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1T6B
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Crystal structure of B. anthracis Protective Antigen complexed with human Anthrax toxin receptor
分子名称: Anthrax toxin receptor 2, CALCIUM ION, MANGANESE (II) ION, ...
著者Santelli, E, Bankston, L.A, Leppla, S.H, Liddington, R.C.
登録日2004-05-05
公開日2004-07-20
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Crystal structure of a complex between anthrax toxin and its host cell receptor
Nature, 430, 2004
4JWY
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GluN2D ligand-binding core in complex with propyl-NHP5G
分子名称: (2R)-amino(1-hydroxy-4-propyl-1H-pyrazol-5-yl)ethanoic acid, Glutamate receptor ionotropic, NMDA 2D
著者Hansen, K.B, Tajima, N, Risgaard, R, Perszyk, R.E, Jorgensen, L, Vance, K.M, Ogden, K.K, Clausen, R.P, Furukawa, H, Traynelis, S.F.
登録日2013-03-27
公開日2013-05-29
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structural determinants of agonist efficacy at the glutamate binding site of N-methyl-d-aspartate receptors.
Mol.Pharmacol., 84, 2013
1TZN
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Crystal Structure of the Anthrax Toxin Protective Antigen Heptameric Prepore bound to the VWA domain of CMG2, an anthrax toxin receptor
分子名称: Anthrax toxin receptor 2, CALCIUM ION, MAGNESIUM ION, ...
著者Lacy, D.B, Wigelsworth, D.J, Melnyk, R.A, Collier, R.J.
登録日2004-07-10
公開日2004-08-17
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (4.3 Å)
主引用文献Structure of heptameric protective antigen bound to an anthrax toxin receptor: A role for receptor in pH-dependent pore formation
Proc.Natl.Acad.Sci.USA, 101, 2004
1TZO
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Crystal Structure of the Anthrax Toxin Protective Antigen Heptameric Prepore
分子名称: CALCIUM ION, Protective antigen
著者Lacy, D.B, Wigelsworth, D.J, Melnyk, R.A, Collier, R.J.
登録日2004-07-10
公開日2004-08-17
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (3.6 Å)
主引用文献Structure of heptameric protective antigen bound to an anthrax toxin receptor: A role for receptor in pH-dependent pore formation
Proc.Natl.Acad.Sci.USA, 101, 2004
6UJI
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Low resolution crystal structure (5.5 A) of the anthrax toxin protective antigen heptamer prepore D425A mutant
分子名称: Protective antigen PA-63
著者Lovell, S, Mehzabeen, N, Battaile, K.P, Bann, J.G.
登録日2019-10-03
公開日2020-10-07
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (5.5 Å)
主引用文献Structure of the anthrax protective antigen D425A dominant negative mutant reveals a stalled intermediate state of pore maturation.
J.Mol.Biol., 2022
7BM8
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Crystal structure of the C-terminally truncated chromosome-partitioning protein ParB from Caulobacter crescentus complexed with CTP-gamma-S
分子名称: CYTIDINE-5'-TRIPHOSPHATE, Chromosome-partitioning protein ParB, MAGNESIUM ION
著者Jalal, A.S, Tran, N.T, Stevenson, C.E.M, Lawson, D.M, Le, T.B.K.
登録日2021-01-19
公開日2021-04-28
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2.73 Å)
主引用文献A CTP-dependent gating mechanism enables ParB spreading on DNA.
Elife, 10, 2021
7F8J
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Cryo-EM structure of human pannexin-1 in a nanodisc
分子名称: 1-palmitoyl-2-oleoyl-sn-glycero-3-phosphocholine, Pannexin-1
著者Kuzuya, M, Hirano, H, Hayashida, K, Watanabe, M, Kobayashi, K, Tani, K, Fujiyoshi, Y, Oshima, A.
登録日2021-07-02
公開日2022-01-26
最終更新日2022-02-23
実験手法ELECTRON MICROSCOPY (3.6 Å)
主引用文献Structures of human pannexin-1 in nanodiscs reveal gating mediated by dynamic movement of the N terminus and phospholipids.
Sci.Signal., 15, 2022
7F8O
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Cryo-EM structure of the C-terminal deletion mutant of human PANX1 in a nanodisc
分子名称: 1-palmitoyl-2-oleoyl-sn-glycero-3-phosphocholine, Pannexin-1
著者Kuzuya, M, Hirano, H, Hayashida, K, Watanabe, M, Kobayashi, K, Tani, K, Fujiyoshi, Y, Oshima, A.
登録日2021-07-02
公開日2022-01-26
最終更新日2022-02-23
実験手法ELECTRON MICROSCOPY (3.6 Å)
主引用文献Structures of human pannexin-1 in nanodiscs reveal gating mediated by dynamic movement of the N terminus and phospholipids.
Sci.Signal., 15, 2022
7F8N
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Human pannexin-1 showing a conformational change in the N-terminal domain and blocked pore
分子名称: 1-palmitoyl-2-oleoyl-sn-glycero-3-phosphocholine, Pannexin-1
著者Kuzuya, M, Hirano, H, Hayashida, K, Watanabe, M, Kobayashi, K, Tani, K, Fujiyoshi, Y, Oshima, A.
登録日2021-07-02
公開日2022-01-26
最終更新日2022-02-23
実験手法ELECTRON MICROSCOPY (3.4 Å)
主引用文献Structures of human pannexin-1 in nanodiscs reveal gating mediated by dynamic movement of the N terminus and phospholipids.
Sci.Signal., 15, 2022
2FBN
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BU of 2fbn by Molmil
Plasmodium falciparum putative FK506-binding protein PFL2275c, C-terminal TPR-containing domain
分子名称: 70 kDa peptidylprolyl isomerase, putative
著者Dong, A, Lew, J, Koeieradzki, I, Sundararajan, E, Melone, M, Wasney, G, Zhao, Y, Edwards, A.M, Arrowsmith, C.H, Weigelt, J, Sundstrom, M, Bochkarev, A, Hui, R, Hills, T, Structural Genomics Consortium (SGC)
登録日2005-12-09
公開日2006-01-24
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (1.63 Å)
主引用文献Crystallographic structure of the tetratricopeptide repeat domain of Plasmodium falciparum FKBP35 and its molecular interaction with Hsp90 C-terminal pentapeptide.
Protein Sci., 18, 2009
7OXF
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BU of 7oxf by Molmil
Solution structure of bee apamin
分子名称: Apamin
著者Mineev, K, Kuzmenkov, A, Vassilevski, A.
登録日2021-06-22
公開日2022-07-13
最終更新日2023-06-14
実験手法SOLUTION NMR
主引用文献Apamin structure and pharmacology revisited.
Front Pharmacol, 13, 2022
5OMP
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BU of 5omp by Molmil
Human FKBP5 protein
分子名称: Peptidyl-prolyl cis-trans isomerase FKBP5, SULFATE ION
著者Kumar, R, Moche, M, Winblad, B, Pavlov, P.
登録日2017-08-01
公開日2017-11-08
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.88 Å)
主引用文献Combined x-ray crystallography and computational modeling approach to investigate the Hsp90 C-terminal peptide binding to FKBP51.
Sci Rep, 7, 2017
6B2X
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Apo YiuA Crystal Form 1
分子名称: CHLORIDE ION, SODIUM ION, Solute-binding periplasmic protein of iron/siderophore ABC transporter
著者Radka, C.D, DeLucas, L.J, Aller, S.G.
登録日2017-09-20
公開日2017-11-15
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.199 Å)
主引用文献The crystal structure of the Yersinia pestis iron chaperone YiuA reveals a basic triad binding motif for the chelated metal.
Acta Crystallogr D Struct Biol, 73, 2017
6B2Y
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Apo YiuA Crystal Form 2
分子名称: SODIUM ION, Solute-binding periplasmic protein of iron/siderophore ABC transporter
著者Radka, C.D, DeLucas, L.J, Aller, S.G.
登録日2017-09-20
公開日2017-11-15
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (1.77 Å)
主引用文献The crystal structure of the Yersinia pestis iron chaperone YiuA reveals a basic triad binding motif for the chelated metal.
Acta Crystallogr D Struct Biol, 73, 2017
4GX8
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BU of 4gx8 by Molmil
Crystal structure of a DNA polymerase III alpha-epsilon chimera
分子名称: CHLORIDE ION, DNA polymerase III subunit epsilon,DNA polymerase III subunit alpha
著者Robinson, A, Horan, N, Xu, Z.-Q, Dixon, N.E, Oakley, A.J.
登録日2012-09-04
公開日2013-04-03
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Proofreading exonuclease on a tether: the complex between the E. coli DNA polymerase III subunits alpha, {varepsilon}, theta and beta reveals a highly flexible arrangement of the proofreading domain
Nucleic Acids Res., 41, 2013
4GX9
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Crystal structure of a DNA polymerase III alpha-epsilon chimera
分子名称: DNA polymerase III subunit epsilon,DNA polymerase III subunit alpha
著者Li, N, Horan, N, Xu, Z.-Q, Jacques, D, Dixon, N.E, Oakley, A.J.
登録日2012-09-04
公開日2013-04-03
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.15 Å)
主引用文献Proofreading exonuclease on a tether: the complex between the E. coli DNA polymerase III subunits alpha, {varepsilon}, theta and beta reveals a highly flexible arrangement of the proofreading domain
Nucleic Acids Res., 41, 2013
3C9A
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BU of 3c9a by Molmil
High Resolution Crystal Structure of Argos bound to the EGF domain of Spitz
分子名称: BROMIDE ION, Protein giant-lens, Protein spitz
著者Klein, D.E, Stayrook, S.E, Shi, F, Narayan, K, Lemmon, M.A.
登録日2008-02-15
公開日2008-05-20
最終更新日2017-10-25
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Structural basis for EGFR ligand sequestration by Argos.
Nature, 453, 2008
3CA7
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BU of 3ca7 by Molmil
High Resolution Crystal Structure of the EGF domain of Spitz
分子名称: Protein spitz
著者Klein, D.E, Stayrook, S.E, Lemmon, M.A.
登録日2008-02-19
公開日2008-05-20
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Structural basis for EGFR ligand sequestration by Argos.
Nature, 453, 2008
5FR3
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BU of 5fr3 by Molmil
X-ray crystal structure of aggregation-resistant protective antigen of Bacillus anthracis (mutant S559L T576E)
分子名称: CALCIUM ION, GLYCEROL, PROTECTIVE ANTIGEN
著者Ganesan, A, Siekierska, A, Beerten, J, Brams, M, van Durme, J, De Baets, G, van der Kant, R, Gallardo, R, Ramakers, M, Langenberg, T, Wilkinson, H, De Smet, F, Ulens, C, Rousseau, F, Schymkowitz, J.
登録日2015-12-15
公開日2016-01-27
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.935 Å)
主引用文献Structural Hot Spots for the Solubility of Globular Proteins
Nat.Commun., 7, 2016
7WSV
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BU of 7wsv by Molmil
Cryo-EM structure of the N-terminal deletion mutant of human pannexin-1 in a nanodisc
分子名称: Pannexin-1
著者Kuzuya, M, Hirano, H, Hayashida, K, Watanabe, M, Kobayashi, K, Tani, K, Fujiyoshi, Y, Oshima, A.
登録日2022-02-01
公開日2022-02-16
最終更新日2022-02-23
実験手法ELECTRON MICROSCOPY (4.5 Å)
主引用文献Structures of human pannexin-1 in nanodiscs reveal gating mediated by dynamic movement of the N terminus and phospholipids.
Sci.Signal., 15, 2022
6T1F
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Crystal structure of the C-terminally truncated chromosome-partitioning protein ParB from Caulobacter crescentus complexed to the centromeric parS site
分子名称: Chromosome-partitioning protein ParB, DNA (5'-D(*GP*GP*AP*TP*GP*TP*TP*TP*CP*AP*CP*GP*TP*GP*AP*AP*AP*CP*AP*TP*CP*C)-3')
著者Jalal, A.S.B, Pastrana, C.L, Tran, N.T, Stevenson, C.E.M, Lawson, D.M, Moreno-Herrero, F, Le, T.B.K.
登録日2019-10-04
公開日2020-10-14
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献A CTP-dependent gating mechanism enables ParB spreading on DNA.
Elife, 10, 2021
2Y7C
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Atomic model of the Ocr-bound methylase complex from the Type I restriction-modification enzyme EcoKI (M2S1). Based on fitting into EM map 1534.
分子名称: GENE 0.3 PROTEIN, TYPE I RESTRICTION ENZYME ECOKI M PROTEIN, TYPE-1 RESTRICTION ENZYME ECOKI SPECIFICITY PROTEIN
著者Kennaway, C.K, Obarska-Kosinska, A, White, J.H, Tuszynska, I, Cooper, L.P, Bujnicki, J.M, Trinick, J, Dryden, D.T.F.
登録日2011-01-31
公開日2011-02-09
最終更新日2024-05-08
実験手法ELECTRON MICROSCOPY (18 Å)
主引用文献The Structure of M.Ecoki Type I DNA Methyltransferase with a DNA Mimic Antirestriction Protein.
Nucleic Acids Res., 37, 2009
7ZF2
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Protomeric substructure from an octameric assembly of M. tuberculosis RNA polymerase in complex with sigma-b initiation factor
分子名称: DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, DNA-directed RNA polymerase subunit beta', ...
著者Trapani, S, Bron, P, Lai Kee Him, J, Brodolin, K, Morichaud, Z, Vishwakarma, R.
登録日2022-03-31
公開日2023-02-08
最終更新日2024-03-27
実験手法ELECTRON MICROSCOPY (3.86 Å)
主引用文献Structural basis of the mycobacterial stress-response RNA polymerase auto-inhibition via oligomerization.
Nat Commun, 14, 2023
2ID0
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Escherichia coli RNase II
分子名称: Exoribonuclease 2, MANGANESE (II) ION
著者Zuo, Y, Zhang, J, Wang, Y, Malhotra, A.
登録日2006-09-13
公開日2006-10-03
最終更新日2017-10-18
実験手法X-RAY DIFFRACTION (2.35 Å)
主引用文献Structural Basis for Processivity and Single-Strand Specificity of RNase II.
Mol.Cell, 24, 2006
4NAM
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1.7A structure of 5-Fluoro Tryptophan Labeled Protective Antigen (W206Y)
分子名称: CALCIUM ION, Protective antigen
著者Lovell, S, Battaile, K.P, Chadegani, F, Mulangi, V, Miyagi, M, Bann, J.G.
登録日2013-10-22
公開日2014-01-22
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献(19)F nuclear magnetic resonance and crystallographic studies of 5-fluorotryptophan-labeled anthrax protective antigen and effects of the receptor on stability.
Biochemistry, 53, 2014

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