PDB: 2866 件ウェブページステータス検索Chemie searchBIRD

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8K9I	Structure of CUL3-RBX1-KLHL22 complex without CUL3 NA motif 分子名称: Cullin-3, E3 ubiquitin-protein ligase RBX1, N-terminally processed, ... 著者 Wang, W, Ling, L, Dai, Z, Zuo, P, Yin, Y. 登録日 2023-08-01 公開日 2024-05-29 実験手法 ELECTRON MICROSCOPY (4.2 Å) 主引用文献 A conserved N-terminal motif of CUL3 contributes to assembly and E3 ligase activity of CRL3 KLHL22. Nat Commun, 15, 2024
8GQ6	Cryo-EM Structure of the KBTBD2-CUL3-Rbx1 dimeric complex 分子名称: Cullin-3, E3 ubiquitin-protein ligase RBX1, Kelch repeat and BTB domain-containing protein 2, ... 著者 Sun, L, Chen, Z, Hu, Y, Mao, Q. 登録日 2022-08-29 公開日 2023-09-06 最終更新日 2024-03-20 実験手法 ELECTRON MICROSCOPY (3.96 Å) 主引用文献 Dynamic molecular architecture and substrate recruitment of cullin3-RING E3 ligase CRL3 KBTBD2. Nat.Struct.Mol.Biol., 31, 2024
6UE5	Crystal structure of full-length human DCAF15-DDB1-deltaPBP-DDA1-RBM39 in complex with 4-(aminomethyl)-N-(3-cyano-4-methyl-1H-indol-7-yl)benzenesulfonamide 分子名称: 4-(aminomethyl)-N-(3-cyano-4-methyl-1H-indol-7-yl)benzene-1-sulfonamide, DDB1- and CUL4-associated factor 15, DET1- and DDB1-associated protein 1, ... 著者 Knapp, M.S, Shu, W, Xie, L, Bussiere, D.E. 登録日 2019-09-20 公開日 2019-12-18 最終更新日 2024-10-16 実験手法 X-RAY DIFFRACTION (2.61 Å) 主引用文献 Structural basis of indisulam-mediated RBM39 recruitment to DCAF15 E3 ligase complex. Nat.Chem.Biol., 16, 2020
2B5L	Crystal Structure of DDB1 In Complex with Simian Virus 5 V Protein 分子名称: Nonstructural protein V, ZINC ION, damage-specific DNA binding protein 1 著者 Li, T, Chen, X, Garbutt, K.C, Zhou, P, Zheng, N. 登録日 2005-09-28 公開日 2006-02-28 最終更新日 2023-08-23 実験手法 X-RAY DIFFRACTION (2.85 Å) 主引用文献 Structure of DDB1 in complex with a paramyxovirus V protein: viral hijack of a propeller cluster in ubiquitin ligase. Cell(Cambridge,Mass.), 124, 2006
8KG8	Yeast replisome in state II 分子名称: ADENOSINE-5'-DIPHOSPHATE, Cell division control protein 45, DNA (61-mer), ... 著者 Dang, S, Zhai, Y, Feng, J, Yu, D, Xu, Z. 登録日 2023-08-17 公開日 2023-12-06 実験手法 ELECTRON MICROSCOPY (4.23 Å) 主引用文献 Synergism between CMG helicase and leading strand DNA polymerase at replication fork. Nat Commun, 14, 2023
8W7S	Yeast replisome in state IV 分子名称: Cell division control protein 45, DNA (71-mer), DNA polymerase alpha-binding protein, ... 著者 Dang, S, Zhai, Y, Feng, J, Yu, D. 登録日 2023-08-31 公開日 2023-12-20 実験手法 ELECTRON MICROSCOPY (7.39 Å) 主引用文献 Synergism between CMG helicase and leading strand DNA polymerase at replication fork. Nat Commun, 14, 2023
8KG6	Yeast replisome in state I 分子名称: ADENOSINE-5'-DIPHOSPHATE, Cell division control protein 45, Chromosome segregation in meiosis protein 3, ... 著者 Dang, S, Zhai, Y, Feng, J, Yu, D, Xu, Z. 登録日 2023-08-17 公開日 2023-12-06 実験手法 ELECTRON MICROSCOPY (3.07 Å) 主引用文献 Synergism between CMG helicase and leading strand DNA polymerase at replication fork. Nat Commun, 14, 2023
8KG9	Yeast replisome in state III 分子名称: ADENOSINE-5'-DIPHOSPHATE, Cell division control protein 45, DNA (61-mer), ... 著者 Dang, S, Zhai, Y, Feng, J, Yu, D, Xu, Z. 登録日 2023-08-17 公開日 2023-12-06 実験手法 ELECTRON MICROSCOPY (4.52 Å) 主引用文献 Synergism between CMG helicase and leading strand DNA polymerase at replication fork. Nat Commun, 14, 2023
8AG5	Vaccinia C16 protein bound to Ku70/Ku80 分子名称: Ku70-Xrcc6, Protein C10, X-ray repair cross-complementing protein 5 著者 Rivera-Calzada, A, Arribas-Bosacoma, R, Pearl, L.H, Llorca, O. 登録日 2022-07-19 公開日 2022-11-09 最終更新日 2024-07-24 実験手法 ELECTRON MICROSCOPY (3.47 Å) 主引用文献 Structural basis for the inactivation of cytosolic DNA sensing by the vaccinia virus. Nat Commun, 13, 2022
8AG4	Vaccinia C16 protein bound to Ku70/Ku80 分子名称: Protein C10, X-ray repair cross-complementing protein 5, X-ray repair cross-complementing protein 6 著者 Rivera-Calzada, A, Arribas-Bosacoma, R, Pearl, L.H, Llorca, O. 登録日 2022-07-19 公開日 2022-11-09 最終更新日 2024-07-24 実験手法 ELECTRON MICROSCOPY (2.46 Å) 主引用文献 Structural basis for the inactivation of cytosolic DNA sensing by the vaccinia virus. Nat Commun, 13, 2022
8W7M	Yeast replisome in state V 分子名称: ADENOSINE-5'-DIPHOSPHATE, Cell division control protein 45, DNA (71-mer), ... 著者 Dang, S, Zhai, Y, Feng, J, Yu, D, Xu, Z. 登録日 2023-08-30 公開日 2023-12-06 実験手法 ELECTRON MICROSCOPY (4.12 Å) 主引用文献 Synergism between CMG helicase and leading strand DNA polymerase at replication fork. Nat Commun, 14, 2023
2B5M	Crystal Structure of DDB1 分子名称: damage-specific DNA binding protein 1 著者 Li, T, Chen, X, Garbutt, K.C, Zhou, P, Zheng, N. 登録日 2005-09-28 公開日 2006-02-28 最終更新日 2024-11-06 実験手法 X-RAY DIFFRACTION (2.92 Å) 主引用文献 Structure of DDB1 in complex with a paramyxovirus V protein: viral hijack of a propeller cluster in ubiquitin ligase. Cell(Cambridge,Mass.), 124, 2006
1MA7	Crystal structure of Cre site-specific recombinase complexed with a mutant DNA substrate, LoxP-A8/T27 分子名称: CRE RECOMBINASE, LOXP 著者 Martin, S.S, Chu, V.C, Baldwin, E.P. 登録日 2002-08-01 公開日 2003-07-08 最終更新日 2024-02-14 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 Modulation of the active complex assembly and turnover rate by protein-DNA interactions in Cre-LoxP recombination Biochemistry, 42, 2003
6FE8	Cryo-EM structure of the core Centromere Binding Factor 3 complex 分子名称: Centromere DNA-binding protein complex CBF3 subunit B, Centromere DNA-binding protein complex CBF3 subunit C, Suppressor of kinetochore protein 1 著者 Zhang, W.J, Lukoynova, N, Miah, S, Vaughan, C.K. 登録日 2017-12-30 公開日 2018-08-01 最終更新日 2019-12-11 実験手法 ELECTRON MICROSCOPY (3.7 Å) 主引用文献 Insights into Centromere DNA Bending Revealed by the Cryo-EM Structure of the Core Centromere Binding Factor 3 with Ndc10. Cell Rep, 24, 2018
1BIA	THE E. COLI BIOTIN HOLOENZYME SYNTHETASE(SLASH)BIO REPRESSOR CRYSTAL STRUCTURE DELINEATES THE BIOTIN AND DNA-BINDING DOMAINS 分子名称: BirA BIFUNCTIONAL PROTEIN 著者 Wilson, K.P, Shewchuk, L.M, Matthews, B.W. 登録日 1992-07-06 公開日 1993-10-31 最終更新日 2024-02-07 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 Escherichia coli biotin holoenzyme synthetase/bio repressor crystal structure delineates the biotin- and DNA-binding domains. Proc.Natl.Acad.Sci.USA, 89, 1992
6GSA	Core Centromere Binding Factor 3 (CBF3) with monomeric Ndc10 分子名称: Centromere DNA-binding protein complex CBF3 subunit A, Centromere DNA-binding protein complex CBF3 subunit B, Centromere DNA-binding protein complex CBF3 subunit C, ... 著者 Zhang, W.J, Lukoynova, N, Vaughan, C.K. 登録日 2018-06-13 公開日 2018-08-01 最終更新日 2024-10-23 実験手法 ELECTRON MICROSCOPY (4.2 Å) 主引用文献 Insights into Centromere DNA Bending Revealed by the Cryo-EM Structure of the Core Centromere Binding Factor 3 with Ndc10. Cell Rep, 24, 2018
1BIB	THE E. COLI BIOTIN HOLOENZYME SYNTHETASE(SLASH)BIO REPRESSOR CRYSTAL STRUCTURE DELINEATES THE BIOTIN AND DNA-BINDING DOMAINS 分子名称: BIOTIN, BIR A 著者 Wilson, K.P, Shewchuk, L.M, Matthews, B.W. 登録日 1992-07-06 公開日 1993-10-31 最終更新日 2024-02-07 実験手法 X-RAY DIFFRACTION (2.8 Å) 主引用文献 Escherichia coli biotin holoenzyme synthetase/bio repressor crystal structure delineates the biotin- and DNA-binding domains. Proc.Natl.Acad.Sci.USA, 89, 1992
3CRX	CRE RECOMBINASE/DNA COMPLEX INTERMEDIATE I 分子名称: CRE RECOMBINASE, DNA 35-MER 著者 Gopaul, D.N, Guo, F, Vanduyne, G.D. 登録日 1998-06-19 公開日 1999-12-14 最終更新日 2023-08-02 実験手法 X-RAY DIFFRACTION (2.5 Å) 主引用文献 Structure of the Holliday junction intermediate in Cre-loxP site-specific recombination. EMBO J., 17, 1998
7ONI	Structure of Neddylated CUL5 C-terminal region-RBX2-ARIH2* 分子名称: Cullin-5, E3 ubiquitin-protein ligase ARIH2, NEDD8, ... 著者 Kostrhon, S.P, prabu, J.R, Schulman, B.A. 登録日 2021-05-25 公開日 2021-09-15 最終更新日 2024-11-06 実験手法 ELECTRON MICROSCOPY (3.4 Å) 主引用文献 CUL5-ARIH2 E3-E3 ubiquitin ligase structure reveals cullin-specific NEDD8 activation. Nat.Chem.Biol., 17, 2021
7MWD	HUWE1 in map with focus on HECT 分子名称: E3 ubiquitin-protein ligase HUWE1 著者 Hunkeler, M, Fischer, E.S. 登録日 2021-05-16 公開日 2021-07-28 最終更新日 2024-05-29 実験手法 ELECTRON MICROSCOPY (3.7 Å) 主引用文献 Solenoid architecture of HUWE1 contributes to ligase activity and substrate recognition. Mol.Cell, 81, 2021
7MWF	HUWE1 in map with focus on interface 分子名称: E3 ubiquitin-protein ligase HUWE1 著者 Hunkeler, M, Fischer, E.S. 登録日 2021-05-16 公開日 2021-07-28 最終更新日 2024-05-29 実験手法 ELECTRON MICROSCOPY (3.3 Å) 主引用文献 Solenoid architecture of HUWE1 contributes to ligase activity and substrate recognition. Mol.Cell, 81, 2021
7MWE	HUWE1 in map with focus on WWE 分子名称: E3 ubiquitin-protein ligase HUWE1 著者 Hunkeler, M, Fischer, E.S. 登録日 2021-05-16 公開日 2021-07-28 最終更新日 2024-05-29 実験手法 ELECTRON MICROSCOPY (3.4 Å) 主引用文献 Solenoid architecture of HUWE1 contributes to ligase activity and substrate recognition. Mol.Cell, 81, 2021
8BJA	Structure of the human UBR5 Dimer. 分子名称: E3 ubiquitin-protein ligase UBR5, ZINC ION 著者 Hodakova, Z, Grishkovskaya, I, Haselbach, D. 登録日 2022-11-03 公開日 2023-07-12 最終更新日 2023-09-06 実験手法 ELECTRON MICROSCOPY (3 Å) 主引用文献 Cryo-EM structure of the chain-elongating E3 ubiquitin ligase UBR5. Embo J., 42, 2023
7XZZ	Cryo-EM structure of the nucleosome in complex with p53 分子名称: Cellular tumor antigen p53, DNA (169-MER), Histone H2A type 1-B/E, ... 著者 Nishimura, M, Nozawa, K, Takizawa, Y, Kurumizaka, H. 登録日 2022-06-03 公開日 2022-10-12 最終更新日 2024-07-03 実験手法 ELECTRON MICROSCOPY (4.07 Å) 主引用文献 Structural basis for p53 binding to its nucleosomal target DNA sequence. Pnas Nexus, 1, 2022
8B5W	Crystal structure of the E3 module from UBR4 分子名称: 1,2-ETHANEDIOL, ZINC ION, cDNA FLJ12511 fis, ... 著者 Virdee, S, Mabbitt, P.D, Barnsby-Greer, L. 登録日 2022-09-24 公開日 2023-10-04 最終更新日 2024-04-17 実験手法 X-RAY DIFFRACTION (1.8 Å) 主引用文献 UBE2A and UBE2B are recruited by an atypical E3 ligase module in UBR4. Nat.Struct.Mol.Biol., 31, 2024

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