Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

6IPZ
DownloadVisualize
BU of 6ipz by Molmil
Fyn SH3 domain R96W mutant, crystallized with 18-crown-6
分子名称: 1,4,7,10,13,16-HEXAOXACYCLOOCTADECANE, Tyrosine-protein kinase Fyn
著者Arold, S.T, Aljedani, S.S, Shahul Hameed, U.F.
登録日2018-11-05
公開日2018-11-28
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.576 Å)
主引用文献Synergy and allostery in ligand binding by HIV-1 Nef.
Biochem.J., 478, 2021
8F07
DownloadVisualize
BU of 8f07 by Molmil
Proteinase K Anomalous Dataset at 273 K and 12 keV
分子名称: CALCIUM ION, Proteinase K, SULFATE ION
著者Doukov, T, Yabukarski, F, Herschlag, D.
登録日2022-11-01
公開日2023-03-15
実験手法X-RAY DIFFRACTION (1.05 Å)
主引用文献Obtaining anomalous and ensemble information from protein crystals from 220 K up to physiological temperatures.
Acta Crystallogr D Struct Biol, 79, 2023
7KSK
DownloadVisualize
BU of 7ksk by Molmil
Thiophenyl-Pyrazolourea Derivatives as Potent, Brian Penetrant, Orally Bioavailable, and Isoform-Selective JNK3 Inhibitors
分子名称: 4-(4-{[(2-chlorophenyl)carbamoyl]amino}-1H-pyrazol-1-yl)-N-(oxetan-3-yl)thiophene-2-carboxamide, Mitogen-activated protein kinase 10
著者Park, H.
登録日2020-11-23
公開日2021-03-03
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.84 Å)
主引用文献Thiophene-Pyrazolourea Derivatives as Potent, Orally Bioavailable, and Isoform-Selective JNK3 Inhibitors.
Acs Med.Chem.Lett., 12, 2021
5UFE
DownloadVisualize
BU of 5ufe by Molmil
Wild-type K-Ras(GNP)/R11.1.6 complex
分子名称: CADMIUM ION, CALCIUM ION, CHLORIDE ION, ...
著者Parker, J.A, Mattos, C.
登録日2017-01-04
公開日2017-08-02
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.302 Å)
主引用文献An engineered protein antagonist of K-Ras/B-Raf interaction.
Sci Rep, 7, 2017
6I3R
DownloadVisualize
BU of 6i3r by Molmil
Structure, dynamics and roX2-lncRNA binding of tandem double-stranded RNA binding domains dsRBD1/2 of Drosophila helicase MLE
分子名称: Dosage compensation regulator
著者Jagtap, P.K.A, Buelow, S.v, Masiewicz, P, Simon, B, Hennig, J.
登録日2018-11-07
公開日2019-02-20
最終更新日2024-06-19
実験手法SOLUTION NMR
主引用文献Structure, dynamics and roX2-lncRNA binding of tandem double-stranded RNA binding domains dsRBD1,2 of Drosophila helicase Maleless.
Nucleic Acids Res., 47, 2019
6IS1
DownloadVisualize
BU of 6is1 by Molmil
Crystal Structure of Staphylococcus aureus response regulator ArlR receiver domain in complex with BeF3 and Mg
分子名称: BERYLLIUM TRIFLUORIDE ION, IMIDAZOLE, MAGNESIUM ION, ...
著者Wen, Y, Ouyang, Z.
登録日2018-11-15
公開日2019-10-30
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.59 Å)
主引用文献Deciphering the activation and recognition mechanisms of Staphylococcus aureus response regulator ArlR.
Nucleic Acids Res., 47, 2019
5TP0
DownloadVisualize
BU of 5tp0 by Molmil
Human mesotrypsin in complex with diminazene
分子名称: BERENIL, CALCIUM ION, SULFATE ION, ...
著者Kayode, O, Soares, A, Radisky, E.S.
登録日2016-10-19
公開日2017-05-17
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (1.25 Å)
主引用文献Small molecule inhibitors of mesotrypsin from a structure-based docking screen.
PLoS ONE, 12, 2017
7BR5
DownloadVisualize
BU of 7br5 by Molmil
Lysozyme-sugar complex in H2O
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CHLORIDE ION, Lysozyme C, ...
著者Tanaka, I, Chatake, T.
登録日2020-03-26
公開日2021-03-10
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1 Å)
主引用文献Recent structural insights into the mechanism of lysozyme hydrolysis.
Acta Crystallogr D Struct Biol, 77, 2021
8F00
DownloadVisualize
BU of 8f00 by Molmil
Lysozyme Anomalous Dataset at 293 K and 12 keV
分子名称: 1,2-ETHANEDIOL, CHLORIDE ION, Lysozyme C, ...
著者Doukov, T, Yabukarski, F, Herschlag, D.
登録日2022-11-01
公開日2023-03-15
最終更新日2024-05-01
実験手法X-RAY DIFFRACTION (1.2 Å)
主引用文献Obtaining anomalous and ensemble information from protein crystals from 220 K up to physiological temperatures.
Acta Crystallogr D Struct Biol, 79, 2023
6CTH
DownloadVisualize
BU of 6cth by Molmil
Crystal Structure of Pathogenesis-related Protein 1G (PR-1G) Kinase Domain from Cacao
分子名称: ACETATE ION, Concanavalin A-like lectin protein kinase family protein, MAGNESIUM ION, ...
著者Tosarini, T.R, Profeta, G.S, dos Reis, C.V, Counago, R.M, Massirer, K.B, Edwards, A.M, Elkins, J.M, Structural Genomics Consortium (SGC)
登録日2018-03-23
公開日2018-04-11
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Crystal Structure of Pathogenesis-related Protein 1G (PR-1G) Kinase Domain from Cacao
To Be Published
4NPT
DownloadVisualize
BU of 4npt by Molmil
Crystal Structure of HIV-1 Protease Multiple Mutant P51 Complexed with Darunavir
分子名称: (3R,3AS,6AR)-HEXAHYDROFURO[2,3-B]FURAN-3-YL(1S,2R)-3-[[(4-AMINOPHENYL)SULFONYL](ISOBUTYL)AMINO]-1-BENZYL-2-HYDROXYPROPYLCARBAMATE, GLYCEROL, Protease
著者Zhang, Y, Weber, I.T.
登録日2013-11-22
公開日2014-10-08
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.66 Å)
主引用文献Structures of darunavir-resistant HIV-1 protease mutant reveal atypical binding of darunavir to wide open flaps.
Acs Chem.Biol., 9, 2014
8EKA
DownloadVisualize
BU of 8eka by Molmil
Cryo-EM structure of a potent anti-malarial antibody L9 in complex with Plasmodium falciparum circumsporozoite protein (PfCSP)(class 2)
分子名称: Circumsporozoite protein, L9 Fab heavy chain, L9 Fab light chain
著者Tripathi, P, Kwong, P.D.
登録日2022-09-20
公開日2023-03-15
最終更新日2023-09-27
実験手法ELECTRON MICROSCOPY (3.7 Å)
主引用文献Cryo-EM structures of anti-malarial antibody L9 with circumsporozoite protein reveal trimeric L9 association and complete 27-residue epitope.
Structure, 31, 2023
7KSI
DownloadVisualize
BU of 7ksi by Molmil
Thiophenyl-Pyrazolourea Derivatives as Potent, Brian Penetrant, Orally Bioavailable, and Isoform-Selective JNK3 Inhibitors
分子名称: 4-(4-{[(2-chloro-6-fluorophenyl)carbamoyl]amino}-1H-pyrazol-1-yl)-5-methyl-N-(oxetan-3-yl)thiophene-2-carboxamide, Mitogen-activated protein kinase 10
著者Park, H.
登録日2020-11-23
公開日2021-03-03
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.726 Å)
主引用文献Thiophene-Pyrazolourea Derivatives as Potent, Orally Bioavailable, and Isoform-Selective JNK3 Inhibitors.
Acs Med.Chem.Lett., 12, 2021
7KSJ
DownloadVisualize
BU of 7ksj by Molmil
Thiophenyl-Pyrazolourea Derivatives as Potent, Brian Penetrant, Orally Bioavailable, and Isoform-Selective JNK3 Inhibitors
分子名称: 4-(4-{[(2-chloro-6-fluorophenyl)carbamoyl]amino}-1H-pyrazol-1-yl)-N-(oxetan-3-yl)thiophene-2-carboxamide, Mitogen-activated protein kinase 10
著者Park, H.
登録日2020-11-23
公開日2021-03-03
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.06 Å)
主引用文献Thiophene-Pyrazolourea Derivatives as Potent, Orally Bioavailable, and Isoform-Selective JNK3 Inhibitors.
Acs Med.Chem.Lett., 12, 2021
5Y5C
DownloadVisualize
BU of 5y5c by Molmil
Crystal structure of dha bind to bovine beta-lactoglobulin
分子名称: Beta-lactoglobulin, DOCOSA-4,7,10,13,16,19-HEXAENOIC ACID
著者Jiang, L, Liu, J.
登録日2017-08-08
公開日2018-08-08
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.61 Å)
主引用文献Crystal structure of dha bind to bovine beta-lactoglobulin
To Be Published
8EZU
DownloadVisualize
BU of 8ezu by Molmil
Lysozyme Anomalous Dataset at 273 K and 7.1 keV
分子名称: 1,2-ETHANEDIOL, CHLORIDE ION, Lysozyme C, ...
著者Doukov, T, Yabukarski, F, Herschlag, D.
登録日2022-11-01
公開日2023-03-15
最終更新日2024-05-01
実験手法X-RAY DIFFRACTION (1.901 Å)
主引用文献Obtaining anomalous and ensemble information from protein crystals from 220 K up to physiological temperatures.
Acta Crystallogr D Struct Biol, 79, 2023
7KU0
DownloadVisualize
BU of 7ku0 by Molmil
Data clustering and dynamics of chymotrypsinogen cluster 138 (yellow) structure
分子名称: Chymotrypsinogen A, SULFATE ION
著者Nguyen, T, Phan, K.L, Kreitler, D.F, Andrews, L.C, Gabelli, S.B, Kozakov, D, Jakoncic, J, Sweet, R.M, Soares, A.S, Bernstein, H.J.
登録日2020-11-24
公開日2021-03-10
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.02 Å)
主引用文献A simple technique to classify diffraction data from dynamic proteins according to individual polymorphs.
Acta Crystallogr D Struct Biol, 78, 2022
4NQQ
DownloadVisualize
BU of 4nqq by Molmil
Crystal structure of mouse P-cadherin extracellular domains EC1-EC2
分子名称: CALCIUM ION, COPPER (II) ION, Cadherin-3
著者Brasch, J, Shapiro, L.
登録日2013-11-25
公開日2014-09-24
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (3.2 Å)
主引用文献Structural and energetic determinants of adhesive binding specificity in type I cadherins.
Proc.Natl.Acad.Sci.USA, 111, 2014
5Y5I
DownloadVisualize
BU of 5y5i by Molmil
Time-resolved SFX structure of cytochrome P450nor: 20 ms after photo-irradiation of caged NO in the presence of NADH (NO-bound state), light data
分子名称: GLYCEROL, NADP nitrous oxide-forming nitric oxide reductase, NITRIC OXIDE, ...
著者Tosha, T, Nomura, T, Nishida, T, Saeki, N, Okubayashi, K, Yamagiwa, R, Sugahara, M, Nakane, T, Yamashita, K, Hirata, K, Ueno, G, Kimura, T, Hisano, T, Muramoto, K, Sawai, H, Takeda, H, Mizohata, E, Yamashita, A, Kanematsu, Y, Takano, Y, Nango, E, Tanaka, R, Nureki, O, Ikemoto, Y, Murakami, H, Owada, S, Tono, K, Yabashi, M, Yamamoto, M, Ago, H, Iwata, S, Sugimoto, H, Shiro, Y, Kubo, M.
登録日2017-08-09
公開日2017-12-06
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Capturing an initial intermediate during the P450nor enzymatic reaction using time-resolved XFEL crystallography and caged-substrate.
Nat Commun, 8, 2017
8EZP
DownloadVisualize
BU of 8ezp by Molmil
Lysozyme Anomalous Dataset at 260 K and 7.1 keV
分子名称: 1,2-ETHANEDIOL, CHLORIDE ION, Lysozyme C, ...
著者Doukov, T, Yabukarski, F, Herschlag, D.
登録日2022-11-01
公開日2023-03-15
最終更新日2024-05-01
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Obtaining anomalous and ensemble information from protein crystals from 220 K up to physiological temperatures.
Acta Crystallogr D Struct Biol, 79, 2023
7KU2
DownloadVisualize
BU of 7ku2 by Molmil
Data clustering and dynamics of chymotrypsinogen clulster 140 (structure)
分子名称: Chymotrypsinogen A, SULFATE ION
著者Nguyen, T, Phan, K.L, Kreitler, D.F, Andrews, L.C, Gabelli, S.B, Kozakov, D, Jakoncic, J, Sweet, R.M, Soares, A.S, Bernstein, H.J.
登録日2020-11-24
公開日2021-03-10
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.185 Å)
主引用文献A simple technique to classify diffraction data from dynamic proteins according to individual polymorphs.
Acta Crystallogr D Struct Biol, 78, 2022
4NHQ
DownloadVisualize
BU of 4nhq by Molmil
X-ray structure of the complex between hen egg white lysozyme and pentachlorocarbonyliridate(III) (5 days)
分子名称: CHLORIDE ION, Lysozyme C, SODIUM ION, ...
著者Petruk, A.A, Bikiel, D.E, Vergara, A, Merlino, A.
登録日2013-11-05
公開日2014-09-17
最終更新日2015-06-24
実験手法X-RAY DIFFRACTION (1.92 Å)
主引用文献Interaction between proteins and Ir based CO releasing molecules: mechanism of adduct formation and CO release.
Inorg.Chem., 53, 2014
8F06
DownloadVisualize
BU of 8f06 by Molmil
Proteinase K Anomalous Dataset at 310 K and 7.1 keV
分子名称: CALCIUM ION, Proteinase K, SULFATE ION
著者Doukov, T, Yabukarski, F, Herschlag, D.
登録日2022-11-01
公開日2023-03-15
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Obtaining anomalous and ensemble information from protein crystals from 220 K up to physiological temperatures.
Acta Crystallogr D Struct Biol, 79, 2023
8EPU
DownloadVisualize
BU of 8epu by Molmil
1.6 A crystal structure of the lipocalin dog allergen Can f 1 with the C118S mutation
分子名称: Major allergen Can f 1
著者Min, J, Pedersen, L.C, Geoffrey, M.A.
登録日2022-10-06
公開日2023-04-05
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Structural and ligand binding analysis of the pet allergens Can f 1 and Fel d 7.
Front Allergy, 4, 2023
5TSL
DownloadVisualize
BU of 5tsl by Molmil
Molecular Dynamics Flexible Fitting Model of Coxsackievirus A16 empty Procapsid VP3 Subunit
分子名称: coxsackievirus A16
著者Fan, C, Cong, Y, Ye, X, Huang, Z.
登録日2016-10-29
公開日2017-02-01
最終更新日2024-03-20
実験手法ELECTRON MICROSCOPY (6.5 Å)
主引用文献Structural alteration and surface modifi cation of coxsackievirus A16 capsids by beta-propiolactone treatment
J.VIROL., 2017

223532

件を2024-08-07に公開中

PDB statisticsPDBj update infoContact PDBjnumon