Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

5E2E
DownloadVisualize
BU of 5e2e by Molmil
Crystal Structure of Beta-lactamase Precursor BlaA from Yersinia enterocolitica
分子名称: Beta-lactamase
著者Kim, Y, Joachimiak, G, Endres, M, Babnigg, G, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
登録日2015-10-01
公開日2015-10-28
最終更新日2022-04-13
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Crystal Structure of Beta-lactamase Precursor BlaA from Yersinia enterocolitica
To Be Published
5CHU
DownloadVisualize
BU of 5chu by Molmil
CRYSTAL STRUCTURE OF Fox-4 cephamycinase complexed with sulfate
分子名称: ACETATE ION, Beta-lactamase, SULFATE ION, ...
著者Malashkevich, V.N, Toro, R, Lefurgy, S, Almo, S.C.
登録日2015-07-10
公開日2016-08-03
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.1 Å)
主引用文献CRYSTAL STRUCTURE OF Fox-4 cephamycinase complexed with sulfate
To Be Published
5CHM
DownloadVisualize
BU of 5chm by Molmil
CRYSTAL STRUCTURE OF Fox-4 cephamycinase complexed with ceftazidime BATSI (LP06)
分子名称: ACETATE ION, Beta-lactamase, PINACOL[[2-AMINO-ALPHA-(1-CARBOXY-1-METHYLETHOXYIMINO)-4-THIAZOLEACETYL]AMINO]METHANEBORONATE, ...
著者Malashkevich, V.N, Toro, R, Lefurgy, S, Almo, S.C.
登録日2015-07-10
公開日2016-08-03
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Structures of FOX-4 Cephamycinase in Complex with Transition-State Analog Inhibitors.
Biomolecules, 10, 2020
5CHJ
DownloadVisualize
BU of 5chj by Molmil
CRYSTAL STRUCTURE OF Fox-4 cephamycinase complexed with cephalothin BATSI (SM23)
分子名称: (1R)-1-(2-THIENYLACETYLAMINO)-1-(3-CARBOXYPHENYL)METHYLBORONIC ACID, ACETATE ION, Beta-lactamase, ...
著者Malashkevich, V.N, Toro, R, Lefurgy, S, Almo, S.C.
登録日2015-07-10
公開日2016-08-03
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.358 Å)
主引用文献Structures of FOX-4 Cephamycinase in Complex with Transition-State Analog Inhibitors.
Biomolecules, 10, 2020
5CGX
DownloadVisualize
BU of 5cgx by Molmil
CRYSTAL STRUCTURE OF Fox-4 cephamycinase mutant Y150F complexed with cefoxitin
分子名称: (2R)-2-{(1S)-1-methoxy-2-oxo-1-[(thiophen-2-ylacetyl)amino]ethyl}-5-methylidene-5,6-dihydro-2H-1,3-thiazine-4-carboxylic acid, Beta-lactamase, SODIUM ION, ...
著者Malashkevich, V.N, Toro, R, Lefurgy, S, Almo, S.C.
登録日2015-07-09
公開日2016-02-03
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.21 Å)
主引用文献FOX-4 cephamycinase: an analysis of structure and function.
Antimicrob.Agents Chemother., 2015
5CGW
DownloadVisualize
BU of 5cgw by Molmil
CRYSTAL STRUCTURE OF Fox-4 cephamycinase mutant Y150F
分子名称: ACETATE ION, Beta-lactamase, ZINC ION
著者Malashkevich, V.N, Toro, R, Lefurgy, S, Almo, S.C.
登録日2015-07-09
公開日2016-02-03
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献FOX-4 cephamycinase: an analysis of structure and function.
Antimicrob.Agents Chemother., 2015
5CGS
DownloadVisualize
BU of 5cgs by Molmil
CRYSTAL STRUCTURE OF Fox-4 cephamycinase
分子名称: Beta-lactamase, ZINC ION
著者Malashkevich, V.N, Toro, R, Lefurgy, S, Almo, S.C.
登録日2015-07-09
公開日2016-02-03
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.634 Å)
主引用文献FOX-4 cephamycinase: an analysis of structure and function.
Antimicrob.Agents Chemother., 2015
5A93
DownloadVisualize
BU of 5a93 by Molmil
293K Joint X-ray Neutron with Cefotaxime: EXPLORING THE MECHANISM OF BETA-LACTAM RING PROTONATION IN THE CLASS A BETA-LACTAMASE ACYLATION MECHANISM USING NEUTRON AND X-RAY CRYSTALLOGRAPHY
分子名称: BETA-LACTAMASE CTX-M-97, CEFOTAXIME, C3' cleaved, ...
著者Vandavasi, V.G, Weiss, K.L, Cooper, J.B, Erskine, P.T, Tomanicek, S.J, Ostermann, A, Schrader, T.E, Ginell, S.L, Coates, L.
登録日2015-07-17
公開日2015-12-16
最終更新日2024-10-09
実験手法NEUTRON DIFFRACTION (1.598 Å), X-RAY DIFFRACTION
主引用文献Exploring the Mechanism of Beta-Lactam Ring Protonation in the Class a Beta-Lactamase Acylation Mechanism Using Neutron and X-Ray Crystallography.
J.Med.Chem., 59, 2016
5A92
DownloadVisualize
BU of 5a92 by Molmil
15K X-ray structure with Cefotaxime: Exploring the Mechanism of beta- Lactam Ring Protonation in the Class A beta-lactamase Acylation Mechanism Using Neutron and X-ray Crystallography
分子名称: BETA-LACTAMASE CTX-M-97, CEFOTAXIME, C3' cleaved, ...
著者Vandavasi, V.G, Weiss, K.L, Cooper, J.B, Erskine, P.T, Tomanicek, S.J, Ostermann, A, Schrader, T.E, Ginell, S.L, Coates, L.
登録日2015-07-17
公開日2015-12-16
最終更新日2018-10-03
実験手法X-RAY DIFFRACTION (1.05 Å)
主引用文献Exploring the Mechanism of Beta-Lactam Ring Protonation in the Class a Beta-Lactamase Acylation Mechanism Using Neutron and X-Ray Crystallography.
J.Med.Chem., 59, 2016
5A91
DownloadVisualize
BU of 5a91 by Molmil
15K X-ray ligand free: Exploring the Mechanism of beta-Lactam Ring Protonation in the Class A beta-lactamase Acylation Mechanism Using Neutron and X-ray Crystallography
分子名称: Beta-lactamase Toho-1, SULFATE ION
著者Vandavasi, V.G, Weiss, K.L, Cooper, J.B, Erskine, P.T, Tomanicek, S.J, Ostermann, A, Schrader, T.E, Ginell, S.L, Coates, L.
登録日2015-07-17
公開日2015-12-16
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (1.2 Å)
主引用文献Exploring the Mechanism of Beta-Lactam Ring Protonation in the Class a Beta-Lactamase Acylation Mechanism Using Neutron and X-Ray Crystallography.
J.Med.Chem., 59, 2016
5A90
DownloadVisualize
BU of 5a90 by Molmil
100K Neutron Ligand Free: Exploring the Mechanism of beta-Lactam Ring Protonation in the Class A beta-lactamase Acylation Mechanism Using Neutron and X-ray Crystallography
分子名称: BETA-LACTAMASE CTX-M-97
著者Vandavasi, V.G, Weiss, K.L, Cooper, J.B, Erskine, P.T, Tomanicek, S.J, Ostermann, A, Schrader, T.E, Ginell, S.L, Coates, L.
登録日2015-07-17
公開日2015-12-16
最終更新日2024-05-08
実験手法NEUTRON DIFFRACTION (1.7 Å)
主引用文献Exploring the Mechanism of Beta-Lactam Ring Protonation in the Class a Beta-Lactamase Acylation Mechanism Using Neutron and X-Ray Crystallography.
J.Med.Chem., 59, 2016
4ZJ3
DownloadVisualize
BU of 4zj3 by Molmil
Crystal structure of cephalexin bound acyl-enzyme intermediate of Val216AcrF mutant TEM1 beta-lactamase from Escherichia coli: E166N and V216AcrF mutant.
分子名称: Beta-lactamase TEM
著者Xiao, H, Nasertorabi, F, Choi, S, Han, G.W, Reed, S.A, Stevens, R.C, Schultz, P.G.
登録日2015-04-29
公開日2015-05-20
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Exploring the potential impact of an expanded genetic code on protein function.
Proc.Natl.Acad.Sci.USA, 112, 2015
4ZJ2
DownloadVisualize
BU of 4zj2 by Molmil
Crystal Structure of p-acrylamido-phenylalanine modified TEM1 beta-lactamase from Escherichia coli :E166N mutant
分子名称: Beta-lactamase TEM
著者Xiao, H, Nasertorabi, F, Choi, S, Han, G.W, Reed, S.A, Stevens, C.S, Schultz, P.G.
登録日2015-04-28
公開日2015-05-20
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Exploring the potential impact of an expanded genetic code on protein function.
Proc.Natl.Acad.Sci.USA, 112, 2015
4ZJ1
DownloadVisualize
BU of 4zj1 by Molmil
Crystal Structure of p-acrylamido-phenylalanine modified TEM1 beta-lactamase from Escherichia coli : V216AcrF mutant
分子名称: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, Beta-lactamase TEM, DI(HYDROXYETHYL)ETHER, ...
著者Xiao, H, Nasertorabi, F, Choi, S, Han, G.W, Reed, S.A, Stevens, R.C, Schultz, P.G.
登録日2015-04-28
公開日2015-05-20
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.54 Å)
主引用文献Exploring the potential impact of an expanded genetic code on protein function.
Proc.Natl.Acad.Sci.USA, 112, 2015
4ZBE
DownloadVisualize
BU of 4zbe by Molmil
Crystal structure of KPC-2 beta-lactamase complexed with avibactam
分子名称: (2S,5R)-1-formyl-5-[(sulfooxy)amino]piperidine-2-carboxamide, CITRIC ACID, Carbapenem-hydrolyzing beta-lactamase KPC
著者Nguyen, N.Q, van den Akker, F.
登録日2015-04-14
公開日2016-01-27
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Inhibition of Klebsiella beta-Lactamases (SHV-1 and KPC-2) by Avibactam: A Structural Study.
Plos One, 10, 2015
4ZAM
DownloadVisualize
BU of 4zam by Molmil
Crystal structure of SHV-1 beta-lactamase bound to avibactam
分子名称: (2S,5R)-1-formyl-5-[(sulfooxy)amino]piperidine-2-carboxamide, Beta-lactamase SHV-1, CYCLOHEXYL-HEXYL-BETA-D-MALTOSIDE
著者Krishnan, N, van den Akker, F.
登録日2015-04-13
公開日2016-01-27
実験手法X-RAY DIFFRACTION (1.42 Å)
主引用文献Inhibition of Klebsiella beta-Lactamases (SHV-1 and KPC-2) by Avibactam: A Structural Study.
Plos One, 10, 2015
4YFM
DownloadVisualize
BU of 4yfm by Molmil
Class A beta-lactamase from Mycobacterium abscessus
分子名称: ACETATE ION, Beta-lactamase, GLYCEROL
著者Soroka, D, Li de la Sierra-Gallay, I, Dubee, V, van Tilbeurgh, H, Arthur, M.
登録日2015-02-25
公開日2015-07-22
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献Hydrolysis of Clavulanate by Mycobacterium tuberculosis beta-Lactamase BlaC Harboring a Canonical SDN Motif.
Antimicrob.Agents Chemother., 59, 2015
4Y7P
DownloadVisualize
BU of 4y7p by Molmil
Structure of alkaline D-peptidase from Bacillus cereus
分子名称: Alkaline D-peptidase, THIOCYANATE ION
著者Nakano, S, Okazaki, S, Ishitsubo, E, Kawahara, N, Komeda, H, Tokiwa, H, Asano, Y.
登録日2015-02-15
公開日2015-10-14
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Structural and computational analysis of peptide recognition mechanism of class-C type penicillin binding protein, alkaline D-peptidase from Bacillus cereus DF4-B
Sci Rep, 5, 2015
4XXR
DownloadVisualize
BU of 4xxr by Molmil
Atomic Resolution X-Ray Crystal Structure of a Ruthenocene Conjugated Beta-Lactam Antibiotic in Complex with CTX-M-14 E166A Beta-Lactamase
分子名称: CTX-M-14 Class A Beta-Lactamase, POTASSIUM ION, [(1,2,3,4,5-eta)-1-(4-{[(4-carboxy-5,5-dimethyl-1,3-thiazolidin-2-yl)methyl]amino}-4-oxobutanoyl)cyclopentadienyl][(1,2,3,4,5-eta)-cyclopentadienyl]ruthenium, ...
著者Lewandowski, E.M, Chen, Y.
登録日2015-01-30
公開日2015-03-18
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.18 Å)
主引用文献Antibacterial properties and atomic resolution X-ray complex crystal structure of a ruthenocene conjugated beta-lactam antibiotic.
Chem.Commun.(Camb.), 51, 2015
4XUZ
DownloadVisualize
BU of 4xuz by Molmil
Structure of CTX-M-15 bound to RPX-7009 at 1.5 A
分子名称: 1,2-ETHANEDIOL, Beta-lactamase, CHLORIDE ION, ...
著者Clifton, M.C, Gardberg, A.
登録日2015-01-26
公開日2015-04-01
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Discovery of a Cyclic Boronic Acid beta-Lactamase Inhibitor (RPX7009) with Utility vs Class A Serine Carbapenemases.
J.Med.Chem., 58, 2015
4XUX
DownloadVisualize
BU of 4xux by Molmil
Structure of ampC bound to RPX-7009 at 1.75 A
分子名称: 1,2-ETHANEDIOL, 2-(2-METHOXYETHOXY)ETHANOL, Beta-lactamase, ...
著者Clifton, M.C, Abendroth, J.
登録日2015-01-26
公開日2015-04-01
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献Discovery of a Cyclic Boronic Acid beta-Lactamase Inhibitor (RPX7009) with Utility vs Class A Serine Carbapenemases.
J.Med.Chem., 58, 2015
4X6T
DownloadVisualize
BU of 4x6t by Molmil
M.tuberculosis betalactamase complexed with inhibitor EC19
分子名称: 3-[(2R)-2-(dihydroxyboranyl)-2-{[(2R)-2-{[(4-ethyl-2,3-dioxo-3,4-dihydropyrazin-1(2H)-yl)carbonyl]amino}-2-(4-hydroxyphenyl)acetyl]amino}ethyl]benzoic acid, Beta-lactamase, PHOSPHATE ION
著者Hazra, S.
登録日2014-12-09
公開日2015-12-23
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献Inhibiting the beta-Lactamase of Mycobacterium tuberculosis (Mtb) with Novel Boronic Acid Transition-State Inhibitors (BATSIs).
ACS Infect Dis, 1, 2015
4X69
DownloadVisualize
BU of 4x69 by Molmil
Crystal structure of OP0595 complexed with CTX-M-44
分子名称: (2S,5R)-N-(2-aminoethoxy)-1-formyl-5-[(sulfooxy)amino]piperidine-2-carboxamide, 1,2-ETHANEDIOL, Beta-lactamase Toho-1
著者Yamada, M, Watanabe, T.
登録日2014-12-07
公開日2015-07-01
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.42 Å)
主引用文献OP0595, a new diazabicyclooctane: mode of action as a serine beta-lactamase inhibitor, antibiotic and beta-lactam 'enhancer'
J.Antimicrob.Chemother., 70, 2015
4X68
DownloadVisualize
BU of 4x68 by Molmil
Crystal Structure of OP0595 complexed with AmpC
分子名称: (2S,5R)-N-(2-aminoethoxy)-1-formyl-5-[(sulfooxy)amino]piperidine-2-carboxamide, Beta-lactamase, NICKEL (II) ION
著者Yamada, M, Watanabe, T.
登録日2014-12-07
公開日2015-07-01
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.68 Å)
主引用文献OP0595, a new diazabicyclooctane: mode of action as a serine beta-lactamase inhibitor, antibiotic and beta-lactam 'enhancer'
J.Antimicrob.Chemother., 70, 2015
4WZ4
DownloadVisualize
BU of 4wz4 by Molmil
Crystal structure of P. aeruginosa AmpC
分子名称: Beta-lactamase, GLYCEROL, {(3R)-6-[(3-amino-1,2,4-thiadiazol-5-yl)oxy]-1-hydroxy-4,5-dimethyl-1,3-dihydro-2,1-benzoxaborol-3-yl}acetic acid
著者Ferguson, A.D.
登録日2014-11-18
公開日2015-08-05
最終更新日2018-04-25
実験手法X-RAY DIFFRACTION (1.05 Å)
主引用文献4,5-Disubstituted 6-Aryloxy-1,3-dihydrobenzo[c][1,2]oxaboroles Are Broad-Spectrum Serine beta-Lactamase Inhibitors.
ACS Infect Dis, 1, 2015

225946

件を2024-10-09に公開中

PDB statisticsPDBj update infoContact PDBjnumon