Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

4V82
DownloadVisualize
BU of 4v82 by Molmil
Crystal structure of cyanobacterial Photosystem II in complex with terbutryn
分子名称: 1,2-DI-O-ACYL-3-O-[6-DEOXY-6-SULFO-ALPHA-D-GLUCOPYRANOSYL]-SN-GLYCEROL, 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE, 1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE, ...
著者Gabdulkhakov, A, Broser, M, Guskov, A, Kern, J, Glockner, C, Muh, F, Saenger, W, Zouni, A.
登録日2010-11-30
公開日2014-07-09
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (3.2 Å)
主引用文献Structural basis of cyanobacterial photosystem II Inhibition by the herbicide terbutryn
J.Biol.Chem., 286, 2011
8HYK
DownloadVisualize
BU of 8hyk by Molmil
CD-NTase EfCdnE in complex with intermediate pppU[2'-5']p
分子名称: EfCdnE, MAGNESIUM ION, [[(2R,3R,4R,5R)-5-[2,4-bis(oxidanylidene)pyrimidin-1-yl]-3-oxidanyl-4-phosphonooxy-oxolan-2-yl]methoxy-oxidanyl-phosphoryl] phosphono hydrogen phosphate
著者Ko, T.-P, Wang, Y.-C, Yang, C.-S, Hou, M.-H, Chen, Y.
登録日2023-01-06
公開日2023-07-05
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2.021 Å)
主引用文献Crystal structure and functional implications of cyclic di-pyrimidine-synthesizing cGAS/DncV-like nucleotidyltransferases.
Nat Commun, 14, 2023
2FWA
DownloadVisualize
BU of 2fwa by Molmil
Structure of PurE (N5-carboxyaminoimidazole ribonucleotide mutase) H89N from the acidophilic bacterium Acetobacter aceti, at pH 7
分子名称: N5-carboxyaminoimidazole ribonucleotide mutase
著者Starks, C.M, Kappock, T.J.
登録日2006-02-01
公開日2006-06-13
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Biochemical and Structural Studies of N(5)-Carboxyaminoimidazole Ribonucleotide Mutase from the Acidophilic Bacterium Acetobacter aceti.
Biochemistry, 45, 2006
6XLX
DownloadVisualize
BU of 6xlx by Molmil
Crystal structure of cancer-associated G301D mutant of U2AF65 bound to AdML splice site
分子名称: DNA/RNA (5'-R(P*UP*UP*(UD)P*UP*U)-D(P*(BRU))-R(P*CP*C)-3'), Splicing factor U2AF 65 kDa subunit
著者Maji, D, Jenkins, J.L, Kielkopf, C.L.
登録日2020-06-29
公開日2020-10-07
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Representative cancer-associated U2AF2 mutations alter RNA interactions and splicing.
J.Biol.Chem., 295, 2020
1E4U
DownloadVisualize
BU of 1e4u by Molmil
N-terminal RING finger domain of human NOT-4
分子名称: TRANSCRIPTIONAL REPRESSOR NOT4, ZINC ION
著者Hanzawa, H, De Ruwe, M.J, Albert, T.K, Van Der Vliet, P.C, Timmers, H.T, Boelens, R.
登録日2000-07-12
公開日2001-03-31
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献The Structure of the C4C4 Ring Finger of Human not4 Reveals Features Distinct from Those of C3Hc4 Ring Fingers
J.Biol.Chem., 276, 2001
6XT5
DownloadVisualize
BU of 6xt5 by Molmil
Jack bean asparaginyl endopeptidase
分子名称: Legumain
著者Nonis, S.G, Haywood, J, Schmidberger, J.W, Bond, C.S.
登録日2020-07-17
公開日2020-11-11
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.69 Å)
主引用文献Structural and biochemical analyses of concanavalin A circular permutation by jack bean asparaginyl endopeptidase.
Plant Cell, 33, 2021
3VW8
DownloadVisualize
BU of 3vw8 by Molmil
Crystal structure of human c-Met kinase domain with its inhibitor
分子名称: CHLORIDE ION, Hepatocyte growth factor receptor, N-({4-[(6,7-dimethoxyquinolin-4-yl)oxy]phenyl}carbamothioyl)-2-phenylacetamide
著者Matsumoto, S, Miyamoto, N, Hirayama, T, Oki, H, Okada, K, Tawada, M, Iwata, H, Miki, H, Nakamura, K, Hori, A, Imamura, S.
登録日2012-08-08
公開日2013-08-14
最終更新日2024-05-29
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Structure-based design, synthesis, and evaluation of imidazo[1,2-b]pyridazine and imidazo[1,2-a]pyridine derivatives as novel dual c-Met and VEGFR2 kinase inhibitors.
Bioorg.Med.Chem., 21, 2013
1W3E
DownloadVisualize
BU of 1w3e by Molmil
Ribosomal L30e of Thermococcus celer, P59A mutant
分子名称: 50S RIBOSOMAL PROTEIN L30E
著者Ma, H.W, Lee, C.F, Allen, M.D, Bycroft, M, Wong, K.B.
登録日2004-07-15
公開日2006-10-19
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (1.77 Å)
主引用文献Role of Proline Residues in Thermostability of T. Celer L30E Protein
To be Published
6XV4
DownloadVisualize
BU of 6xv4 by Molmil
Neutron structure of ferric ascorbate peroxidase-ascorbate complex
分子名称: ASCORBIC ACID, Ascorbate peroxidase, POTASSIUM ION, ...
著者Kwon, H, Basran, J, Devos, J.M, Schrader, T.E, Ostermann, A, Blakeley, M.P, Raven, E.L, Moody, P.C.E.
登録日2020-01-21
公開日2020-03-18
最終更新日2024-05-01
実験手法NEUTRON DIFFRACTION (1.9 Å), X-RAY DIFFRACTION
主引用文献Visualizing the protons in a metalloenzyme electron proton transfer pathway.
Proc.Natl.Acad.Sci.USA, 117, 2020
5W0C
DownloadVisualize
BU of 5w0c by Molmil
Cytochrome P450 (CYP) 2C9 TCA007 Inhibitor Complex
分子名称: Cytochrome P450 2C9, GLYCEROL, PROTOPORPHYRIN IX CONTAINING FE, ...
著者Johnson, E.F, Hsu, M.-H.
登録日2017-05-30
公開日2017-09-13
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.001 Å)
主引用文献Determinants of the Inhibition of DprE1 and CYP2C9 by Antitubercular Thiophenes.
Angew. Chem. Int. Ed. Engl., 56, 2017
5W18
DownloadVisualize
BU of 5w18 by Molmil
Staphylococcus aureus ClpP in complex with (S)-N-((2R,6S,8aS,14aS,20S,23aS)-2,6-dimethyl-5,8,14,19,23-pentaoxooctadecahydro-1H,5H,14H,19H-pyrido[2,1-i]dipyrrolo[2,1-c:2',1'-l][1]oxa[4,7,10,13]tetraazacyclohexadecin-20-yl)-3-phenyl-2-(3-phenylureido)propanamide
分子名称: 9V7-PHE-SER-PRO-YCP-ALA-MP8, ATP-dependent Clp protease proteolytic subunit
著者Lee, R.E, Griffith, E.C.
登録日2017-06-02
公開日2017-08-09
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.44 Å)
主引用文献Ureadepsipeptides as ClpP Activators.
Acs Infect Dis., 2019
7N6M
DownloadVisualize
BU of 7n6m by Molmil
Crystal structure of the substrate-binding domain of E. coli DnaK in complex with the peptide RQKPLLGLSR
分子名称: Alkaline phosphatase peptide, Chaperone protein DnaK, SULFATE ION
著者Jansen, R.M, Ozden, C, Gierasch, L.M, Garman, S.C.
登録日2021-06-08
公開日2021-06-23
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.82 Å)
主引用文献Selective promiscuity in the binding of E. coli Hsp70 to an unfolded protein.
Proc.Natl.Acad.Sci.USA, 118, 2021
7N6K
DownloadVisualize
BU of 7n6k by Molmil
Crystal structure of the substrate-binding domain of E. coli DnaK in complex with the peptide RALALLPLSR
分子名称: Alkaline phosphatase peptide, Chaperone protein DnaK, SULFATE ION
著者Jansen, R.M, Ozden, C, Gierasch, L.M, Garman, S.C.
登録日2021-06-08
公開日2021-06-23
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.55 Å)
主引用文献Selective promiscuity in the binding of E. coli Hsp70 to an unfolded protein.
Proc.Natl.Acad.Sci.USA, 118, 2021
7N6J
DownloadVisualize
BU of 7n6j by Molmil
Crystal structure of the substrate-binding domain of E. coli DnaK in complex with the peptide RKQSTIALALLPLLFTPRR
分子名称: Alkaline phosphatase peptide, Chaperone protein DnaK, SULFATE ION
著者Jansen, R.M, Ozden, C, Gierasch, L.M, Garman, S.C.
登録日2021-06-08
公開日2021-06-23
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Selective promiscuity in the binding of E. coli Hsp70 to an unfolded protein.
Proc.Natl.Acad.Sci.USA, 118, 2021
2RJY
DownloadVisualize
BU of 2rjy by Molmil
Crystal structure of villin headpiece, P21 21 21 space group
分子名称: Villin-1
著者Meng, J, McKnight, C.J.
登録日2007-10-16
公開日2008-09-23
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献Crystal structure of a pH-stabilized mutant of villin headpiece.
Biochemistry, 47, 2008
5A2Q
DownloadVisualize
BU of 5a2q by Molmil
Structure of the HCV IRES bound to the human ribosome
分子名称: 18S RRNA, HCV IRES, MAGNESIUM ION, ...
著者Quade, N, Leiundgut, M, Boehringer, D, Heuvel, J.v.d, Ban, N.
登録日2015-05-21
公開日2015-07-15
最終更新日2019-12-18
実験手法ELECTRON MICROSCOPY (3.9 Å)
主引用文献Cryo-Em Structure of Hepatitis C Virus Ires Bound to the Human Ribosome at 3.9 Angstrom Resolution
Nat.Commun., 6, 2015
6DZ8
DownloadVisualize
BU of 6dz8 by Molmil
Crystal structure of S. aureus penicillin binding protein 4 (PBP4) mutant (S75C)
分子名称: Penicillin-binding protein 4, ZINC ION
著者Alexander, J.A.N, Strynadka, N.C.J.
登録日2018-07-03
公開日2018-12-19
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.86 Å)
主引用文献Recognition of Peptidoglycan Fragments by the Transpeptidase PBP4 FromStaphylococcus aureus.
Front Microbiol, 9, 2018
7N6L
DownloadVisualize
BU of 7n6l by Molmil
Crystal structure of the substrate-binding domain of E. coli DnaK in complex with the peptide EANQQKPLLGLFADG
分子名称: Alkaline phosphatase peptide, Chaperone protein DnaK, GLYCEROL, ...
著者Jansen, R.M, Ozden, C, Gierasch, L.M, Garman, S.C.
登録日2021-06-08
公開日2021-06-23
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Selective promiscuity in the binding of E. coli Hsp70 to an unfolded protein.
Proc.Natl.Acad.Sci.USA, 118, 2021
1VZK
DownloadVisualize
BU of 1vzk by Molmil
A Thiophene Based Diamidine Forms a "Super" AT Binding Minor Groove Agent
分子名称: 2-(5-{4-[AMINO(IMINO)METHYL]PHENYL}-2-THIENYL)-1H-BENZIMIDAZOLE-6- CARBOXIMIDAMIDE DIHYDROCHLORIDE, 5'-D(*CP*GP*CP*GP*AP*AP*TP*TP*CP*GP *CP*G)-3', MAGNESIUM ION
著者Mallena, S, Lee, M.P.H, Bailly, C, Neidle, S, Kumar, A, Boykin, D.W, Wilson, W.D.
登録日2004-05-20
公開日2004-10-25
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (1.77 Å)
主引用文献Thiophene-Based Diamidine Forms a "Super" at Binding Minor Groove Agent
J.Am.Chem.Soc., 142, 2004
1MUK
DownloadVisualize
BU of 1muk by Molmil
reovirus lambda3 native structure
分子名称: MINOR CORE PROTEIN LAMBDA 3
著者Tao, Y, Farsetta, D.L, Nibert, M.L, Harrison, S.C.
登録日2002-09-24
公開日2002-12-18
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献RNA Synthesis in a Cage-Structural Studies of Reovirus Polymerase lambda3
Cell(Cambridge,Mass.), 111, 2002
6XY0
DownloadVisualize
BU of 6xy0 by Molmil
Crystal structure of a de novo designed parallel four-helix coiled coil, 3-EK-4
分子名称: 3-EK-4
著者Edgell, C.L, Savery, N.J, Woolfson, D.N.
登録日2020-01-29
公開日2020-03-18
最終更新日2020-03-25
実験手法X-RAY DIFFRACTION (1.11 Å)
主引用文献RobustDe Novo-Designed Homotetrameric Coiled Coils.
Biochemistry, 59, 2020
4P9O
DownloadVisualize
BU of 4p9o by Molmil
Complex of Voltage-gated ion channel in a the presence of channel blocking compound
分子名称: BROMIDE ION, HEGA-10, Ion transport protein
著者Naylor, C.E, Bagneris, C, Wallace, B.A.
登録日2014-04-04
公開日2014-06-04
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2.89 Å)
主引用文献Prokaryotic NavMs channel as a structural and functional model for eukaryotic sodium channel antagonism.
Proc.Natl.Acad.Sci.USA, 111, 2014
5WDM
DownloadVisualize
BU of 5wdm by Molmil
An ultra-stable single-chain insulin analog resists thermal inactivation and exhibits biological signaling duration equivalent to the native protein
分子名称: Single-chain insulin analog
著者Yee, V.C, Aldabbagh, K, Peng, Y.
登録日2017-07-05
公開日2017-11-15
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.803 Å)
主引用文献An ultra-stable single-chain insulin analog resists thermal inactivation and exhibits biological signaling duration equivalent to the native protein.
J. Biol. Chem., 293, 2018
6XLV
DownloadVisualize
BU of 6xlv by Molmil
Crystal structure of leukemia-associated N196K mutant of U2AF65 bound to AdML splice site
分子名称: DNA/RNA (5'-R(P*UP*UP*(UD)P*UP*U)-D(P*(BRU))-R(P*CP*C)-3'), Splicing factor U2AF 65 kDa subunit
著者Maji, D, Jenkins, J.L, Kielkopf, C.L.
登録日2020-06-29
公開日2020-10-07
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献Representative cancer-associated U2AF2 mutations alter RNA interactions and splicing.
J.Biol.Chem., 295, 2020
8CC7
DownloadVisualize
BU of 8cc7 by Molmil
Mouse serotonin 5-HT3A receptor in complex with PZ-1939
分子名称: 1-(3-chlorophenyl)sulfonyl-4-piperazin-1-yl-pyrrolo[3,2-c]quinoline, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Lopez-Sanchez, U, Nury, H.
登録日2023-01-26
公開日2023-10-11
最終更新日2023-11-22
実験手法ELECTRON MICROSCOPY (3 Å)
主引用文献Superiority of the Triple-Acting 5-HT 6 R/5-HT 3 R Antagonist and MAO-B Reversible Inhibitor PZ-1922 over 5-HT 6 R Antagonist Intepirdine in Alleviation of Cognitive Deficits in Rats.
J.Med.Chem., 66, 2023

222624

件を2024-07-17に公開中

PDB statisticsPDBj update infoContact PDBjnumon