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8IB8
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Human TRiC-PhLP2A-actin complex in the closed state
分子名称: ACTB protein (Fragment), Phosducin-like protein 3, T-complex protein 1 subunit alpha, ...
著者Roh, S.H, Park, J, Kim, H, Lim, S.
登録日2023-02-09
公開日2023-12-20
最終更新日2024-05-08
実験手法ELECTRON MICROSCOPY (4.42 Å)
主引用文献A structural vista of phosducin-like PhLP2A-chaperonin TRiC cooperation during the ATP-driven folding cycle.
Nat Commun, 15, 2024
5A0F
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BU of 5a0f by Molmil
Crystal structure of Yersinia Afp18-modified RhoA
分子名称: 2-acetamido-2-deoxy-alpha-D-glucopyranose, GUANOSINE-5'-DIPHOSPHATE, SULFATE ION, ...
著者Jank, T, Schimpl, M, van Aalten, D.M.
登録日2015-04-20
公開日2015-07-22
最終更新日2024-10-23
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Tyrosine glycosylation of Rho by Yersinia toxin impairs blastomere cell behaviour in zebrafish embryos.
Nat Commun, 6, 2015
5M70
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Crystal Structure of human RhoGAP mutated in its arginin finger (R85A) in complex with RhoA.GDP.AlF4- human
分子名称: GUANOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, Rho GTPase-activating protein 1, ...
著者Pellegrini, E, Bowler, M.W.
登録日2016-10-26
公開日2017-05-17
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Assessing the Influence of Mutation on GTPase Transition States by Using X-ray Crystallography, (19) F NMR, and DFT Approaches.
Angew. Chem. Int. Ed. Engl., 56, 2017
2D92
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BU of 2d92 by Molmil
Solution structure of the fifth PDZ domain of InaD-like protein
分子名称: InaD-like protein
著者Inoue, K, Hayashi, F, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2005-12-08
公開日2006-06-08
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献Solution structure of the fifth PDZ domain of InaD-like protein
to be published
5M6X
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BU of 5m6x by Molmil
Crystal Structure of human RhoGAP mutated in its arginine finger (R85A) in complex with RhoA.GDP.MgF3- human
分子名称: GUANOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, Rho GTPase-activating protein 1, ...
著者Pellegrini, E, Bowler, M.W.
登録日2016-10-26
公開日2017-05-17
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Assessing the Influence of Mutation on GTPase Transition States by Using X-ray Crystallography, (19) F NMR, and DFT Approaches.
Angew. Chem. Int. Ed. Engl., 56, 2017
2DAZ
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BU of 2daz by Molmil
Solution structure of the 7th PDZ domain of InaD-like protein
分子名称: InaD-like protein
著者Inoue, K, Nagashima, T, Izumi, K, Hayashi, F, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2005-12-14
公開日2006-06-14
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献Solution structure of the 7th PDZ domain of InaD-like protein
To be Published
2DB5
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BU of 2db5 by Molmil
Solution structure of the first PDZ domain of InaD-like protein
分子名称: InaD-like protein
著者Inoue, K, Kurosaki, C, Hayashi, F, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2005-12-15
公開日2006-06-15
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献Solution structure of the first PDZ domain of InaD-like protein
To be Published
2DLU
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BU of 2dlu by Molmil
Solution structure of the second PDZ domain of human InaD-like protein
分子名称: InaD-like protein
著者Inoue, K, Kurosaki, C, Izumi, K, Yoshida, M, Hayashi, F, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2006-04-20
公開日2006-10-20
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献Solution structure of the second PDZ domain of human InaD-like protein
to be published
3T06
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BU of 3t06 by Molmil
Crystal Structure of the DH/PH fragment of PDZRHOGEF with N-terminal regulatory elements in complex with Human RhoA
分子名称: Rho guanine nucleotide exchange factor 11, Transforming protein RhoA
著者Bielnicki, J.A, Derewenda, U, Derewenda, Z.S.
登録日2011-07-19
公開日2011-08-03
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2.84 Å)
主引用文献Insights into the Molecular Activation Mechanism of the RhoA-specific Guanine Nucleotide Exchange Factor, PDZRhoGEF.
J.Biol.Chem., 286, 2011
7SDP
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BU of 7sdp by Molmil
Replication Initiator Protein REPE54 and cognate DNA sequence with terminal three prime phosphates.
分子名称: DNA (5'-D(*CP*CP*TP*GP*TP*GP*AP*CP*AP*AP*AP*TP*TP*GP*CP*CP*CP*TP*CP*AP*GP*A)-3'), DNA (5'-D(*CP*TP*GP*AP*GP*GP*GP*CP*AP*AP*TP*TP*TP*GP*TP*CP*AP*CP*AP*GP*GP*A)-3'), MAGNESIUM ION, ...
著者Ward, A.R, Snow, C.D.
登録日2021-09-29
公開日2021-10-13
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (3.01 Å)
主引用文献Modular Protein-DNA Cocrystals as Precise, Programmable Assembly Scaffolds.
Acs Nano, 17, 2023
5HPY
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BU of 5hpy by Molmil
Crystal Structure of RhoA.GDP.MgF3-in complex with human Myosin 9b RhoGAP domain
分子名称: GUANOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, TRIFLUOROMAGNESATE, ...
著者Yi, F.S, Ren, J.Q, Feng, W.
登録日2016-01-21
公開日2016-07-13
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Noncanonical Myo9b-RhoGAP Accelerates RhoA GTP Hydrolysis by a Dual-Arginine-Finger Mechanism
J.Mol.Biol., 428, 2016
2DM8
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BU of 2dm8 by Molmil
Solution structure of the eighth PDZ domain of human InaD-like protein
分子名称: InaD-like protein
著者Inoue, K, Nagashima, T, Hayashi, F, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2006-04-20
公開日2006-10-20
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献Solution structure of the eighth PDZ domain of human InaD-like protein
To be published
2C32
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BU of 2c32 by Molmil
Co-axial association of recombinant eye lens aquaporin-0 observed in loosely packed 3D-crystals
分子名称: LENS FIBER MAJOR INTRINSIC PROTEIN
著者Palanivelu, D.V, Schirmer, T.
登録日2005-10-03
公開日2005-12-07
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (7.01 Å)
主引用文献Co-Axial Association of Recombinant Eye Lens Aquaporin-0 Observed in Loosely Packed 3D-Crystals
J.Mol.Biol., 355, 2006
2DMZ
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BU of 2dmz by Molmil
Solution structure of the third PDZ domain of human InaD-like protein
分子名称: InaD-like protein
著者Inoue, K, Nagashima, T, Hayashi, F, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2006-04-24
公開日2006-10-24
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献Solution structure of the third PDZ domain of human InaD-like protein
To be Published
7NXD
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BU of 7nxd by Molmil
Cryo-EM structure of human integrin alpha5beta1 in the half-bent conformation
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-6)-[alpha-D-mannopyranose-(1-3)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Schumacher, S, Dedden, D, Vazquez Nunez, R, Matoba, K, Takagi, J, Biertumpfel, C, Mizuno, N.
登録日2021-03-18
公開日2021-08-25
最終更新日2024-10-23
実験手法ELECTRON MICROSCOPY (4.6 Å)
主引用文献Structural insights into integrin alpha 5 beta 1 opening by fibronectin ligand.
Sci Adv, 7, 2021
5FR1
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Double acetylated RhoGDI-alpha in complex with RhoA-GDP
分子名称: GUANOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, RHO GDP-DISSOCIATION INHIBITOR 1, ...
著者Kuhlmann, N, Wroblowski, S, Lammers, M.
登録日2015-12-15
公開日2016-01-13
最終更新日2024-10-16
実験手法X-RAY DIFFRACTION (2.75 Å)
主引用文献Rhogdi Alpha Acetylation at K127 and K141 Affects Binding Towards Non-Prenylated Rhoa.
Biochemistry, 55, 2016
7SOZ
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BU of 7soz by Molmil
Replication Initiator Protein REPE54 and cognate DNA sequence with terminal three prime phosphates chemically crosslinked (5 mg/mL EDC, 12 hours).
分子名称: DNA (5'-D(*CP*CP*TP*GP*TP*GP*AP*CP*AP*AP*AP*TP*TP*GP*CP*CP*CP*TP*CP*AP*GP*A)-3'), DNA (5'-D(*CP*TP*GP*AP*GP*GP*GP*CP*AP*AP*TP*TP*TP*GP*TP*CP*AP*CP*AP*GP*GP*A)-3'), MAGNESIUM ION, ...
著者Ward, A.R, Snow, C.D.
登録日2021-11-01
公開日2021-11-10
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (3.14 Å)
主引用文献Modular Protein-DNA Cocrystals as Precise, Programmable Assembly Scaffolds.
Acs Nano, 17, 2023
7NWL
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BU of 7nwl by Molmil
Cryo-EM structure of human integrin alpha5beta1 (open form) in complex with fibronectin and TS2/16 Fv-clasp
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-6)-[alpha-D-mannopyranose-(1-3)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Integrin alpha-5, ...
著者Schumacher, S, Dedden, D, Vazquez Nunez, R, Matoba, K, Takagi, J, Biertumpfel, C, Mizuno, N.
登録日2021-03-17
公開日2021-06-02
実験手法ELECTRON MICROSCOPY (3.1 Å)
主引用文献Structural insights into integrin alpha 5 beta 1 opening by fibronectin ligand.
Sci Adv, 7, 2021
7NVM
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BU of 7nvm by Molmil
Human TRiC complex in closed state with nanobody Nb18, actin and PhLP2A bound
分子名称: ADENOSINE-5'-DIPHOSPHATE, ALUMINUM FLUORIDE, Actin, ...
著者Kelly, J.J, Chi, G, Bulawa, C, Paavilainen, V.O, Bountra, C, Huiskonen, J.T, Yue, W, Structural Genomics Consortium (SGC)
登録日2021-03-15
公開日2022-03-02
最終更新日2024-10-09
実験手法ELECTRON MICROSCOPY (3.1 Å)
主引用文献Snapshots of actin and tubulin folding inside the TRiC chaperonin.
Nat.Struct.Mol.Biol., 29, 2022
5FR2
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BU of 5fr2 by Molmil
Farnesylated RhoA-GDP in complex with RhoGDI-alpha, lysine acetylated at K178
分子名称: FARNESYL, GUANOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, ...
著者Kuhlmann, N, Wroblowski, S, Knyphausen, P, de Boor, S, Brenig, J, Zienert, A.Y, Meyer-Teschendorf, K, Praefcke, G.J.K, Nolte, H, Krueger, M, Schacherl, M, Baumann, U, James, L.C, Chin, J.W, Lammers, M.
登録日2015-12-15
公開日2016-01-13
最終更新日2024-10-23
実験手法X-RAY DIFFRACTION (3.35 Å)
主引用文献Structural and Mechanistic Insights Into the Regulation of the Fundamental Rho-Regulator Rhogdi Alpha by Lysine Acetylation.
J.Biol.Chem., 291, 2016
7U2P
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BU of 7u2p by Molmil
Structure of TcdA GTD in complex with RhoA
分子名称: GUANOSINE-5'-DIPHOSPHATE, Glucosyltransferase TcdA, MAGNESIUM ION, ...
著者Baohua, C, Zheng, L, Kay, P, Rongsheng, J.
登録日2022-02-24
公開日2022-05-04
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.596 Å)
主引用文献Structure of the glucosyltransferase domain of TcdA in complex with RhoA provides insights into substrate recognition.
Sci Rep, 12, 2022
2AP0
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BU of 2ap0 by Molmil
Solution Structure of the C27A ScYLV P1-P2 Frameshifting Pseudoknot, 20 Lowest Energy Structures
分子名称: C27A Sugarcane Yellow Leaf Virus RNA pseudoknot
著者Cornish, P.V, Giedroc, D.P.
登録日2005-08-15
公開日2006-09-05
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献The global structures of a wild-type and poorly functional plant luteoviral mRNA pseudoknot are essentially identical
Rna, 12, 2006
5IRC
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BU of 5irc by Molmil
p190A GAP domain complex with RhoA
分子名称: CHLORIDE ION, GUANOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, ...
著者Derewenda, U, Derewenda, Z.
登録日2016-03-12
公開日2016-08-17
最終更新日2019-12-25
実験手法X-RAY DIFFRACTION (1.72 Å)
主引用文献Deciphering the Molecular and Functional Basis of RHOGAP Family Proteins: A SYSTEMATIC APPROACH TOWARD SELECTIVE INACTIVATION OF RHO FAMILY PROTEINS.
J.Biol.Chem., 291, 2016
2AP5
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BU of 2ap5 by Molmil
Solution Structure of the C27A ScYLV P1-P2 Frameshifting Pseudoknot, Average Structure
分子名称: C27A Sugarcane Yellow Leaf Virus RNA pseudoknot
著者Cornish, P.V, Giedroc, D.P.
登録日2005-08-15
公開日2006-09-05
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献The global structures of a wild-type and poorly functional plant luteoviral mRNA pseudoknot are essentially identical
Rna, 12, 2006
2EHR
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BU of 2ehr by Molmil
Solution structure of the sixth PDZ domain of human InaD-like protein
分子名称: InaD-like protein
著者Inoue, K, Hayashi, F, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2007-03-07
公開日2007-09-11
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献Solution structure of the sixth PDZ domain of human InaD-like protein
to be published

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