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4BPB
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STRUCTURAL INSIGHTS INTO RNA RECOGNITION BY RIG-I
分子名称: 5'-R(*GP*CP*GP*CP*GP*CP*GP*CP*GP*CP)-3', PROBABLE ATP-DEPENDENT RNA HELICASE DDX58, SULFATE ION, ...
著者Luo, D, Pyle, A.M.
登録日2013-05-23
公開日2013-06-19
実験手法X-RAY DIFFRACTION (2.584 Å)
主引用文献Structural Insights Into RNA Recognition by Rig-I.
Cell(Cambridge,Mass.), 147, 2011
4BGD
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BU of 4bgd by Molmil
Crystal structure of Brr2 in complex with the Jab1/MPN domain of Prp8
分子名称: 3,6,9,12,15,18,21,24-OCTAOXAHEXACOSAN-1-OL, ADENOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, ...
著者Nguyen, T.H.D, Li, J, Nagai, K.
登録日2013-03-25
公開日2013-05-29
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (3.1 Å)
主引用文献Structural Basis of Brr2-Prp8 Interactions and Implications for U5 Snrnp Biogenesis and the Spliceosome Active Site
Structure, 21, 2013
4AY2
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BU of 4ay2 by Molmil
Capturing 5' tri-phosphorylated RNA duplex by RIG-I
分子名称: 5'-R-PPP(GP*GP*CP*GP*CP*GP*GP*CP*UP*UP*CP*GP*GP*CP *CP*GP*CP*GP*CP*C)-3', ADENOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, ...
著者Luo, D, Pyle, A.M.
登録日2012-06-17
公開日2012-10-03
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Visualizing the Determinants of Viral RNA Recognition by Innate Immune Sensor Rig-I.
Structure, 20, 2012
4A4Z
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BU of 4a4z by Molmil
CRYSTAL STRUCTURE OF THE S. CEREVISIAE DEXH HELICASE SKI2 BOUND TO AMPPNP
分子名称: 1,2-ETHANEDIOL, ANTIVIRAL HELICASE SKI2, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER
著者Halbach, F, Rode, M, Conti, E.
登録日2011-10-20
公開日2011-12-21
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献The Crystal Structure of S. Cerevisiae Ski2, a Dexh Helicase Associated with the Cytoplasmic Functions of the Exosome.
RNA, 18, 2012
4A4D
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BU of 4a4d by Molmil
Crystal structure of the N-terminal domain of the Human DEAD-BOX RNA helicase DDX5 (P68)
分子名称: PROBABLE ATP-DEPENDENT RNA HELICASE DDX5
著者Dutta, S, Choi, Y.W, Kotaka, M, Fielding, B.C, Tan, Y.J.
登録日2011-10-11
公開日2012-08-08
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献The Variable N-Terminal Region of Ddx5 Contains Structural Elements and Auto-Inhibits its Interaction with Ns5B of Hepatitis C Virus.
Biochem.J., 446, 2012
4A36
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BU of 4a36 by Molmil
Structure of duck RIG-I helicase domain bound to 19-mer dsRNA and ATP transition state analogue
分子名称: 5'-R(*GP*CP*AP*UP*GP*CP*GP*AP*CP*CP*UP*CP*UP*GP *UP*UP*UP*GP*A)-3', 5'-R(*UP*CP*AP*AP*AP*CP*AP*GP*AP*GP*GP*UP*CP*GP *CP*AP*UP*GP*C)-3', ADENOSINE-5'-DIPHOSPHATE, ...
著者Kowalinski, E, Lunardi, T, McCarthy, A.A, Cusack, S.
登録日2011-09-30
公開日2011-10-19
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (3.7 Å)
主引用文献Structural Basis for the Activation of Innate Immune Pattern Recognition Receptor Rig-I by Viral RNA.
Cell(Cambridge,Mass.), 147, 2011
4A2W
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Structure of full-length duck RIG-I
分子名称: RETINOIC ACID INDUCIBLE PROTEIN I
著者Kowalinski, E, Lunardi, T, McCarthy, A.A, Cusack, S.
登録日2011-09-29
公開日2011-10-19
最終更新日2024-05-01
実験手法X-RAY DIFFRACTION (3.7 Å)
主引用文献Structural Basis for the Activation of Innate Immune Pattern Recognition Receptor Rig-I by Viral RNA.
Cell(Cambridge,Mass.), 147, 2011
4A2Q
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Structure of duck RIG-I tandem CARDs and helicase domain
分子名称: RETINOIC ACID INDUCIBLE PROTEIN I
著者Kowalinski, E, Lunardi, T, McCarthy, A.A, Cusack, S.
登録日2011-09-28
公開日2011-10-19
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (3.4 Å)
主引用文献Structural Basis for the Activation of Innate Immune Pattern Recognition Receptor Rig-I by Viral RNA.
Cell(Cambridge,Mass.), 147, 2011
4A2P
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BU of 4a2p by Molmil
Structure of duck RIG-I helicase domain
分子名称: RETINOIC ACID INDUCIBLE PROTEIN I
著者Kowalinski, E, Lunardi, T, McCarthy, A.A, Cusack, S.
登録日2011-09-28
公開日2011-10-19
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Structural Basis for the Activation of Innate Immune Pattern Recognition Receptor Rig-I by Viral RNA.
Cell(Cambridge,Mass.), 147, 2011
3ZD7
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BU of 3zd7 by Molmil
Snapshot 3 of RIG-I scanning on RNA duplex
分子名称: ADENOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, PROBABLE ATP-DEPENDENT RNA HELICASE DDX58, ...
著者Luo, D, Pyle, A.M.
登録日2012-11-25
公開日2013-08-07
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Defining the Functional Determinants for RNA Surveillance by Rig-I.
Embo Rep., 14, 2013
3ZD6
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BU of 3zd6 by Molmil
Snapshot 1 of RIG-I scanning on RNA duplex
分子名称: PROBABLE ATP-DEPENDENT RNA HELICASE DDX58, RNA DUPLEX, ZINC ION
著者Luo, D, Pyle, A.M.
登録日2012-11-25
公開日2013-08-07
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Defining the Functional Determinants for RNA Surveillance by Rig-I.
Embo Rep., 14, 2013
3TBK
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BU of 3tbk by Molmil
Mouse RIG-I ATPase Domain
分子名称: 1,2-ETHANEDIOL, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, RIG-I Helicase Domain
著者Civril, F, Bennett, M.D, Hopfner, K.-P.
登録日2011-08-07
公開日2011-10-26
最終更新日2017-11-08
実験手法X-RAY DIFFRACTION (2.14 Å)
主引用文献The RIG-I ATPase domain structure reveals insights into ATP-dependent antiviral signalling.
Embo Rep., 12, 2011
3SQX
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BU of 3sqx by Molmil
Structure of Mss116p (NTE and C-tail double deletion) bound to ssRNA and AMP-PNP
分子名称: ATP-dependent RNA helicase MSS116, mitochondrial, MAGNESIUM ION, ...
著者Del Campo, M, Lambowitz, A.M.
登録日2011-07-06
公開日2011-10-12
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2.112 Å)
主引用文献High-Throughput Genetic Identification of Functionally Important Regions of the Yeast DEAD-Box Protein Mss116p.
J.Mol.Biol., 413, 2011
3SQW
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BU of 3sqw by Molmil
Structure of Mss116p (NTE deletion) bound to ssRNA and AMP-PNP
分子名称: ATP-dependent RNA helicase MSS116, mitochondrial, MAGNESIUM ION, ...
著者Del Campo, M, Lambowitz, A.M.
登録日2011-07-06
公開日2011-10-12
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (1.909 Å)
主引用文献High-Throughput Genetic Identification of Functionally Important Regions of the Yeast DEAD-Box Protein Mss116p.
J.Mol.Biol., 413, 2011
3RRN
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BU of 3rrn by Molmil
S. cerevisiae dbp5 l327v bound to gle1 h337r and ip6
分子名称: ADENOSINE-5'-DIPHOSPHATE, ATP-dependent RNA helicase DBP5, INOSITOL HEXAKISPHOSPHATE, ...
著者Montpetit, B, Thomsen, N.D, Helmke, K.J, Seeliger, M.A, Berger, J.M, Weis, K.
登録日2011-04-29
公開日2011-05-18
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (4.001 Å)
主引用文献A conserved mechanism of DEAD-box ATPase activation by nucleoporins and InsP6 in mRNA export.
Nature, 472, 2011
3RRM
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BU of 3rrm by Molmil
S. cerevisiae dbp5 l327v bound to nup159, gle1 h337r, ip6 and adp
分子名称: ADENOSINE-5'-DIPHOSPHATE, ATP-dependent RNA helicase DBP5, INOSITOL HEXAKISPHOSPHATE, ...
著者Montpetit, B, Thomsen, N.D, Helmke, K.J, Seeliger, M.A, Berger, J.M, Weis, K.
登録日2011-04-29
公開日2011-05-18
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献A conserved mechanism of DEAD-box ATPase activation by nucleoporins and InsP6 in mRNA export.
Nature, 472, 2011
3PEY
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BU of 3pey by Molmil
S. cerevisiae Dbp5 bound to RNA and ADP BeF3
分子名称: ADENOSINE-5'-DIPHOSPHATE, ATP-dependent RNA helicase DBP5, BERYLLIUM TRIFLUORIDE ION, ...
著者Montpetit, B, Thomsen, N.D, Helmke, K.J, Seeliger, M.A, Berger, J.M, Weis, K.
登録日2010-10-27
公開日2011-03-23
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (1.401 Å)
主引用文献A conserved mechanism of DEAD-box ATPase activation by nucleoporins and InsP(6) in mRNA export.
Nature, 472, 2011
3PEW
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BU of 3pew by Molmil
S. cerevisiae Dbp5 L327V bound to RNA and ADP BeF3
分子名称: ADENOSINE-5'-DIPHOSPHATE, ATP-dependent RNA helicase DBP5, BERYLLIUM TRIFLUORIDE ION, ...
著者Montpetit, B, Thomsen, N.D, Helmke, K.J, Seeliger, M.A, Berger, J.M, Weis, K.
登録日2010-10-27
公開日2011-03-23
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (1.501 Å)
主引用文献A conserved mechanism of DEAD-box ATPase activation by nucleoporins and InsP(6) in mRNA export.
Nature, 472, 2011
3P4Y
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BU of 3p4y by Molmil
Helicase domain of reverse gyrase from Thermotoga maritima - P2 form
分子名称: reverse gyrase helicase domain
著者Rudolph, M.G, Klostermeier, D.
登録日2010-10-07
公開日2011-06-15
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (3.2 Å)
主引用文献The Conformational Flexibility of the Helicase-like Domain from Thermotoga maritima Reverse Gyrase Is Restricted by the Topoisomerase Domain.
Biochemistry, 50, 2011
3P4X
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Helicase domain of reverse gyrase from Thermotoga maritima
分子名称: ADENOSINE-5'-DIPHOSPHATE, CHLORIDE ION, MAGNESIUM ION, ...
著者Rudolph, M.G, Klostermeier, D.
登録日2010-10-07
公開日2011-06-15
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2.41 Å)
主引用文献The Conformational Flexibility of the Helicase-like Domain from Thermotoga maritima Reverse Gyrase Is Restricted by the Topoisomerase Domain.
Biochemistry, 50, 2011
3OIY
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BU of 3oiy by Molmil
Helicase domain of reverse gyrase from Thermotoga maritima
分子名称: CHLORIDE ION, PYROPHOSPHATE 2-, reverse gyrase helicase domain
著者Rudolph, M.G, Klostermeier, D.
登録日2010-08-20
公開日2010-12-01
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2.35 Å)
主引用文献The latch modulates nucleotide and DNA binding to the helicase-like domain of Thermotoga maritima reverse gyrase and is required for positive DNA supercoiling.
Nucleic Acids Res., 39, 2011
3NEJ
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BU of 3nej by Molmil
Q28E mutant of Hera RNA helicase N-terminal domain - perfectly twinned hexagonal form
分子名称: Heat resistant RNA dependent ATPase
著者Rudolph, M.G.
登録日2010-06-09
公開日2011-04-27
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.57 Å)
主引用文献Changing nucleotide specificity of the DEAD-box helicase Hera abrogates communication between the Q-motif and the P-loop.
Biol.Chem., 392, 2011
3NBF
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Q28E mutant of hera helicase N-terminal domain bound to 8-oxo-ADP
分子名称: Heat resistant RNA dependent ATPase, [(2R,3S,4R,5R)-5-(6-azanyl-8-oxo-7H-purin-9-yl)-3,4-dihydroxy-oxolan-2-yl]methyl dihydrogen phosphate, [(2R,3S,4R,5R)-5-(6-azanyl-8-oxo-7H-purin-9-yl)-3,4-dihydroxy-oxolan-2-yl]methyl phosphono hydrogen phosphate
著者Rudolph, M.G, Klostermeier, D.
登録日2010-06-03
公開日2011-03-23
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Changing nucleotide specificity of the DEAD-box helicase Hera abrogates communication between the Q-motif and the P-loop.
Biol.Chem., 392, 2011
3MWL
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BU of 3mwl by Molmil
Q28E mutant of HERA N-terminal RecA-like domain in complex with 8-OXOADENOSINE
分子名称: 6-azanyl-9-[(2R,3R,4S,5R)-3,4-dihydroxy-5-(hydroxymethyl)oxolan-2-yl]-7H-purin-8-one, Heat resistant RNA dependent ATPase, SULFATE ION
著者Rudolph, M.G, Klostermeier, D.
登録日2010-05-06
公開日2011-03-23
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Changing nucleotide specificity of the DEAD-box helicase Hera abrogates communication between the Q-motif and the P-loop.
Biol.Chem., 392, 2011
3MWK
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Q28E mutant of HERA N-terminal RecA-like domain, complex with 8-oxo-AMP
分子名称: Heat resistant RNA dependent ATPase, SULFATE ION, [(2R,3S,4R,5R)-5-(6-azanyl-8-oxo-7H-purin-9-yl)-3,4-dihydroxy-oxolan-2-yl]methyl dihydrogen phosphate
著者Rudolph, M.G, Klostermeier, D.
登録日2010-05-06
公開日2011-03-23
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.45 Å)
主引用文献Changing nucleotide specificity of the DEAD-box helicase Hera abrogates communication between the Q-motif and the P-loop.
Biol.Chem., 392, 2011

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