Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

6FL8
DownloadVisualize
BU of 6fl8 by Molmil
Inositol 1,3,4,5,6-pentakisphosphate 2-kinase from A. thaliana in complex with purpurogallin and ADP
分子名称: 1,2-ETHANEDIOL, 2,3,4,6-tetrahydroxy-5H-benzo[7]annulen-5-one, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, ...
著者Whitfield, H.L, Brearley, C.A, Hemmings, A.M.
登録日2018-01-25
公開日2018-09-12
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献A Fluorescent Probe Identifies Active Site Ligands of Inositol Pentakisphosphate 2-Kinase.
J. Med. Chem., 61, 2018
6F86
DownloadVisualize
BU of 6f86 by Molmil
Crystal Structure of E. coli GyraseB 24kDa in complex with 4-(4-bromo-1H-pyrazol-1-yl)-6-[(ethylcarbamoyl)amino]-N-(pyridin-3-yl)pyridine-3-carboxamide
分子名称: 4-(4-bromanylpyrazol-1-yl)-6-(ethylcarbamoylamino)-~{N}-pyridin-3-yl-pyridine-3-carboxamide, DNA gyrase subunit B
著者Narramore, S.K, Stevenson, C.E.M, Lawson, D.M, Maxwell, A, Fishwick, C.W.G.
登録日2017-12-12
公開日2019-06-26
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献New insights into the binding mode of pyridine-3-carboxamide inhibitors of E. coli DNA gyrase.
Bioorg.Med.Chem., 27, 2019
6CSU
DownloadVisualize
BU of 6csu by Molmil
The structure of the Cep63-Cep152 heterotetrameric complex
分子名称: Centrosomal protein of 152 kDa, Centrosomal protein of 63 kDa
著者Lee, E, Chen, Y, Zhang, L, Kim, T.S, Ahn, J.I, Park, J.E, Lee, K.S.
登録日2018-03-21
公開日2019-03-27
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Molecular architecture of a cylindrical self-assembly at human centrosomes.
Nat Commun, 10, 2019
6F94
DownloadVisualize
BU of 6f94 by Molmil
Crystal Structure of E. coli GyraseB 24kDa in complex with 6-[(ethylcarbamoyl)amino]-4-[(3-methyphenyl)amino]-N-(3-methyphenyl)pyridine-3-carboxamide
分子名称: 6-(ethylcarbamoylamino)-~{N}-(3-methylphenyl)-4-[(3-methylphenyl)amino]pyridine-3-carboxamide, DNA gyrase subunit B
著者Narramore, S.K, Stevenson, C.E.M, Lawson, D.M, Maxwell, A, Fishwick, C.W.G.
登録日2017-12-14
公開日2019-06-26
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.35 Å)
主引用文献New insights into the binding mode of pyridine-3-carboxamide inhibitors of E. coli DNA gyrase.
Bioorg.Med.Chem., 27, 2019
6FIS
DownloadVisualize
BU of 6fis by Molmil
Human cytosolic 5'-nucleotidase II soaked with 10mM 7-Benzyloxymethyl-7H-adenine
分子名称: Cytosolic purine 5'-nucleotidase, GLYCEROL, MAGNESIUM ION, ...
著者Aghajari, N, Preeti, P.
登録日2018-01-19
公開日2019-01-30
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Lead optimization and biological evaluation of fragment-based cN-II inhibitors.
Eur J Med Chem, 168, 2019
7MZW
DownloadVisualize
BU of 7mzw by Molmil
Anaplastic lymphoma kinase (ALK) extracellular ligand binding region 673-1025
分子名称: ALK tyrosine kinase receptor
著者Rossi, P, Sowaileh, M, Reshetnyak, A.V, Kalodimos, C.G.
登録日2021-05-24
公開日2021-12-08
最終更新日2021-12-15
実験手法SOLUTION NMR
主引用文献Mechanism for the activation of the anaplastic lymphoma kinase receptor.
Nature, 600, 2021
6FIW
DownloadVisualize
BU of 6fiw by Molmil
Human cytosolic 5'-nucleotidase II co-crystallized with 10mM Sodium ((4-(3'-((7H-purin-6-yl)carbamoyl)-[1,1'-biphenyl]-3-yl)-1H-imidazol-1-yl) methyl) phosphonate
分子名称: Cytosolic purine 5'-nucleotidase, GLYCEROL, MAGNESIUM ION, ...
著者Aghajari, N, Preeti, P.
登録日2018-01-19
公開日2019-01-30
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Lead optimization and biological evaluation of fragment-based cN-II inhibitors.
Eur J Med Chem, 168, 2019
7ND2
DownloadVisualize
BU of 7nd2 by Molmil
Cryo-EM structure of the human FERRY complex
分子名称: Glutamine amidotransferase-like class 1 domain-containing protein 1, Protein phosphatase 1 regulatory subunit 21, Quinone oxidoreductase-like protein 1
著者Quentin, D, Klink, B.U, Raunser, S.
登録日2021-01-29
公開日2022-03-02
最終更新日2024-07-10
実験手法ELECTRON MICROSCOPY (4 Å)
主引用文献Structural basis of mRNA binding by the human FERRY Rab5 effector complex.
Mol.Cell, 83, 2023
6E4T
DownloadVisualize
BU of 6e4t by Molmil
Structure of AMPK bound to activator
分子名称: 1-O-{6-chloro-5-[4-(1-hydroxycyclobutyl)phenyl]-1H-indole-3-carbonyl}-beta-D-glucopyranuronic acid, 5'-AMP-activated protein kinase catalytic subunit alpha-1, 5'-AMP-activated protein kinase subunit beta-1, ...
著者Calabrese, M.F, Kurumbail, R.G.
登録日2018-07-18
公開日2018-08-08
最終更新日2018-09-05
実験手法X-RAY DIFFRACTION (3.4 Å)
主引用文献Acyl Glucuronide Metabolites of 6-Chloro-5-[4-(1-hydroxycyclobutyl)phenyl]-1 H-indole-3-carboxylic Acid (PF-06409577) and Related Indole-3-carboxylic Acid Derivatives are Direct Activators of Adenosine Monophosphate-Activated Protein Kinase (AMPK).
J. Med. Chem., 61, 2018
6E4U
DownloadVisualize
BU of 6e4u by Molmil
Structure of AMPK bound to activator
分子名称: 1-O-{6-chloro-5-[6-(dimethylamino)-2-methoxypyridin-3-yl]-1H-indole-3-carbonyl}-beta-D-glucopyranuronic acid, 5'-AMP-activated protein kinase catalytic subunit alpha-1, 5'-AMP-activated protein kinase subunit beta-1, ...
著者Calabrese, M.F, Kurumbail, R.G.
登録日2018-07-18
公開日2018-08-08
最終更新日2018-09-05
実験手法X-RAY DIFFRACTION (3.27 Å)
主引用文献Acyl Glucuronide Metabolites of 6-Chloro-5-[4-(1-hydroxycyclobutyl)phenyl]-1 H-indole-3-carboxylic Acid (PF-06409577) and Related Indole-3-carboxylic Acid Derivatives are Direct Activators of Adenosine Monophosphate-Activated Protein Kinase (AMPK).
J. Med. Chem., 61, 2018
6E4W
DownloadVisualize
BU of 6e4w by Molmil
Structure of AMPK bound to activator
分子名称: 1-O-(4,6-difluoro-5-{4-[(2S)-oxan-2-yl]phenyl}-1H-indole-3-carbonyl)-beta-D-glucopyranuronic acid, 5'-AMP-activated protein kinase catalytic subunit alpha-1, 5'-AMP-activated protein kinase subunit beta-1, ...
著者Calabrese, M.F, Kurumbail, R.G.
登録日2018-07-18
公開日2018-08-08
最終更新日2018-09-05
実験手法X-RAY DIFFRACTION (3.35 Å)
主引用文献Acyl Glucuronide Metabolites of 6-Chloro-5-[4-(1-hydroxycyclobutyl)phenyl]-1 H-indole-3-carboxylic Acid (PF-06409577) and Related Indole-3-carboxylic Acid Derivatives are Direct Activators of Adenosine Monophosphate-Activated Protein Kinase (AMPK).
J. Med. Chem., 61, 2018
7NQD
DownloadVisualize
BU of 7nqd by Molmil
Prim-Pol Domain of CRISPR-associated Prim-Pol (CAPP) from Marinitoga sp. 1137
分子名称: TPR_REGION domain-containing protein
著者Li, A.W.H, Doherty, A.J.
登録日2021-03-01
公開日2022-05-04
最終更新日2024-06-19
実験手法X-RAY DIFFRACTION (2.97 Å)
主引用文献Molecular basis for the initiation of DNA primer synthesis.
Nature, 605, 2022
7NQF
DownloadVisualize
BU of 7nqf by Molmil
Prim-Pol Domain of CRISPR-associated Prim-Pol (CAPP) from Marinitoga sp. 1137 with dsDNA
分子名称: COBALT (II) ION, DNA(CGTGDG), TPR_REGION domain-containing protein
著者Li, A.W.H, Doherty, A.J.
登録日2021-03-01
公開日2022-05-04
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2.02 Å)
主引用文献Molecular basis for the initiation of DNA primer synthesis.
Nature, 605, 2022
7NQE
DownloadVisualize
BU of 7nqe by Molmil
Prim-Pol Domain of CRISPR-associated Prim-Pol (CAPP) from Marinitoga sp. 1137 with dGTP
分子名称: 1,2-ETHANEDIOL, 2'-DEOXYGUANOSINE-5'-TRIPHOSPHATE, MANGANESE (II) ION, ...
著者Li, A.W.H, Doherty, A.J.
登録日2021-03-01
公開日2022-05-04
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.28 Å)
主引用文献Molecular basis for the initiation of DNA primer synthesis.
Nature, 605, 2022
6FFC
DownloadVisualize
BU of 6ffc by Molmil
Structure of an inhibitor-bound ABC transporter
分子名称: ATP-binding cassette sub-family G member 2, ~{tert}-butyl 3-[(2~{S},5~{S},8~{S})-14-cyclopentyloxy-2-(2-methylpropyl)-4,7-bis(oxidanylidene)-3,6,17-triazatetracyclo[8.7.0.0^{3,8}.0^{11,16}]heptadeca-1(10),11,13,15-tetraen-5-yl]propanoate
著者Jackson, S.M, Manolaridis, I, Kowal, J, Zechner, M, Taylor, N.M.I, Bause, M, Bauer, S, Bartholomaeus, R, Stahlberg, H, Bernhardt, G, Koenig, B, Buschauer, A, Altmann, K.H, Locher, K.P.
登録日2018-01-06
公開日2018-04-11
最終更新日2019-12-11
実験手法ELECTRON MICROSCOPY (3.56 Å)
主引用文献Structural basis of small-molecule inhibition of human multidrug transporter ABCG2.
Nat. Struct. Mol. Biol., 25, 2018
6FEQ
DownloadVisualize
BU of 6feq by Molmil
Structure of inhibitor-bound ABCG2
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 5D3(Fab) heavy chain variable domain, 5D3(Fab) light chain variable domain, ...
著者Jackson, S.M, Manolaridis, I, Kowal, J, Zechner, M, Altmann, K.H, Locher, K.P.
登録日2018-01-03
公開日2018-04-11
最終更新日2020-07-29
実験手法ELECTRON MICROSCOPY (3.6 Å)
主引用文献Structural basis of small-molecule inhibition of human multidrug transporter ABCG2.
Nat. Struct. Mol. Biol., 25, 2018
6FIR
DownloadVisualize
BU of 6fir by Molmil
Human cytosolic 5'-nucleotidase II soaked with 5mM3-Phenyl-N-(9H-purin-6-yl)benzamide
分子名称: Cytosolic purine 5'-nucleotidase, GLYCEROL, MAGNESIUM ION, ...
著者Aghajari, N, Preeti, P.
登録日2018-01-19
公開日2019-01-30
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Lead optimization and biological evaluation of fragment-based cN-II inhibitors.
Eur J Med Chem, 168, 2019
6FIU
DownloadVisualize
BU of 6fiu by Molmil
Human cytosolic 5'-nucleotidase II soaked with 10mM 2-(6-([1,1'-Biphenyl]-3-carboxamido)-9H-purin-9-yl)acetic acid
分子名称: Cytosolic purine 5'-nucleotidase, GLYCEROL, MAGNESIUM ION, ...
著者Aghajari, N, Preeti, P.
登録日2018-01-19
公開日2019-01-30
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Lead optimization and biological evaluation of fragment-based cN-II inhibitors.
Eur J Med Chem, 168, 2019
6FL3
DownloadVisualize
BU of 6fl3 by Molmil
Inositol 1,3,4,5,6-pentakisphosphate 2-kinase from A. thaliana in complex with myo-IP5 and ADP
分子名称: 2-[3-(2-HYDROXY-1,1-DIHYDROXYMETHYL-ETHYLAMINO)-PROPYLAMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, ADENOSINE-5'-DIPHOSPHATE, Inositol-pentakisphosphate 2-kinase, ...
著者Whitfield, H.L, Brearley, C.A, Hemmings, A.M.
登録日2018-01-25
公開日2018-09-12
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.36 Å)
主引用文献A Fluorescent Probe Identifies Active Site Ligands of Inositol Pentakisphosphate 2-Kinase.
J. Med. Chem., 61, 2018
6FJK
DownloadVisualize
BU of 6fjk by Molmil
Inositol 1,3,4,5,6-pentakisphosphate 2-kinase from A. thaliana in complex with myo-IP6 and ADP
分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, ADENOSINE-5'-DIPHOSPHATE, INOSITOL HEXAKISPHOSPHATE, ...
著者Whitfield, H.L, Brearley, C.A, Hemmings, A.M.
登録日2018-01-22
公開日2018-09-12
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.025 Å)
主引用文献A Fluorescent Probe Identifies Active Site Ligands of Inositol Pentakisphosphate 2-Kinase.
J. Med. Chem., 61, 2018
7SP4
DownloadVisualize
BU of 7sp4 by Molmil
In situ cryo-EM structure of bacteriophage Sf6 gp3:gp7:gp5 complex in conformation 2 at 3.71A resolution
分子名称: Gene 3 protein, Gene 5 protein, Gene 7 protein
著者Li, F, Cingolani, G, Hou, C, Yang, R.
登録日2021-11-02
公開日2022-11-09
最終更新日2024-06-05
実験手法ELECTRON MICROSCOPY (3.71 Å)
主引用文献High-resolution cryo-EM structure of the Shigella virus Sf6 genome delivery tail machine.
Sci Adv, 8, 2022
7SPU
DownloadVisualize
BU of 7spu by Molmil
In situ cryo-EM structure of bacteriophage Sf6 gp3:gp7:gp5 complex in conformation 1 at 3.73A resolution
分子名称: Gene 3 protein, Gene 5 protein, Gene 7 protein
著者Li, F, Cingolani, G, Hou, C, Yang, R.
登録日2021-11-03
公開日2022-11-23
最終更新日2024-06-05
実験手法ELECTRON MICROSCOPY (3.73 Å)
主引用文献High-resolution cryo-EM structure of the Shigella virus Sf6 genome delivery tail machine.
Sci Adv, 8, 2022
7TB9
DownloadVisualize
BU of 7tb9 by Molmil
Structural characterization of the biological synthetic peptide pCEMP1
分子名称: CEMP1-p1
著者Lopez Giraldo, A, del Rio Portilla, F, Nidome Campos, M, Romo Arevalo, E, Arzate, H.
登録日2021-12-21
公開日2023-01-18
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Solution NMR structure of cementum protein 1 derived peptide (CEMP1-p1) and its role in the mineralization process.
J.Pept.Sci., 29, 2023
8D0K
DownloadVisualize
BU of 8d0k by Molmil
Human CST-DNA polymerase alpha/primase preinitiation complex bound to 4xTEL-foldback template - PRIM2C advanced PIC
分子名称: CST complex subunit CTC1, CST complex subunit STN1, CST complex subunit TEN1, ...
著者He, Q, Lin, X, Chavez, B.L, Agrawal, S, Lusk, B.L, Lim, C.
登録日2022-05-26
公開日2022-06-22
最終更新日2024-02-14
実験手法ELECTRON MICROSCOPY (4.27 Å)
主引用文献Structures of the human CST-Pol alpha-primase complex bound to telomere templates.
Nature, 608, 2022
8D0B
DownloadVisualize
BU of 8d0b by Molmil
Human CST-DNA polymerase alpha/primase preinitiation complex bound to 4xTEL-foldback template
分子名称: CST complex subunit CTC1, CST complex subunit STN1, CST complex subunit TEN1, ...
著者He, Q, Lin, X, Chavez, B.L, Agrawal, S, Lusk, B.L, Lim, C.
登録日2022-05-26
公開日2022-06-22
最終更新日2024-02-14
実験手法ELECTRON MICROSCOPY (3.43 Å)
主引用文献Structures of the human CST-Pol alpha-primase complex bound to telomere templates.
Nature, 608, 2022

222926

件を2024-07-24に公開中

PDB statisticsPDBj update infoContact PDBjnumon