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3S17
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BU of 3s17 by Molmil
RNA Polymerase II Initiation Complex with a 9-nt RNA
分子名称: DNA (5'-D(*CP*TP*AP*CP*CP*GP*AP*TP*AP*AP*GP*CP*AP*GP*AP*CP*GP*AP*TP*CP*CP*TP*CP*TP*CP*GP*AP*TP*G)-3'), DNA-directed RNA polymerase II subunit RPB1, DNA-directed RNA polymerase II subunit RPB11, ...
著者Liu, X, Bushnell, D.A, Silva, D.A, Huang, X, Kornberg, R.D.
登録日2011-05-14
公開日2011-08-10
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (3.2 Å)
主引用文献Initiation complex structure and promoter proofreading.
Science, 333, 2011
3RZD
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BU of 3rzd by Molmil
RNA Polymerase II Initiation Complex with a 5-nt RNA
分子名称: DNA (5'-D(*CP*TP*AP*CP*CP*GP*AP*TP*AP*AP*GP*CP*AP*GP*AP*CP*GP*AP*TP*CP*CP*TP*CP*TP*CP*GP*AP*TP*G)-3'), DNA-directed RNA polymerase II subunit RPB1, DNA-directed RNA polymerase II subunit RPB11, ...
著者Liu, X, Bushnell, D.A, Silva, D.A, Huang, X, Kornberg, R.D.
登録日2011-05-11
公開日2011-08-10
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (3.3 Å)
主引用文献Initiation complex structure and promoter proofreading.
Science, 333, 2011
3RZO
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BU of 3rzo by Molmil
RNA Polymerase II Initiation Complex with a 4-nt RNA
分子名称: DNA (5'-D(*CP*TP*AP*CP*CP*GP*AP*TP*AP*AP*GP*CP*AP*GP*AP*CP*GP*AP*TP*CP*CP*TP*CP*TP*CP*GP*AP*TP*G)-3'), DNA-directed RNA polymerase II subunit RPB1, DNA-directed RNA polymerase II subunit RPB11, ...
著者Liu, X, Bushnell, D.A, Silva, D.A, Huang, X, Kornberg, R.D.
登録日2011-05-12
公開日2011-08-10
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Initiation complex structure and promoter proofreading.
Science, 333, 2011
3S1R
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BU of 3s1r by Molmil
RNA Polymerase II Initiation Complex with a 5-nt 3'-deoxy RNA soaked with GTP
分子名称: DNA (5'-D(*CP*TP*AP*CP*CP*GP*AP*TP*AP*AP*GP*CP*AP*GP*AP*CP*GP*AP*TP*CP*CP*TP*CP*TP*CP*GP*AP*TP*G)-3'), DNA-directed RNA polymerase II subunit RPB1, DNA-directed RNA polymerase II subunit RPB11, ...
著者Liu, X, Bushnell, D.A, Silva, D.A, Huang, X, Kornberg, R.D.
登録日2011-05-16
公開日2011-08-10
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (3.2 Å)
主引用文献Initiation complex structure and promoter proofreading.
Science, 333, 2011
3S16
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BU of 3s16 by Molmil
RNA Polymerase II Initiation Complex with an 8-nt RNA
分子名称: DNA (5'-D(*CP*TP*AP*CP*CP*GP*AP*TP*AP*AP*GP*CP*AP*GP*AP*CP*GP*AP*TP*CP*CP*TP*CP*TP*CP*GP*AP*TP*G)-3'), DNA-directed RNA polymerase II subunit RPB1, DNA-directed RNA polymerase II subunit RPB11, ...
著者Liu, X, Bushnell, D.A, Silva, D.A, Huang, X, Kornberg, R.D.
登録日2011-05-14
公開日2011-08-10
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (3.241 Å)
主引用文献Initiation complex structure and promoter proofreading.
Science, 333, 2011
3S14
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BU of 3s14 by Molmil
RNA Polymerase II Initiation Complex with a 6-nt RNA
分子名称: DNA (5'-D(*CP*TP*AP*CP*CP*GP*AP*TP*AP*AP*GP*CP*AP*GP*AP*CP*GP*AP*TP*CP*CP*TP*CP*TP*CP*GP*AP*TP*G)-3'), DNA-directed RNA polymerase II subunit RPB1, DNA-directed RNA polymerase II subunit RPB11, ...
著者Liu, X, Bushnell, D.A, Silva, D.A, Huang, X, Kornberg, R.D.
登録日2011-05-14
公開日2011-08-10
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2.85 Å)
主引用文献Initiation complex structure and promoter proofreading.
Science, 333, 2011
3S1N
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BU of 3s1n by Molmil
RNA Polymerase II Initiation Complex with a 5-nt RNA (variant 2)
分子名称: DNA (5'-D(*CP*TP*AP*CP*CP*GP*AP*TP*AP*AP*GP*CP*AP*GP*AP*CP*GP*AP*TP*GP*CP*TP*CP*TP*CP*GP*AP*TP*G)-3'), DNA-directed RNA polymerase II subunit RPB1, DNA-directed RNA polymerase II subunit RPB11, ...
著者Liu, X, Bushnell, D.A, Silva, D.A, Huang, X, Kornberg, R.D.
登録日2011-05-15
公開日2011-08-10
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (3.1 Å)
主引用文献Initiation complex structure and promoter proofreading.
Science, 333, 2011
3S2D
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BU of 3s2d by Molmil
RNA Polymerase II Initiation Complex with a 5-nt RNA containing a 5Br-U
分子名称: DNA (5'-D(*CP*TP*AP*CP*CP*GP*AP*TP*AP*AP*GP*CP*AP*GP*AP*CP*GP*AP*TP*CP*AP*CP*CP*TP*CP*GP*AP*TP*G)-3'), DNA-directed RNA polymerase II subunit RPB1, DNA-directed RNA polymerase II subunit RPB11, ...
著者Liu, X, Bushnell, D.A, Silva, D.A, Huang, X, Kornberg, R.D.
登録日2011-05-16
公開日2011-08-10
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (3.2 Å)
主引用文献Initiation complex structure and promoter proofreading.
Science, 333, 2011
3S1Q
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BU of 3s1q by Molmil
RNA Polymerase II Initiation Complex with a 5-nt 3'-deoxy RNA soaked with ATP
分子名称: ADENOSINE-5'-TRIPHOSPHATE, DNA (5'-D(*CP*TP*AP*CP*CP*GP*AP*TP*AP*AP*GP*CP*AP*GP*AP*CP*GP*AP*TP*CP*CP*TP*CP*TP*CP*GP*AP*TP*G)-3'), DNA-directed RNA polymerase II subunit RPB1, ...
著者Liu, X, Bushnell, D.A, Silva, D.A, Huang, X, Kornberg, R.D.
登録日2011-05-16
公開日2011-08-10
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (3.3 Å)
主引用文献Initiation complex structure and promoter proofreading.
Science, 333, 2011
3S15
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BU of 3s15 by Molmil
RNA Polymerase II Initiation Complex with a 7-nt RNA
分子名称: DNA (5'-D(*CP*TP*AP*CP*CP*GP*AP*TP*AP*AP*GP*CP*AP*GP*AP*CP*GP*AP*TP*CP*CP*TP*CP*TP*CP*GP*AP*TP*G)-3'), DNA-directed RNA polymerase II subunit RPB1, DNA-directed RNA polymerase II subunit RPB11, ...
著者Liu, X, Bushnell, D.A, Silva, D.A, Huang, X, Kornberg, R.D.
登録日2011-05-14
公開日2011-08-10
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (3.3 Å)
主引用文献Initiation complex structure and promoter proofreading.
Science, 333, 2011
3S2H
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BU of 3s2h by Molmil
RNA Polymerase II Initiation Complex with a 6-nt RNA containing a 2[prime]-iodo ATP
分子名称: DNA (5'-D(*CP*TP*AP*CP*CP*GP*AP*TP*AP*AP*GP*CP*AP*GP*AP*CP*GP*AP*TP*CP*CP*TP*CP*TP*CP*GP*AP*TP*G)-3'), DNA-directed RNA polymerase II subunit RPB1, DNA-directed RNA polymerase II subunit RPB11, ...
著者Liu, X, Bushnell, D.A, Silva, D.A, Huang, X, Kornberg, R.D.
登録日2011-05-16
公開日2011-08-17
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (3.3 Å)
主引用文献Initiation complex structure and promoter proofreading.
Science, 333, 2011
3S1M
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BU of 3s1m by Molmil
RNA Polymerase II Initiation Complex with a 5-nt RNA (variant 1)
分子名称: DNA (5'-D(*CP*TP*AP*CP*CP*GP*AP*TP*AP*AP*GP*CP*AP*GP*AP*CP*GP*AP*TP*CP*GP*TP*CP*TP*CP*GP*AP*TP*G)-3'), DNA-directed RNA polymerase II subunit RPB1, DNA-directed RNA polymerase II subunit RPB11, ...
著者Liu, X, Bushnell, D.A, Silva, D.A, Huang, X, Kornberg, R.D.
登録日2011-05-15
公開日2011-08-10
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (3.13 Å)
主引用文献Initiation complex structure and promoter proofreading.
Science, 333, 2011
6WOX
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BU of 6wox by Molmil
Thermus thermophilus RNA polymerase initially transcribing complex with 2'dCTP
分子名称: 2'-DEOXYCYTIDINE-5'-TRIPHOSPHATE, DNA (25-MER), DNA (5'-D(P*TP*GP*CP*AP*TP*CP*CP*GP*TP*GP*AP*GP*TP*GP*CP*AP*G)-3'), ...
著者Shin, Y, Murakami, K.S.
登録日2020-04-26
公開日2020-06-10
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (3.14 Å)
主引用文献The mechanism of the nucleo-sugar selection by multi-subunit RNA polymerases.
Nat Commun, 12, 2021
6WOY
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BU of 6woy by Molmil
Thermus thermophilus RNA polymerase initially transcribing complex with 3'dCTP
分子名称: 3'-DEOXY-CYTIDINE-5'-TRIPHOSPHATE, DNA (25-MER), DNA (5'-D(P*TP*GP*CP*AP*TP*CP*CP*GP*TP*GP*AP*GP*TP*GP*CP*AP*G)-3'), ...
著者Shin, Y, Murakami, K.S.
登録日2020-04-26
公開日2020-06-10
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献The mechanism of the nucleo-sugar selection by multi-subunit RNA polymerases.
Nat Commun, 12, 2021
2R7Z
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BU of 2r7z by Molmil
Cisplatin lesion containing RNA polymerase II elongation complex
分子名称: 5'-D(*CP*AP*AP*GP*TP*AP*G)-3', 5'-D(*TP*AP*CP*TP*TP*GUP*CP*CP*CP*TP*CP*CP*TP*CP*AP*T)-3', 5'-R(*UP*UP*UP*GP*AP*GP*GP*AP*GP*G)-3', ...
著者Damsma, G.E, Alt, A, Brueckner, F, Carell, T, Cramer, P.
登録日2007-09-10
公開日2007-11-20
最終更新日2017-10-25
実験手法X-RAY DIFFRACTION (3.8 Å)
主引用文献Mechanism of transcriptional stalling at cisplatin-damaged DNA.
Nat.Struct.Mol.Biol., 14, 2007
2NVX
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BU of 2nvx by Molmil
RNA polymerase II elongation complex in 5 mM Mg+2 with 2'-dUTP
分子名称: 28-MER DNA template strand, 5'-D(*CP*TP*GP*CP*TP*TP*AP*TP*CP*GP*GP*TP*AP*G)-3', 5'-R(*AP*UP*CP*GP*AP*GP*AP*GP*GP*A)-3', ...
著者Wang, D, Bushnell, D.A, Westover, K.D, Kaplan, C.D, Kornberg, R.D.
登録日2006-11-13
公開日2006-12-19
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (3.6 Å)
主引用文献Structural basis of transcription: role of the trigger loop in substrate specificity and catalysis
Cell(Cambridge,Mass.), 127, 2006
2NVT
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BU of 2nvt by Molmil
RNA Polymerase II Elongation Complex in 150 mM Mg+2 with GMPCPP
分子名称: 5'-D(*GP*TP*AP*CP*TP*TP*G)-3', 5'-D(P*CP*AP*AP*GP*TP*AP*CP*TP*TP*AP*CP*GP*CP*CP*TP*GP*GP*TP*CP*TP*T)-3', 5'-R(*AP*AP*GP*AP*CP*CP*AP*GP*GP*C)-3', ...
著者Wang, D, Bushnell, D.A, Westover, K.D, Kaplan, C.D, Kornberg, R.D.
登録日2006-11-13
公開日2006-12-12
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (3.36 Å)
主引用文献Structural basis of transcription: role of the trigger loop in substrate specificity and catalysis
Cell(Cambridge,Mass.), 127, 2006
2NVZ
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BU of 2nvz by Molmil
RNA Polymerase II elongation complex with UTP, updated 11/2006
分子名称: 28-MER DNA template strand, 5'-D(*CP*TP*GP*CP*TP*TP*AP*TP*CP*GP*GP*TP*AP*G)-3', 5'-R(*AP*UP*CP*GP*AP*GP*AP*GP*GP*A)-3', ...
著者Wang, D, Bushnell, D.A, Westover, K.D, Kaplan, C.D, Kornberg, R.D.
登録日2006-11-14
公開日2006-12-19
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (4.3 Å)
主引用文献Structural basis of transcription: role of the trigger loop in substrate specificity and catalysis
Cell(Cambridge,Mass.), 127, 2006
2NVQ
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BU of 2nvq by Molmil
RNA Polymerase II Elongation Complex in 150 mM Mg+2 with 2'dUTP
分子名称: 28-MER DNA template strand, 5'-D(*CP*TP*GP*CP*TP*TP*AP*TP*CP*GP*GP*TP*AP*G)-3', 5'-R(*AP*UP*CP*GP*AP*GP*AP*GP*GP*A)-3', ...
著者Wang, D, Bushnell, D.A, Westover, K.D, Kaplan, C.D, Kornberg, R.D.
登録日2006-11-13
公開日2006-12-12
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Structural basis of transcription: role of the trigger loop in substrate specificity and catalysis
Cell(Cambridge,Mass.), 127, 2006
2F8E
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BU of 2f8e by Molmil
Foot and Mouth Disease Virus RNA-dependent RNA polymerase in complex with uridylylated VPg protein
分子名称: MAGNESIUM ION, MANGANESE (II) ION, RNA-dependent RNA polymerase, ...
著者Ferrer-Orta, C, Arias, A, Perez-Luque, R, Escarmis, C, Domingo, E, Verdaguer, N.
登録日2005-12-02
公開日2006-03-28
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献The structure of a protein primer-polymerase complex in the initiation of genome replication
Embo J., 25, 2006
6YYS
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BU of 6yys by Molmil
Structure of Mycobacterium smegmatis HelD protein in complex with RNA polymerase core - State II, primary channel engaged and active site interfering
分子名称: DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, DNA-directed RNA polymerase subunit beta', ...
著者Kouba, T, Koval, T, Krasny, L, Dohnalek, J.
登録日2020-05-05
公開日2020-11-04
最終更新日2021-09-29
実験手法ELECTRON MICROSCOPY (3.08 Å)
主引用文献Mycobacterial HelD is a nucleic acids-clearing factor for RNA polymerase.
Nat Commun, 11, 2020
6F5P
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BU of 6f5p by Molmil
A mechanism for the activation of the influenza virus transcriptase
分子名称: ALA-ALA-ALA-ALA-ALA-ALA-ALA-ALA-ALA-ALA, DNA-directed RNA polymerase subunit, MAGNESIUM ION, ...
著者Serna Martin, I, Grimes, J.M.
登録日2017-12-02
公開日2018-09-19
実験手法X-RAY DIFFRACTION (4.14 Å)
主引用文献A Mechanism for the Activation of the Influenza Virus Transcriptase.
Mol. Cell, 70, 2018
6F5O
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BU of 6f5o by Molmil
A mechanism for the activation of the influenza virus transcriptase
分子名称: 3' promoter vRNA, 5' promoter vRNA, Polymerase acidic protein, ...
著者Serna Martin, I, Grimes, J.M.
登録日2017-12-02
公開日2018-06-27
最終更新日2024-05-15
実験手法ELECTRON MICROSCOPY (9.8 Å)
主引用文献A Mechanism for the Activation of the Influenza Virus Transcriptase.
Mol. Cell, 70, 2018
1HHS
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BU of 1hhs by Molmil
RNA dependent RNA polymerase from dsRNA bacteriophage phi6
分子名称: MANGANESE (II) ION, RNA-DIRECTED RNA POLYMERASE
著者Grimes, J.M, Butcher, S.J, Makeyev, E.V, Bamford, D.H, Stuart, D.I.
登録日2000-12-28
公開日2001-03-27
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献A Mechanism for Initiating RNA-Dependent RNA Polymerization
Nature, 410, 2001
7F0S
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BU of 7f0s by Molmil
A crystal structure of alphavirus nonstructural protein 4 (nsP4) reveals an intrinsically 1dynamic RNA-dependent RNA polymerase
分子名称: RNA-directed RNA polymerase nsP4
著者Tan, Y.B, Luo, D.
登録日2021-06-06
公開日2022-02-16
最終更新日2024-05-29
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Crystal structures of alphavirus nonstructural protein 4 (nsP4) reveal an intrinsically dynamic RNA-dependent RNA polymerase fold.
Nucleic Acids Res., 50, 2022

221716

件を2024-06-26に公開中

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