoraea apista in apo form at pH5.5
分子名称: 1,2-ETHANEDIOL, CHLORIDE ION, Poly(Beta-D-mannuronate) lyase
著者Dash, P, Acharya, R.
登録日2022-05-17
公開日2022-08-10
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.73 Å)
主引用文献Distinct Modes of Hidden Structural Dynamics in the Functioning of an Allosteric Polysaccharide Lyase.
Acs Cent.Sci., 8, 2022
7XTE
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BU of 7xte by Molmil
Crystal Structure of PL-5 family polysaccharide lyase PanPL-N171L mutant from Pandoraea apista in apo form at pH3.5
分子名称: Poly(Beta-D-mannuronate) lyase
著者Dash, P, Acharya, R.
登録日2022-05-17
公開日2022-08-10
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Distinct Modes of Hidden Structural Dynamics in the Functioning of an Allosteric Polysaccharide Lyase.
Acs Cent.Sci., 8, 2022
4Z6K
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BU of 4z6k by Molmil
Alcohol dehydrogenase from the antarctic psychrophile Moraxella sp. TAE 123
分子名称: Alcohol dehydrogenase, ZINC ION
著者Papanikolau, Y, Bouriotis, V, Petratos, K.
登録日2015-04-05
公開日2016-04-13
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Structure and Dynamics of a Thermostable Alcohol Dehydrogenase from the Antarctic Psychrophile Moraxella sp. TAE123
Acs Omega, 2020
2WZJ
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BU of 2wzj by Molmil
Catalytic and UBA domain of kinase MARK2/(Par-1) K82R, T208E double mutant
分子名称: SERINE/THREONINE-PROTEIN KINASE MARK2
著者Panneerselvam, S, Marx, A, Mandelkow, E.-M, Mandelkow, E.
登録日2009-11-30
公開日2009-12-22
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (2.786 Å)
主引用文献Structure and Function of Polarity-Inducing Kinase Family Mark/Par-1 within the Branch of Ampk/Snf1-Related Kinases.
Faseb J., 24, 2010
3BMC
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BU of 3bmc by Molmil
Structure of Pteridine Reductase 1 (PTR1) from Trypanosoma brucei in ternary complex with cofactor (NADP+) and substrate (folate)
分子名称: FOLIC ACID, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, Pteridine reductase
著者Tulloch, L.B, Hunter, W.N.
登録日2007-12-13
公開日2008-12-16
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Structure-based design of pteridine reductase inhibitors targeting african sleeping sickness and the leishmaniases.
J.Med.Chem., 53, 2010
6HQU
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BU of 6hqu by Molmil
Humanised RadA mutant HumRadA22 in complex with a recombined BRC repeat 8-2
分子名称: ADENOSINE-5'-DIPHOSPHATE, Breast cancer type 2 susceptibility, DNA repair and recombination protein RadA, ...
著者Pantelejevs, T, Lindenburg, L, Hyvonen, M, Hollfelder, F.
登録日2018-09-25
公開日2019-10-09
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (1.97 Å)
主引用文献Improved RAD51 binders through motif shuffling based on the modularity of BRC repeats.
Proc.Natl.Acad.Sci.USA, 118, 2021
7WXR
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BU of 7wxr by Molmil
Crystal Structure of PL-5 family polysaccharide lyase PanPL-N171L mutant from Pandoraea apista in apo form
分子名称: poly(beta-D-mannuronate) lyase
著者Dash, P, Acharya, R.
登録日2022-02-15
公開日2022-08-10
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.88 Å)
主引用文献Distinct Modes of Hidden Structural Dynamics in the Functioning of an Allosteric Polysaccharide Lyase.
Acs Cent.Sci., 8, 2022
7WXP
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BU of 7wxp by Molmil
Crystal Structure of PL-5 family polysaccharide lyase PanPL-H172A mutant from Pandoraea apista in ManA bound form
分子名称: beta-D-mannopyranuronic acid-(1-4)-beta-D-mannopyranuronic acid, poly(beta-D-mannuronate) lyase
著者Dash, P, Acharya, R.
登録日2022-02-15
公開日2022-08-10
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Distinct Modes of Hidden Structural Dynamics in the Functioning of an Allosteric Polysaccharide Lyase.
Acs Cent.Sci., 8, 2022
7WXQ
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BU of 7wxq by Molmil
Crystal Structure of PL-5 family polysaccharide lyase PanPL-H172A mutant from Pandoraea apista in apo form
分子名称: CHLORIDE ION, poly(beta-D-mannuronate) lyase
著者Dash, P, Acharya, R.
登録日2022-02-15
公開日2022-08-10
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.03 Å)
主引用文献Distinct Modes of Hidden Structural Dynamics in the Functioning of an Allosteric Polysaccharide Lyase.
Acs Cent.Sci., 8, 2022
3B69
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BU of 3b69 by Molmil
T cruzi Trans-sialidase complex with benzoylated NANA derivative
分子名称: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, 5-acetamido-9-(benzoylamino)-3,5,9-trideoxy-3-fluoro-D-erythro-alpha-L-manno-non-2-ulopyranosonic acid, CHLORIDE ION, ...
著者Buschiazzo, A.
登録日2007-10-28
公開日2008-05-13
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.67 Å)
主引用文献A new generation of specific Trypanosoma cruzi trans-sialidase inhibitors.
Angew.Chem.Int.Ed.Engl., 47, 2008
5MS2
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BU of 5ms2 by Molmil
Crystal structure of the Legionella pneumophila effector protein RavZ in complex with human LC3B
分子名称: Legionella pneumophila effector protein RavZ, Microtubule-associated proteins 1A/1B light chain 3B
著者Pantoom, S, Vetter, I.R, Wu, Y.W.
登録日2016-12-30
公開日2017-04-19
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.47 Å)
主引用文献Elucidation of the anti-autophagy mechanism of the Legionella effector RavZ using semisynthetic LC3 proteins.
Elife, 6, 2017
6FLG
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BU of 6flg by Molmil
Crystal structure of zebrafish Sirtuin 5 in complex with 3(S)-(naphthylthio)succinyl-CPS1 peptide
分子名称: 1,2-ETHANEDIOL, 3(S)-(naphthylthio)succinyl-CPS1 peptide, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, ...
著者Pannek, M, Steegborn, C.
登録日2018-01-25
公開日2018-04-18
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Potent and Selective Inhibitors of Human Sirtuin 5.
J. Med. Chem., 61, 2018

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