PDB: 1848 件ウェブページステータス検索Chemie searchBIRD

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6T8H	Cryo-EM structure of the DNA-bound PolD-PCNA processive complex from P. abyssi 分子名称: DNA polymerase II small subunit, DNA polymerase sliding clamp, DNA primer, ... 著者 Madru, C, Raia, P, Hugonneau Beaufet, I, Pehau-Arnaudet, G, England, P, Lindhal, E, Delarue, M, Carroni, M, Sauguet, L. 登録日 2019-10-24 公開日 2020-03-04 最終更新日 2020-04-08 実験手法 ELECTRON MICROSCOPY (3.77 Å) 主引用文献 Structural basis for the increased processivity of D-family DNA polymerases in complex with PCNA. Nat Commun, 11, 2020
3V7E	Crystal structure of YbxF bound to the SAM-I riboswitch aptamer 分子名称: COBALT HEXAMMINE(III), MAGNESIUM ION, Ribosome-associated protein L7Ae-like, ... 著者 Baird, N.J, Zhang, J, Hamma, T, Ferre-D'Amare, A.R. 登録日 2011-12-21 公開日 2012-03-07 最終更新日 2023-09-13 実験手法 X-RAY DIFFRACTION (2.8 Å) 主引用文献 YbxF and YlxQ are bacterial homologs of L7Ae and bind K-turns but not K-loops. Rna, 18, 2012
3NPQ	Structure of the S-adenosylhomocysteine riboswitch at 2.18 A 分子名称: COBALT HEXAMMINE(III), S-ADENOSYL-L-HOMOCYSTEINE, S-ADENOSYLHOMOCYSTEINE RIBOSWITCH 著者 Reyes, F.E, Edwards, A.E, Batey, R.T. 登録日 2010-06-28 公開日 2010-10-06 最終更新日 2023-09-06 実験手法 X-RAY DIFFRACTION (2.1814 Å) 主引用文献 Structural basis for recognition of S-adenosylhomocysteine by riboswitches. Rna, 16, 2010
1IK1	Solution Structure of an RNA Hairpin from HRV-14 分子名称: 5'-R(*GP*GP*UP*AP*CP*UP*AP*UP*GP*UP*AP*CP*CP*A)-3' 著者 Huang, H, Alexandrov, A, Chen, X, Barnes III, T.W, Zhang, H, Dutta, K, Pascal, S.M. 登録日 2001-05-01 公開日 2001-07-18 最終更新日 2024-05-01 実験手法 SOLUTION NMR 主引用文献 Structure of an RNA hairpin from HRV-14. Biochemistry, 40, 2001
1F85	SOLUTION STRUCTURE OF HCV IRES RNA DOMAIN IIIE 分子名称: HCV-1B IRES RNA DOMAIN IIIE 著者 Lukavsky, P.J, Otto, G.A, Lancaster, A.M, Sarnow, P, Puglisi, J.D. 登録日 2000-06-28 公開日 2000-11-17 最終更新日 2024-05-22 実験手法 SOLUTION NMR 主引用文献 Structures of two RNA domains essential for hepatitis C virus internal ribosome entry site function. Nat.Struct.Biol., 7, 2000
2NAX	Structure of CCHC zinc finger domain of Pcf11 分子名称: Protein PCF11, ZINC ION 著者 Yang, F, Varani, G. 登録日 2016-01-12 公開日 2016-11-23 最終更新日 2024-05-15 実験手法 SOLUTION NMR 主引用文献 The C terminus of Pcf11 forms a novel zinc-finger structure that plays an essential role in mRNA 3'-end processing. RNA, 23, 2017
1F84	SOLUTION STRUCTURE OF HCV IRES RNA DOMAIN IIID 分子名称: HCV-1B IRES RNA DOMAIN IIID 著者 Lukavsky, P.J, Otto, G.A, Lancaster, A.M, Sarnow, P, Puglisi, J.D. 登録日 2000-06-28 公開日 2000-11-17 最終更新日 2024-05-22 実験手法 SOLUTION NMR 主引用文献 Structures of two RNA domains essential for hepatitis C virus internal ribosome entry site function. Nat.Struct.Biol., 7, 2000
2YN2	Huf protein - paralogue of the tau55 histidine phosphatase domain 分子名称: FORMIC ACID, UNCHARACTERIZED PROTEIN YNL108C 著者 Taylor, N.M.I, Glatt, S, Hennrich, M, von Scheven, G, Grotsch, H, Fernandez-Tornero, C, Rybin, V, Gavin, A.C, Kolb, P, Muller, C.W. 登録日 2012-10-11 公開日 2013-04-03 最終更新日 2023-12-20 実験手法 X-RAY DIFFRACTION (2.05 Å) 主引用文献 Structural and Functional Characterization of a Phosphatase Domain within Yeast General Transcription Factor Tfiiic. J.Biol.Chem., 288, 2013
1IDV	NMR structure of HCV ires RNA domain IIIC 分子名称: HEPATITIS C IRES RNA DOMAIN IIIC 著者 Kaluarachchi, K, Rijnbrand, R, Lemon, S.M, Gorenstein, D.G. 登録日 2001-04-05 公開日 2001-10-05 最終更新日 2024-05-22 実験手法 SOLUTION NMR 主引用文献 Mutational and structural analysis of stem-loop IIIC of the hepatitis C virus and GB virus B internal ribosome entry sites J.Mol.Biol., 343, 2004
2MT4	Solution structure of the N-terminal domain of NUSA from B. Subtilis 分子名称: Transcription termination/antitermination protein NusA 著者 Mobli, M, Lewis, P.J. 登録日 2014-08-12 公開日 2015-02-18 最終更新日 2024-05-15 実験手法 SOLUTION NMR 主引用文献 RNA polymerase-induced remodelling of NusA produces a pause enhancement complex. Nucleic Acids Res., 43, 2015
2LLI	Low resolution structure of RNA-binding subunit of the TRAMP complex 分子名称: Protein AIR2, ZINC ION 著者 Holub, P, Lalakova, J, Cerna, H, Sarazova, M, Pasulka, J, Hrazdilova, K, Arce, M.S, Stefl, R, Vanacova, S. 登録日 2011-11-10 公開日 2012-03-21 最終更新日 2024-05-15 実験手法 SOLUTION NMR 主引用文献 Air2p is critical for the assembly and RNA-binding of the TRAMP complex and the KOW domain of Mtr4p is crucial for exosome activation. Nucleic Acids Res., 40, 2012
5VVR	Ternary complex of RNA Pol II, transcription scaffold and Rad26 分子名称: DNA (NTS), DNA (TS), DNA repair and recombination protein RAD26, ... 著者 Lahiri, I, Leschziner, A.E. 登録日 2017-05-19 公開日 2017-11-22 最終更新日 2024-03-13 実験手法 ELECTRON MICROSCOPY (5.8 Å) 主引用文献 Structural basis for the initiation of eukaryotic transcription-coupled DNA repair. Nature, 551, 2017
6DRD	RNA Pol II(G) 分子名称: DNA-directed RNA polymerase II subunit GRINL1A, DNA-directed RNA polymerase II subunit RPB1, DNA-directed RNA polymerase II subunit RPB11-a, ... 著者 Yu, X, Jishage, M, Shi, Y, Ganesan, S, Sali, A, Chait, B.T, Asturias, F, Roeder, R.G. 登録日 2018-06-11 公開日 2019-06-12 最終更新日 2019-12-04 実験手法 ELECTRON MICROSCOPY (3.9 Å) 主引用文献 Architecture of Pol II(G) and molecular mechanism of transcription regulation by Gdown1. Nat. Struct. Mol. Biol., 25, 2018
5VVS	RNA pol II elongation complex 分子名称: DNA (NTS), DNA (TS), DNA-directed RNA polymerase II subunit RPB1, ... 著者 Lahiri, I, Leschziner, A.E. 登録日 2017-05-20 公開日 2017-11-22 最終更新日 2024-03-13 実験手法 ELECTRON MICROSCOPY (6.4 Å) 主引用文献 Structural basis for the initiation of eukaryotic transcription-coupled DNA repair. Nature, 551, 2017
8CLK	TFIIIC TauA complex 分子名称: General transcription factor 3C polypeptide 1, General transcription factor 3C polypeptide 3, General transcription factor 3C polypeptide 5, ... 著者 Seifert-Davila, W, Girbig, M, Hauptmann, L, Hoffmann, T, Eustermann, S, Mueller, C.W. 登録日 2023-02-16 公開日 2023-06-21 最終更新日 2023-07-19 実験手法 ELECTRON MICROSCOPY (3.5 Å) 主引用文献 Structural insights into human TFIIIC promoter recognition. Sci Adv, 9, 2023
8CLJ	TFIIIC TauB-DNA dimer 分子名称: General transcription factor 3C polypeptide 1, General transcription factor 3C polypeptide 2, General transcription factor 3C polypeptide 4, ... 著者 Seifert-Davila, W, Girbig, M, Hauptmann, L, Hoffmann, T, Eustermann, S, Mueller, C.W. 登録日 2023-02-16 公開日 2023-06-21 最終更新日 2023-07-19 実験手法 ELECTRON MICROSCOPY (3.2 Å) 主引用文献 Structural insights into human TFIIIC promoter recognition. Sci Adv, 9, 2023
8CLI	TFIIIC TauB-DNA monomer 分子名称: DNA (35-MER), General transcription factor 3C polypeptide 1, General transcription factor 3C polypeptide 2, ... 著者 Seifert-Davila, W, Girbig, M, Hauptmann, L, Hoffmann, T, Eustermann, S, Mueller, C.W. 登録日 2023-02-16 公開日 2023-06-21 最終更新日 2023-07-19 実験手法 ELECTRON MICROSCOPY (3.2 Å) 主引用文献 Structural insights into human TFIIIC promoter recognition. Sci Adv, 9, 2023
8FMA	Nodavirus RNA replication proto-crown, detergent-solubliized C11 multimer 分子名称: RNA-directed RNA polymerase 著者 Zhan, H, Unchwaniwala, N, Rebolledo Viveros, A, Pennington, J, Horswill, M, Broadberry, R, Myers, J, den Boon, J, Grant, T, Ahlquist, P. 登録日 2022-12-22 公開日 2023-02-01 最終更新日 2024-06-19 実験手法 ELECTRON MICROSCOPY (3.1 Å) 主引用文献 Nodavirus RNA replication crown architecture reveals proto-crown precursor and viral protein A conformational switching. Proc.Natl.Acad.Sci.USA, 120, 2023
8FM9	Nodavirus RNA replication proto-crown, detergent-solubliized C12 multimer 分子名称: RNA-directed RNA polymerase 著者 Zhan, H, Unchwaniwala, N, Rebolledo Viveros, A, Pennington, J, Horswill, M, Broadberry, R, Myers, J, den Boon, J, Grant, T, Ahlquist, P. 登録日 2022-12-22 公開日 2023-02-01 最終更新日 2024-06-19 実験手法 ELECTRON MICROSCOPY (3.2 Å) 主引用文献 Nodavirus RNA replication crown architecture reveals proto-crown precursor and viral protein A conformational switching. Proc.Natl.Acad.Sci.USA, 120, 2023
8FMB	Nodavirus RNA replication protein A polymerase domain, local refinement 分子名称: RNA-directed RNA polymerase 著者 Zhan, H, Unchwaniwala, N, Rebolledo Viveros, A, Pennington, J, Horswill, M, Broadberry, R, Myers, J, den Boon, J, Grant, T, Ahlquist, P. 登録日 2022-12-22 公開日 2023-02-01 最終更新日 2024-06-19 実験手法 ELECTRON MICROSCOPY (6.3 Å) 主引用文献 Nodavirus RNA replication crown architecture reveals proto-crown precursor and viral protein A conformational switching. Proc.Natl.Acad.Sci.USA, 120, 2023
3OTE	Crystal structure of human tRNAHis guanylyltransferase (Thg1)- Native I 分子名称: tRNA(His) guanylyltransferase 著者 Hyde, S.J, Eckenroth, B.E, Doublie, S. 登録日 2010-09-11 公開日 2010-11-17 最終更新日 2024-02-21 実験手法 X-RAY DIFFRACTION (2.56 Å) 主引用文献 tRNAHis guanylyltransferase (THG1), a unique 3'-5' nucleotidyl transferase, shares unexpected structural homology with canonical 5'-3' DNA polymerases. Proc.Natl.Acad.Sci.USA, 107, 2010
3OTC	Crystal structure of human tRNAHis guanylyltransferase (Thg1)- Native II 分子名称: tRNA(His) guanylyltransferase 著者 Hyde, S.J, Eckenroth, B.E, Doublie, S. 登録日 2010-09-11 公開日 2010-11-17 最終更新日 2024-02-21 実験手法 X-RAY DIFFRACTION (3.01 Å) 主引用文献 tRNAHis guanylyltransferase (THG1), a unique 3'-5' nucleotidyl transferase, shares unexpected structural homology with canonical 5'-3' DNA polymerases. Proc.Natl.Acad.Sci.USA, 107, 2010
2JWV	Structure of a high affinity anti-NFkB RNA aptamer 分子名称: RNA (29-MER) 著者 Reiter, N.J, Maher III, L, Butcher, S.E. 登録日 2007-10-25 公開日 2008-01-08 最終更新日 2024-05-01 実験手法 SOLUTION NMR 主引用文献 DNA mimicry by a high-affinity anti-NF-kappaB RNA aptamer Nucleic Acids Res., 36, 2008
7XUR	The cryo-EM structure of human mini-SNAPc in complex with hU6-1 PSE 分子名称: DNA (35-MER), ZINC ION, snRNA-activating protein complex subunit 1, ... 著者 Wang, W, Sun, J.F. 登録日 2022-05-19 公開日 2022-12-07 最終更新日 2024-07-03 実験手法 ELECTRON MICROSCOPY (3.49 Å) 主引用文献 Structural basis of human SNAPc recognizing proximal sequence element of snRNA promoter. Nat Commun, 13, 2022
7Y9Y	Structure of the Cas7-11-Csx29-guide RNA-target RNA (no PFS) complex 分子名称: CHAT domain-containing protein, CRISPR-associated RAMP family protein, RNA (27-MER), ... 著者 Kato, K, Okazaki, S, Ishikawa, J, Isayama, Y, Nishizawa, T, Nishimasu, H. 登録日 2022-06-26 公開日 2022-11-09 最終更新日 2024-07-03 実験手法 ELECTRON MICROSCOPY (2.77 Å) 主引用文献 RNA-triggered protein cleavage and cell growth arrest by the type III-E CRISPR nuclease-protease. Science, 378, 2022

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