Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

4V7V
DownloadVisualize
BU of 4v7v by Molmil
Crystal structure of the E. coli ribosome bound to clindamycin.
分子名称: 16S rRNA, 23S rRNA, 30S ribosomal protein S10, ...
著者Dunkle, J.A, Xiong, L, Mankin, A.S, Cate, J.H.D.
登録日2010-08-16
公開日2014-07-09
最終更新日2014-12-10
実験手法X-RAY DIFFRACTION (3.2891 Å)
主引用文献Structures of the Escherichia coli ribosome with antibiotics bound near the peptidyl transferase center explain spectra of drug action.
Proc.Natl.Acad.Sci.USA, 107, 2010
5KZS
DownloadVisualize
BU of 5kzs by Molmil
Listeria monocytogenes internalin-like protein lmo2027
分子名称: Putative cell surface protein, similar to internalin proteins
著者Light, S.H, Nocadello, S, Minasov, G, Cardona-Correa, A, Kwon, K, Faralla, C, Bakardjiev, A, Anderson, W.F, Center for Structural Genomics of Infectious Diseases (CSGID)
登録日2016-07-25
公開日2017-07-26
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Listeria monocytogenes InlP interacts with afadin and facilitates basement membrane crossing.
Plos Pathog., 14, 2018
6AVQ
DownloadVisualize
BU of 6avq by Molmil
The Therapeutic Antibody LM609 Selectively Inhibits Ligand Binding to Human alpha-V beta-3 Integrin via Steric Hindrance
分子名称: Integrin alpha-V, Integrin beta-3, LM609 Fab heavy chain, ...
著者Borst, A.J, James, Z.N, Zagotta, W.N, Ginsberg, M, Rey, F.A, DiMaio, F, Backovic, M, Veesler, D.
登録日2017-09-04
公開日2017-11-01
最終更新日2024-03-13
実験手法ELECTRON MICROSCOPY (35 Å)
主引用文献The Therapeutic Antibody LM609 Selectively Inhibits Ligand Binding to Human alpha V beta 3 Integrin via Steric Hindrance.
Structure, 25, 2017
6AVR
DownloadVisualize
BU of 6avr by Molmil
Human alpha-V beta-3 Integrin (intermediate conformation) in complex with the therapeutic antibody LM609
分子名称: Fab LM609 heavy chain, Fab LM609 light chain, Integrin alpha-V, ...
著者Borst, A.J, James, Z.N, Zagotta, W.N, Ginsberg, M, Rey, F.A, DiMaio, F, Backovic, M, Veesler, D.
登録日2017-09-04
公開日2017-11-01
最終更新日2024-03-13
実験手法ELECTRON MICROSCOPY (35 Å)
主引用文献The Therapeutic Antibody LM609 Selectively Inhibits Ligand Binding to Human alpha V beta 3 Integrin via Steric Hindrance.
Structure, 25, 2017
6AXF
DownloadVisualize
BU of 6axf by Molmil
Structure of RasGRP2 in complex with Rap1B
分子名称: RAS guanyl-releasing protein 2, Ras-related protein Rap-1b
著者Kondo, Y, Iwig, J.S, Kuriyan, J.
登録日2017-09-06
公開日2017-10-11
実験手法X-RAY DIFFRACTION (3.1 Å)
主引用文献A histidine pH sensor regulates activation of the Ras-specific guanine nucleotide exchange factor RasGRP1.
Elife, 6, 2017
8TP6
DownloadVisualize
BU of 8tp6 by Molmil
H2 hemagglutinin (A/Singapore/1/1957) in complex with RBS-targeting Fab 4-1-1E02
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Heavy chain of 4-1-1E02 Fab, ...
著者Yang, Y.R, Han, J, Perrett, H.R, Ward, A.B.
登録日2023-08-04
公開日2023-10-11
実験手法ELECTRON MICROSCOPY (3.1 Å)
主引用文献Immune memory shapes human polyclonal antibody responses to H2N2 vaccination.
Biorxiv, 2023
8TP7
DownloadVisualize
BU of 8tp7 by Molmil
H2 hemagglutinin (A/Singapore/1/1957) in complex with Sa-targeting Fab 4-1-1G03
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, Heavy chain of monoclonal antibody 4-1-1G03, ...
著者Yang, Y.R, Han, J, Perrett, H.R, Ward, A.B.
登録日2023-08-04
公開日2023-10-11
実験手法ELECTRON MICROSCOPY (2.8 Å)
主引用文献Immune memory shapes human polyclonal antibody responses to H2N2 vaccination.
Biorxiv, 2023
8TP3
DownloadVisualize
BU of 8tp3 by Molmil
H1 hemagglutinin (NC99) in complex with RBS-targeting Fab 1-1-1F05
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Heavy chain of Fab 1-1-1F05, ...
著者Yang, Y.R, Han, J, Perrett, H.R, Ward, A.B.
登録日2023-08-04
公開日2023-10-11
実験手法ELECTRON MICROSCOPY (3.6 Å)
主引用文献Immune memory shapes human polyclonal antibody responses to H2N2 vaccination.
Biorxiv, 2023
8TP4
DownloadVisualize
BU of 8tp4 by Molmil
H2 hemagglutinin (A/Singapore/1/1957) in complex with RBS-targeting Fab 1-1-1E04
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Heavy chain of Fab 1-1-1E04, ...
著者Yang, Y.R, Han, J, Perrett, H.R, Ward, A.B.
登録日2023-08-04
公開日2023-10-11
実験手法ELECTRON MICROSCOPY (3.3 Å)
主引用文献Immune memory shapes human polyclonal antibody responses to H2N2 vaccination.
Biorxiv, 2023
8TP2
DownloadVisualize
BU of 8tp2 by Molmil
H2 hemagglutinin (A/Singapore/1/1957) in complex with RBS-targeting 1-1-1F05
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, Heavy chain of Fab 1-1-1F05, ...
著者Yang, Y.R, Han, J, Perrett, H.R, Ward, A.B.
登録日2023-08-04
公開日2023-10-11
実験手法ELECTRON MICROSCOPY (3.1 Å)
主引用文献Immune memory shapes human polyclonal antibody responses to H2N2 vaccination.
Biorxiv, 2023
8TP5
DownloadVisualize
BU of 8tp5 by Molmil
H1 hemagglutinin (NC99) in complex with RBS-targeting Fab 1-1-1E04
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Heavy chain of Fab 1-1-1E04, ...
著者Yang, Y.R, Han, J, Perrett, H.R, Ward, A.B.
登録日2023-08-04
公開日2023-10-11
実験手法ELECTRON MICROSCOPY (2.9 Å)
主引用文献Immune memory shapes human polyclonal antibody responses to H2N2 vaccination.
Biorxiv, 2023
6B0T
DownloadVisualize
BU of 6b0t by Molmil
Structural Insights into the Induced-fit Inhibition of Fascin by a Small Molecule
分子名称: 4-methyl-N-(1-{[4-(trifluoromethyl)phenyl]methyl}-1H-indazol-3-yl)-1,2-oxazole-5-carboxamide, Fascin
著者Dey, R, Huang, X.Y.
登録日2017-09-15
公開日2018-04-18
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Structural Insights into the Induced-fit Inhibition of Fascin by a Small-Molecule Inhibitor.
J. Mol. Biol., 430, 2018
6I14
DownloadVisualize
BU of 6i14 by Molmil
CRYSTAL STRUCTURE OF FASCIN IN COMPLEX WITH COMPOUND 9
分子名称: 2-[(3,4-dichlorophenyl)methyl]-~{N}-(1-methylpyrazol-4-yl)-1-oxidanylidene-isoquinoline-4-carboxamide, ACETATE ION, Fascin
著者Schuettelkopf, A.W.
登録日2018-10-27
公開日2019-02-27
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.73 Å)
主引用文献Structure-based design, synthesis and biological evaluation of a novel series of isoquinolone and pyrazolo[4,3-c]pyridine inhibitors of fascin 1 as potential anti-metastatic agents.
Bioorg.Med.Chem.Lett., 29, 2019
6AVU
DownloadVisualize
BU of 6avu by Molmil
Human alpha-V beta-3 Integrin (open conformation) in complex with the therapeutic antibody LM609
分子名称: Fab LM609 heavy chain, Fab LM609 light chain, Integrin alpha-V, ...
著者Borst, A.J, James, Z.N, Zagotta, W.N, Ginsberg, M, Rey, F.A, DiMaio, F, Backovic, M, Veesler, D.
登録日2017-09-04
公開日2017-11-01
最終更新日2024-03-13
実験手法ELECTRON MICROSCOPY (35 Å)
主引用文献The Therapeutic Antibody LM609 Selectively Inhibits Ligand Binding to Human alpha V beta 3 Integrin via Steric Hindrance.
Structure, 25, 2017
8DHB
DownloadVisualize
BU of 8dhb by Molmil
Active FLCN GAP complex
分子名称: BERYLLIUM TRIFLUORIDE ION, Folliculin, Folliculin-interacting protein 2, ...
著者Jansen, R.M, Hurley, J.H.
登録日2022-06-25
公開日2022-09-28
実験手法ELECTRON MICROSCOPY (3.53 Å)
主引用文献Structural basis for FLCN RagC GAP activation in MiT-TFE substrate-selective mTORC1 regulation.
Sci Adv, 8, 2022
6BA6
DownloadVisualize
BU of 6ba6 by Molmil
Solution structure of Rap1b/talin complex
分子名称: Ras-related protein Rap-1b, Talin-1
著者Zhu, L, Yang, J, Qin, J.
登録日2017-10-12
公開日2017-12-06
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献Structure of Rap1b bound to talin reveals a pathway for triggering integrin activation.
Nat Commun, 8, 2017
1PK1
DownloadVisualize
BU of 1pk1 by Molmil
Hetero SAM domain structure of Ph and Scm.
分子名称: Polyhomeotic-proximal chromatin protein, Sex comb on midleg CG9495-PA
著者Kim, C.A, Sawaya, M.R, Cascio, D, Kim, W, Bowie, J.U.
登録日2003-06-04
公開日2005-02-15
最終更新日2021-10-27
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Structural organization of a Sex-comb-on-midleg/polyhomeotic copolymer.
J.Biol.Chem., 280, 2005
1PK3
DownloadVisualize
BU of 1pk3 by Molmil
Scm SAM domain
分子名称: BETA-MERCAPTOETHANOL, Sex comb on midleg CG9495-PA
著者Kim, C.A, Sawaya, M.R, Cascio, D, Kim, W, Bowie, J.U.
登録日2003-06-04
公開日2005-02-15
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Structural organization of a Sex-comb-on-midleg/polyhomeotic copolymer.
J.Biol.Chem., 280, 2005
8DR7
DownloadVisualize
BU of 8dr7 by Molmil
Open state of RFC:PCNA bound to a nicked dsDNA
分子名称: DNA (26-MER), DNA (5'-D(P*AP*GP*GP*GP*GP*GP*GP*GP*GP*GP*G)-3'), DNA (5'-D(P*GP*GP*CP*CP*CP*CP*CP*CP*CP*GP*GP*C)-3'), ...
著者Schrecker, M, Hite, R.K.
登録日2022-07-20
公開日2022-08-17
最終更新日2024-02-14
実験手法ELECTRON MICROSCOPY (2.7 Å)
主引用文献Multistep loading of a DNA sliding clamp onto DNA by replication factor C.
Elife, 11, 2022
8DR6
DownloadVisualize
BU of 8dr6 by Molmil
Closed state of RFC:PCNA bound to a nicked dsDNA
分子名称: ADENOSINE-5'-DIPHOSPHATE, DNA (32-MER), DNA (5'-D(P*CP*CP*CP*CP*CP*CP*GP*GP*CP*CP*CP*CP*CP*CP*CP*GP*GP*C)-3'), ...
著者Schrecker, M, Hite, R.K.
登録日2022-07-20
公開日2022-08-24
最終更新日2024-02-14
実験手法ELECTRON MICROSCOPY (2.39 Å)
主引用文献Multistep loading of a DNA sliding clamp onto DNA by replication factor C.
Elife, 11, 2022
8R6H
DownloadVisualize
BU of 8r6h by Molmil
A quadruplex-duplex hybrid with a three-layered hybrid-2 G-quadruplex topology complexed with Phen-DC3
分子名称: DNA (34-MER), N2,N9-bis(1-methylquinolin-3-yl)-1,10-phenanthroline-2,9-dicarboxamide
著者Vianney, Y.M, Weisz, K.
登録日2023-11-22
公開日2024-03-06
最終更新日2024-07-10
実験手法SOLUTION NMR
主引用文献Structural Differences at Quadruplex-Duplex Interfaces Enable Ligand-Induced Topological Transitions.
Adv Sci, 11, 2024
8R6D
DownloadVisualize
BU of 8r6d by Molmil
A quadruplex-duplex hybrid with a three-layered hybrid-2 G-quadruplex topology
分子名称: DNA (31-MER)
著者Vianney, Y.M, Weisz, K.
登録日2023-11-22
公開日2024-03-06
最終更新日2024-07-10
実験手法SOLUTION NMR
主引用文献Structural Differences at Quadruplex-Duplex Interfaces Enable Ligand-Induced Topological Transitions.
Adv Sci, 11, 2024
6I15
DownloadVisualize
BU of 6i15 by Molmil
CRYSTAL STRUCTURE OF FASCIN IN COMPLEX WITH COMPOUND 11
分子名称: 1,2-ETHANEDIOL, 1-[[2,2-bis(fluoranyl)-1,3-benzodioxol-5-yl]methyl]-~{N}-methyl-2-oxidanylidene-pyridine-3-carboxamide, ACETATE ION, ...
著者Schuettelkopf, A.W.
登録日2018-10-27
公開日2019-02-27
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.91 Å)
主引用文献Structure-based design, synthesis and biological evaluation of a novel series of isoquinolone and pyrazolo[4,3-c]pyridine inhibitors of fascin 1 as potential anti-metastatic agents.
Bioorg.Med.Chem.Lett., 29, 2019
8C5V
DownloadVisualize
BU of 8c5v by Molmil
Chemotaxis core signalling unit from E protein lysed E. coli cells
分子名称: Chemotaxis protein CheA, Chemotaxis protein CheW, Methyl-accepting chemotaxis protein I
著者Cassidy, C.K, Qin, Z, Zhang, P.
登録日2023-01-10
公開日2023-09-13
最終更新日2023-11-29
実験手法ELECTRON MICROSCOPY (12 Å)
主引用文献Structure of the native chemotaxis core signaling unit from phage E-protein lysed E. coli cells.
Mbio, 14, 2023
8R6G
DownloadVisualize
BU of 8r6g by Molmil
A quadruplex-duplex hybrid with a three-layered chair G-quadruplex topology
分子名称: DNA (33-MER)
著者Vianney, Y.M, Weisz, K.
登録日2023-11-22
公開日2024-03-13
最終更新日2024-07-10
実験手法SOLUTION NMR
主引用文献Structural Differences at Quadruplex-Duplex Interfaces Enable Ligand-Induced Topological Transitions.
Adv Sci, 11, 2024

224004

件を2024-08-21に公開中

PDB statisticsPDBj update infoContact PDBjnumon