PDB: 82129 件ウェブページステータス検索Chemie searchBIRD

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8EK4	De novo designed ice-binding proteins from twist-constrained helices 分子名称: Ice-binding protein TIP-99a 著者 Bera, A.K, De Haas, R.J. 登録日 2022-09-19 公開日 2023-07-12 最終更新日 2024-04-03 実験手法 X-RAY DIFFRACTION (2.35 Å) 主引用文献 De novo designed ice-binding proteins from twist-constrained helices. Proc.Natl.Acad.Sci.USA, 120, 2023
8EK3	Human PU.1 ETS-Domain (165-270) Q226E Mutant Bound to d(AATAAGCGGAATGGGG) 分子名称: DNA (5'-D(*AP*AP*TP*AP*AP*GP*CP*GP*GP*AP*AP*TP*GP*GP*GP*G)-3'), DNA (5'-D(*TP*CP*CP*CP*CP*AP*TP*TP*CP*CP*GP*CP*TP*TP*AP*T)-3'), SODIUM ION, ... 著者 Terrell, J.R, Poon, G.M.K. 登録日 2022-09-19 公開日 2023-07-05 最終更新日 2023-10-25 実験手法 X-RAY DIFFRACTION (1.38 Å) 主引用文献 DNA selection by the master transcription factor PU.1. Cell Rep, 42, 2023
8EK1	Cryo-EM structure of a potent anti-malarial antibody L9 in complex with Plasmodium falciparum circumsporozoite protein (PfCSP)(dominant class) 分子名称: Circumsporozoite protein, L9 Fab heavy chain, L9 Fab light chain 著者 Tripathi, P, Kwong, P.D. 登録日 2022-09-19 公開日 2023-03-15 最終更新日 2023-09-27 実験手法 ELECTRON MICROSCOPY (3.6 Å) 主引用文献 Cryo-EM structures of anti-malarial antibody L9 with circumsporozoite protein reveal trimeric L9 association and complete 27-residue epitope. Structure, 31, 2023
8EJN	Structure of dehaloperoxidase A in complex with 2,4-dichlorophenol 分子名称: 2,4-dichlorophenol, DIMETHYL SULFOXIDE, Dehaloperoxidase A, ... 著者 Aktar, M.S, de Serrano, V.S, Franzen, S. 登録日 2022-09-17 公開日 2023-08-23 最終更新日 2023-08-30 実験手法 X-RAY DIFFRACTION (1.481 Å) 主引用文献 Comparative study of the binding and activation of 2,4-dichlorophenol by dehaloperoxidase A and B. J.Inorg.Biochem., 247, 2023
8EJM	Crystal structure of human DEAH-box helicase DHX15 in complex with SUGP1 G-patch 分子名称: ADENOSINE-5'-DIPHOSPHATE, ATP-dependent RNA helicase DHX15, CHLORIDE ION, ... 著者 Huang, J, Tong, L. 登録日 2022-09-17 公開日 2022-12-14 最終更新日 2023-10-25 実験手法 X-RAY DIFFRACTION (1.8 Å) 主引用文献 DHX15 is involved in SUGP1-mediated RNA missplicing by mutant SF3B1 in cancer. Proc.Natl.Acad.Sci.USA, 119, 2022
8EJJ	Lassa virus glycoprotein complex (Josiah) bound to S370.7 Fab 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, ... 著者 Perrett, H.R, Ward, A.B. 登録日 2022-09-16 公開日 2023-06-07 最終更新日 2024-05-01 実験手法 ELECTRON MICROSCOPY (3.22 Å) 主引用文献 Structural conservation of Lassa virus glycoproteins and recognition by neutralizing antibodies. Cell Rep, 42, 2023
8EJI	Lassa virus glycoprotein complex (Josiah) bound to 19.7E Fab 分子名称: 19.7E Fab heavy chain, 19.7E Fab light chain, 2-acetamido-2-deoxy-beta-D-glucopyranose, ... 著者 Perrett, H.R, Ward, A.B. 登録日 2022-09-16 公開日 2023-06-07 最終更新日 2024-05-01 実験手法 ELECTRON MICROSCOPY (3.81 Å) 主引用文献 Structural conservation of Lassa virus glycoproteins and recognition by neutralizing antibodies. Cell Rep, 42, 2023
8EJH	Lassa virus glycoprotein complex (Josiah) bound to 12.1F Fab 分子名称: 12.1F Fab heavy chain, 12.1F Fab light chain, 2-acetamido-2-deoxy-beta-D-glucopyranose, ... 著者 Perrett, H.R, Ward, A.B. 登録日 2022-09-16 公開日 2023-06-07 最終更新日 2024-05-01 実験手法 ELECTRON MICROSCOPY (3.71 Å) 主引用文献 Structural conservation of Lassa virus glycoproteins and recognition by neutralizing antibodies. Cell Rep, 42, 2023
8EJG	Structure of lineage VII Lassa virus glycoprotein complex (strain Togo/2016/7082) 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Glycoprotein GP1, ... 著者 Perrett, H.R, Ward, A.B. 登録日 2022-09-16 公開日 2023-06-07 最終更新日 2024-05-01 実験手法 ELECTRON MICROSCOPY (3.13 Å) 主引用文献 Structural conservation of Lassa virus glycoproteins and recognition by neutralizing antibodies. Cell Rep, 42, 2023
8EJF	Structure of lineage V Lassa virus glycoprotein complex (strain Soromba-R) 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, ... 著者 Perrett, H.R, Ward, A.B. 登録日 2022-09-16 公開日 2023-06-07 最終更新日 2024-05-01 実験手法 ELECTRON MICROSCOPY (3.72 Å) 主引用文献 Structural conservation of Lassa virus glycoproteins and recognition by neutralizing antibodies. Cell Rep, 42, 2023
8EJE	Structure of lineage II Lassa virus glycoprotein complex (strain NIG08-A41) 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Glycoprotein GP1, ... 著者 Perrett, H.R, Ward, A.B. 登録日 2022-09-16 公開日 2023-06-07 最終更新日 2024-05-01 実験手法 ELECTRON MICROSCOPY (3.69 Å) 主引用文献 Structural conservation of Lassa virus glycoproteins and recognition by neutralizing antibodies. Cell Rep, 42, 2023
8EJD	Structure of lineage IV Lassa virus glycoprotein complex (strain Josiah) 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, ... 著者 Perrett, H.R, Ward, A.B. 登録日 2022-09-16 公開日 2023-06-07 最終更新日 2024-05-01 実験手法 ELECTRON MICROSCOPY (3.8 Å) 主引用文献 Structural conservation of Lassa virus glycoproteins and recognition by neutralizing antibodies. Cell Rep, 42, 2023
8EJ8	Human PU.1 ETS-Domain (165-270) Q226E Mutant Bound to d(AATAAAAGGAAGTGGG) 分子名称: DNA (5'-D(*AP*AP*TP*AP*AP*AP*AP*GP*GP*AP*AP*GP*TP*GP*GP*G)-3'), DNA (5'-D(*TP*CP*CP*CP*AP*CP*TP*TP*CP*CP*TP*TP*TP*TP*AP*T)-3'), GLYCEROL, ... 著者 Terrell, J.R, Poon, G.M.K. 登録日 2022-09-16 公開日 2023-07-05 最終更新日 2023-10-25 実験手法 X-RAY DIFFRACTION (1.45 Å) 主引用文献 DNA selection by the master transcription factor PU.1. Cell Rep, 42, 2023
8EJ7	Polymorphism in SARS-CoV-2 Nsp5 main protease reveals differences in cleavage of viral and host substrates 分子名称: 3C-like proteinase nsp5 著者 Lu, J, Khan, M.B, Young, H.S, Lemieux, M.J. 登録日 2022-09-16 公開日 2023-05-03 最終更新日 2024-05-01 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 SARS-CoV-2 M pro Protease Variants of Concern Display Altered Viral Substrate and Cell Host Target Galectin-8 Processing but Retain Sensitivity toward Antivirals. Acs Cent.Sci., 9, 2023
8EJ6	Human PU.1 ETS-Domain (165-270) Bound to d(AATAAGAGGAATGGGG) 分子名称: DNA (5'-D(*AP*AP*TP*AP*AP*GP*AP*GP*GP*AP*AP*TP*GP*GP*GP*G)-3'), DNA (5'-D(*TP*CP*CP*CP*CP*AP*TP*TP*CP*CP*TP*CP*TP*TP*AP*T)-3'), Transcription factor PU.1 著者 Terrell, J.R, Poon, G.M.K. 登録日 2022-09-16 公開日 2023-07-05 最終更新日 2023-10-25 実験手法 X-RAY DIFFRACTION (1.39 Å) 主引用文献 DNA selection by the master transcription factor PU.1. Cell Rep, 42, 2023
8EJ4	Cryo-EM structure of the active NLRP3 inflammasome disk 分子名称: MAGNESIUM ION, NACHT, LRR and PYD domains-containing protein 3, ... 著者 Hao, W, Le, X. 登録日 2022-09-16 公開日 2022-12-14 最終更新日 2024-06-19 実験手法 ELECTRON MICROSCOPY (3.4 Å) 主引用文献 Cryo-EM structures of the active NLRP3 inflammasome disc. Nature, 613, 2023
8EJ0	Crystal structure of Fe-S cluster-dependent dehydratase from Paralcaligenes ureilyticus in complex with Mg 分子名称: BICARBONATE ION, CARBON DIOXIDE, Dihydroxyacid dehydratase, ... 著者 Bayaraa, T, Lonhienne, T, Guddat, L.W. 登録日 2022-09-16 公開日 2023-08-30 最終更新日 2023-11-15 実験手法 X-RAY DIFFRACTION (2.59 Å) 主引用文献 Crystal structure of Fe-S cluster-dependent dehydratase from Paralcaligenes ureilyticus in complex with Mg To Be Published
8EIZ	Cryo-EM structure of squid sensory receptor CRB1 分子名称: N-benzyl-2-(2,6-dimethylanilino)-N,N-diethyl-2-oxoethan-1-aminium, Squid sensory receptor CRB1, beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose 著者 Kang, G, Kim, J.J, Allard, C.A.H, Valencia-Montoya, W.A, van Giesen, L, Kilian, P.B, Bai, X, Bellono, N.W, Hibbs, R.E. 登録日 2022-09-15 公開日 2023-04-12 最終更新日 2023-04-26 実験手法 ELECTRON MICROSCOPY (3.13 Å) 主引用文献 Sensory specializations drive octopus and squid behaviour. Nature, 616, 2023
8EIS	Cryo-EM structure of octopus sensory receptor CRT1 分子名称: 2-[2-[(1~{S},2~{S},4~{S},5'~{R},6~{R},7~{S},8~{R},9~{S},12~{S},13~{R},16~{S})-5',7,9,13-tetramethylspiro[5-oxapentacyclo[10.8.0.0^{2,9}.0^{4,8}.0^{13,18}]icos-18-ene-6,2'-oxane]-16-yl]oxyethyl]propane-1,3-diol, 2-acetamido-2-deoxy-beta-D-glucopyranose, Octopus sensory receptor 著者 Kang, G, Kim, J.J, Allard, C.A.H, Valencia-Montoya, W.A, Bellono, N.W, Hibbs, R.E. 登録日 2022-09-15 公開日 2023-04-12 最終更新日 2023-04-26 実験手法 ELECTRON MICROSCOPY (2.62 Å) 主引用文献 Sensory specializations drive octopus and squid behaviour. Nature, 616, 2023
8EIP	Crystal structure of cyanophycin dipeptide hydrolase CphZ E251A from Acinetobacter baylyi DSM587 in complex with beta-Asp-Arg 分子名称: (2~{S})-4-[[(2~{S})-5-[[azanyl($l^{4}-azanylidene)methyl]amino]-1-$l^{1}-oxidanyl-1-oxidanylidene-pentan-2-yl]amino]-2-$l^{2}-azanyl-4-oxidanylidene-butanoic acid, MANGANESE (II) ION, Succinylglutamate desuccinylase, ... 著者 Sharon, I, Schmeing, T.M. 登録日 2022-09-15 公開日 2023-03-08 最終更新日 2024-05-22 実験手法 X-RAY DIFFRACTION (2.24 Å) 主引用文献 Discovery of cyanophycin dipeptide hydrolase enzymes suggests widespread utility of the natural biopolymer cyanophycin. Proc.Natl.Acad.Sci.USA, 120, 2023
8EIO	The complex of phosphorylated human delta F508 cystic fibrosis transmembrane conductance regulator (CFTR) with elexacaftor (VX-445), lumacaftor (VX-809) and ATP/Mg 分子名称: (6P)-N-(1,3-dimethyl-1H-pyrazole-4-sulfonyl)-6-[3-(3,3,3-trifluoro-2,2-dimethylpropoxy)-1H-pyrazol-1-yl]-2-[(4S)-2,2,4-trimethylpyrrolidin-1-yl]pyridine-3-carboxamide, ADENOSINE-5'-TRIPHOSPHATE, CHOLESTEROL, ... 著者 Fiedorczuk, K, Chen, J. 登録日 2022-09-15 公開日 2022-10-19 最終更新日 2024-06-19 実験手法 ELECTRON MICROSCOPY (2.8 Å) 主引用文献 Molecular structures reveal synergistic rescue of Delta 508 CFTR by Trikafta modulators. Science, 378, 2022
8EIN	Crystal structure of WT cyanophycin dipeptide hydrolase CphZ from Acinetobacter baylyi DSM587 分子名称: MANGANESE (II) ION, Succinylglutamate desuccinylase, ZINC ION 著者 Sharon, I, Schmeing, T.M. 登録日 2022-09-15 公開日 2023-03-08 最終更新日 2024-05-22 実験手法 X-RAY DIFFRACTION (2.7 Å) 主引用文献 Discovery of cyanophycin dipeptide hydrolase enzymes suggests widespread utility of the natural biopolymer cyanophycin. Proc.Natl.Acad.Sci.USA, 120, 2023
8EIM	Structure of ALAS with C-terminal truncation from S. cerevisiae 分子名称: 5-aminolevulinate synthase, mitochondrial, ACETATE ION, ... 著者 Tran, J.U, Brown, B.L. 登録日 2022-09-15 公開日 2023-03-15 最終更新日 2023-10-25 実験手法 X-RAY DIFFRACTION (2.1 Å) 主引用文献 The yeast ALA synthase C-terminus positively controls enzyme structure and function. Protein Sci., 32, 2023
8EIL	C-Terminal Domain of BrxL from Acinetobacter BREX type I phage restriction system 分子名称: MALONIC ACID, Protease Lon-related BREX system protein BrxL, SUCCINIC ACID 著者 Doyle, L.A, Stoddard, B.L, Kaiser, B. 登録日 2022-09-15 公開日 2023-02-22 最終更新日 2024-04-03 実験手法 X-RAY DIFFRACTION (2.25 Å) 主引用文献 Structure, substrate binding and activity of a unique AAA+ protein: the BrxL phage restriction factor. Nucleic Acids Res., 51, 2023
8EIF	Crystal structure of unmodified Pseudomonas aeruginosa protein PA0709 分子名称: Antibiotic biosynthesis monooxygenase, CACODYLIC ACID, GLYCEROL, ... 著者 Cuthbert, B.J, Goulding, C.W. 登録日 2022-09-14 公開日 2023-09-27 実験手法 X-RAY DIFFRACTION (2.1 Å) 主引用文献 Structural characterization of PA0709 To Be Published

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