PDB: 338 件ウェブページステータス検索Chemie searchBIRD

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7DVV	Heme sensor protein PefR from Streptococcus agalactiae bound to operator DNA (28-mer) 分子名称: DNA (28-MER), HTH marR-type domain-containing protein 著者 Nishinaga, M, Nagai, S, Nishitani, Y, Sugimoto, H, Shiro, Y, Sawai, H. 登録日 2021-01-15 公開日 2021-09-29 最終更新日 2023-11-29 実験手法 X-RAY DIFFRACTION (2.49 Å) 主引用文献 Heme controls the structural rearrangement of its sensor protein mediating the hemolytic bacterial survival. Commun Biol, 4, 2021
7KEN	Protein Tyrosine Phosphatase 1B, D289A mutant, apo state 分子名称: Tyrosine-protein phosphatase non-receptor type 1 著者 Fox, J.M, Hongdusit, A. 登録日 2020-10-11 公開日 2021-03-10 最終更新日 2023-10-18 実験手法 X-RAY DIFFRACTION (1.8 Å) 主引用文献 Optogenetic Analysis of Allosteric Control in Protein Tyrosine Phosphatases. Biochemistry, 60, 2021
6RMQ	Crystal structure of a selenomethionine-substituted A70M I84M mutant of the essential repressor DdrO from radiation resistant-Deinococcus bacteria (Deinococcus deserti) 分子名称: HTH-type transcriptional regulator DdrOC 著者 Arnoux, P, Siponen, M.I, Pignol, D, De Groot, A, Blanchard, L. 登録日 2019-05-07 公開日 2019-10-09 最終更新日 2024-10-23 実験手法 X-RAY DIFFRACTION (3 Å) 主引用文献 Crystal structure of the transcriptional repressor DdrO: insight into the metalloprotease/repressor-controlled radiation response in Deinococcus. Nucleic Acids Res., 47, 2019
3W8Z	The complex structure of EncM with hydroxytetraketide 分子名称: (7S)-7-hydroxy-1-phenyloctane-1,3,5-trione, FLAVIN-ADENINE DINUCLEOTIDE, Putative FAD-dependent oxygenase EncM 著者 Teufel, R, Miyanaga, A, Stull, F, Michaudel, Q, Louie, G, Noel, J.P, Baran, P.S, Palfey, B, Moore, B.S. 登録日 2013-03-22 公開日 2013-10-30 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (1.8 Å) 主引用文献 Flavin-mediated dual oxidation controls an enzymatic Favorskii-type rearrangement. Nature, 503, 2013
3W8W	The crystal structure of EncM 分子名称: FLAVIN-ADENINE DINUCLEOTIDE, Putative FAD-dependent oxygenase EncM 著者 Teufel, R, Miyanaga, A, Stull, F, Michaudel, Q, Louie, G, Noel, J.P, Baran, P.S, Palfey, B, Moore, B.S. 登録日 2013-03-22 公開日 2013-10-30 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (1.95 Å) 主引用文献 Flavin-mediated dual oxidation controls an enzymatic Favorskii-type rearrangement. Nature, 503, 2013
4F2H	Structure of the minimal Ste5 VWA domain subject to autoinhibition by the Ste5 PH domain 分子名称: Protein STE5 著者 Coyle, S.M, Zalatan, J.G, Lim, W.A. 登録日 2012-05-07 公開日 2012-08-22 最終更新日 2023-09-13 実験手法 X-RAY DIFFRACTION (3.192 Å) 主引用文献 Conformational control of the Ste5 scaffold protein insulates against MAP kinase misactivation. Science, 337, 2012
4IVZ	A Y37F mutant of C.Esp1396I bound to its highest affinity operator site OM 分子名称: DNA (5'-D(*AP*TP*GP*TP*AP*GP*AP*CP*TP*AP*TP*AP*GP*TP*CP*GP*AP*CP*A)-3'), DNA (5'-D(*TP*TP*GP*TP*CP*GP*AP*CP*TP*AP*TP*AP*GP*TP*CP*TP*AP*CP*A)-3'), Regulatory protein 著者 Martin, R.N.A, McGeehan, J.E, Kneale, G.G. 登録日 2013-01-23 公開日 2014-01-29 最終更新日 2023-09-20 実験手法 X-RAY DIFFRACTION (3.1 Å) 主引用文献 Structural and Mutagenic Analysis of the RM Controller Protein C.Esp1396I. Plos One, 9, 2014
5X5D	Human thymidylate synthase bound with dUMP 分子名称: 2'-DEOXYURIDINE 5'-MONOPHOSPHATE, Thymidylate synthase 著者 Chen, D, Jansson, A, Larsson, A, Nordlund, P. 登録日 2017-02-15 公開日 2017-06-28 最終更新日 2023-11-22 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Structural analyses of human thymidylate synthase reveal a site that may control conformational switching between active and inactive states J. Biol. Chem., 292, 2017
1TKQ	SOLUTION STRUCTURE OF A LINKED UNSYMMETRIC GRAMICIDIN IN A MEMBRANE-ISOELECTRICAL SOLVENTS MIXTURE IN THE PRESENCE OF CsCl 分子名称: GRAMICIDIN A, MINI-GRAMICIDIN A, SUCCINIC ACID 著者 Xie, X, Al-Momani, L, Bockelmann, D, Griesinger, C, Koert, U. 登録日 2004-06-09 公開日 2004-07-13 最終更新日 2025-03-26 実験手法 SOLUTION NMR 主引用文献 An Asymmetric Ion Channel Derived from Gramicidin A. Synthesis, Function and NMR Structure. FEBS J., 272, 2005
8RQ5	Cryo-EM structure of the light-driven sodium-pumping rhodopsin KR2 分子名称: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, EICOSANE, OLEIC ACID, ... 著者 Kovalev, K, Linares, R. 登録日 2024-01-17 公開日 2025-01-29 実験手法 ELECTRON MICROSCOPY (2.32 Å) 主引用文献 EasyGrid: A versatile platform for automated cryo-EM sample preparation and quality control To Be Published
5X5A	Human thymidylate synthase bound with phosphate ion 分子名称: PHOSPHATE ION, Thymidylate synthase 著者 Chen, D, Jansson, A, Larsson, A, Nordlund, P. 登録日 2017-02-15 公開日 2017-06-28 最終更新日 2023-11-22 実験手法 X-RAY DIFFRACTION (2.39 Å) 主引用文献 Structural analyses of human thymidylate synthase reveal a site that may control conformational switching between active and inactive states J. Biol. Chem., 292, 2017
4I5L	Structural mechanism of trimeric PP2A holoenzyme involving PR70: insight for Cdc6 dephosphorylation 分子名称: CALCIUM ION, DI(HYDROXYETHYL)ETHER, MALONATE ION, ... 著者 Wlodarchak, N, Satyshur, K.A, Guo, F, Xing, Y. 登録日 2012-11-28 公開日 2013-05-08 最終更新日 2024-11-20 実験手法 X-RAY DIFFRACTION (2.43 Å) 主引用文献 Structure of the Ca(2+)-dependent PP2A heterotrimer and insights into Cdc6 dephosphorylation. Cell Res., 23, 2013
8STN	Crystal structure of KRAS-G12D/G75A mutant, GDP-bound 分子名称: CHLORIDE ION, GTPase KRas, GUANOSINE-5'-DIPHOSPHATE, ... 著者 Tran, T.H, Dharmaiah, S, Simanshu, D.K. 登録日 2023-05-10 公開日 2023-08-23 最終更新日 2023-10-11 実験手法 X-RAY DIFFRACTION (2.03 Å) 主引用文献 Allosteric Regulation of Switch-II Domain Controls KRAS Oncogenicity. Cancer Res., 83, 2023
8STM	Crystal structure of KRAS-G75A mutant, GDP-bound 分子名称: GTPase KRas, GUANOSINE-5'-DIPHOSPHATE, MAGNESIUM ION 著者 Tran, T.H, Dharmaiah, S, Simanshu, D.K. 登録日 2023-05-10 公開日 2023-08-23 最終更新日 2023-10-11 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Allosteric Regulation of Switch-II Domain Controls KRAS Oncogenicity. Cancer Res., 83, 2023
4NV5	C50A mutant of Synechococcus VKOR, C2 crystal form (dehydrated) 分子名称: UBIQUINONE-10, VKORC1/thioredoxin domain protein 著者 Liu, S, Cheng, W, Fowle Grider, R, Shen, G, Li, W. 登録日 2013-12-04 公開日 2014-02-12 最終更新日 2024-10-09 実験手法 X-RAY DIFFRACTION (2.79 Å) 主引用文献 Structures of an intramembrane vitamin K epoxide reductase homolog reveal control mechanisms for electron transfer. Nat Commun, 5, 2014
4NV2	C50A mutant of Synechococcus VKOR, C2221 crystal form 分子名称: UBIQUINONE-10, VKORC1/thioredoxin domain protein 著者 Liu, S, Cheng, W, Fowle Grider, R, Shen, G, Li, W. 登録日 2013-12-04 公開日 2014-02-12 最終更新日 2024-10-30 実験手法 X-RAY DIFFRACTION (3.61 Å) 主引用文献 Structures of an intramembrane vitamin K epoxide reductase homolog reveal control mechanisms for electron transfer. Nat Commun, 5, 2014
4Q6N	Structural analysis of the tripeptide-bound form of Helicobacter pylori Csd4, a D,L-carboxypeptidase 分子名称: CALCIUM ION, Conserved hypothetical secreted protein, GLYCEROL, ... 著者 Kim, H.S, Kim, J, Im, H.N, An, D.R, Lee, M, Hesek, D, Mobashery, S, Kim, J.Y, Cho, K, Yoon, H.J, Han, B.W, Lee, B.I, Suh, S.W. 登録日 2014-04-23 公開日 2014-11-05 最終更新日 2024-03-20 実験手法 X-RAY DIFFRACTION (1.55 Å) 主引用文献 Structural basis for the recognition of muramyltripeptide by Helicobacter pylori Csd4, a D,L-carboxypeptidase controlling the helical cell shape Acta Crystallogr.,Sect.D, 70, 2014
4Q6M	Structural analysis of the apo-form of Helicobacter pylori Csd4, a D,L-carboxypeptidase 分子名称: CALCIUM ION, Conserved hypothetical secreted protein, GLYCEROL 著者 Kim, H.S, Kim, J, Im, H.N, An, D.R, Lee, M, Hesek, D, Mobashery, S, Kim, J.Y, Cho, K, Yoon, H.J, Han, B.W, Lee, B.I, Suh, S.W. 登録日 2014-04-23 公開日 2014-11-05 最終更新日 2024-03-20 実験手法 X-RAY DIFFRACTION (1.6 Å) 主引用文献 Structural basis for the recognition of muramyltripeptide by Helicobacter pylori Csd4, a D,L-carboxypeptidase controlling the helical cell shape Acta Crystallogr.,Sect.D, 70, 2014
4G2K	Crystal structure of the Marburg Virus GP2 ectodomain in its post-fusion conformation 分子名称: CHLORIDE ION, GLYCEROL, General control protein GCN4, ... 著者 Malashkevich, V.N, Koellhoffer, J.F, Harrison, J.S, Toro, R, Bhosle, R.C, Chandran, K, Lai, J.R, Almo, S.C. 登録日 2012-07-12 公開日 2012-09-12 最終更新日 2024-11-27 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 Crystal Structure of the Marburg Virus GP2 Core Domain in Its Postfusion Conformation. Biochemistry, 51, 2012
4HSX	Structure of the L100F mutant of dehaloperoxidase-hemoglobin A from Amphitrite ornata with 4-bromophenol 分子名称: 4-BROMOPHENOL, Dehaloperoxidase A, GLYCEROL, ... 著者 Thompson, M.K, Plummer, A, Franzen, S. 登録日 2012-10-31 公開日 2013-05-01 最終更新日 2024-02-28 実験手法 X-RAY DIFFRACTION (1.12 Å) 主引用文献 Role of polarity of the distal pocket in the control of inhibitor binding in dehaloperoxidase-hemoglobin. Biochemistry, 52, 2013
4HU5	Oxime side-chain cross-links in the GCN4-p1 dimeric coiled coil: Linear precursor 分子名称: ACETATE ION, GLYCEROL, General control protein GCN4 著者 Haney, C.M, Horne, W.S. 登録日 2012-11-02 公開日 2013-08-21 最終更新日 2024-10-09 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 Oxime Side-Chain Cross-Links in an alpha-Helical Coiled-Coil Protein: Structure, Thermodynamics, and Folding-Templated Synthesis of Bicyclic Species. Chemistry, 19, 2013
4HSW	Structure of the L100F mutant of dehaloperoxidase-hemoglobin A from Amphitrite ornata 分子名称: Dehaloperoxidase A, GLYCEROL, PROTOPORPHYRIN IX CONTAINING FE, ... 著者 Thompson, M.K, Plummer, A, Franzen, S. 登録日 2012-10-31 公開日 2013-05-01 最終更新日 2024-02-28 実験手法 X-RAY DIFFRACTION (1.22 Å) 主引用文献 Role of polarity of the distal pocket in the control of inhibitor binding in dehaloperoxidase-hemoglobin. Biochemistry, 52, 2013
4HTM	Mechanism of CREB Recognition and Coactivation by the CREB Regulated Transcriptional Coactivator CRTC2 分子名称: CREB-regulated transcription coactivator 2, ZINC ION 著者 Luo, Q, Viste, K, Urday-Zaa, J.C, Kumar, G.S, Tsai, W.-W, Talai, A, Mayo, K, Montminy, M, Radhakrishnan, I. 登録日 2012-11-01 公開日 2012-12-05 最終更新日 2024-02-28 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Protein kinase N1, a cell inhibitor of Akt kinase, has a central role in quality control of germinal center formation Proc.Natl.Acad.Sci.USA, 2012
3WJE	Crystal structure of mutant nitrobindin M75W/H76L/Q96C/M148L/H158L (NB6) from Arabidopsis thaliana 分子名称: UPF0678 fatty acid-binding protein-like protein At1g79260 著者 Mizohata, E, Fukumoto, K, Onoda, A, Bocola, M, Arlt, M, Inoue, T, Schwaneberg, U, Hayashi, T. 登録日 2013-10-08 公開日 2014-04-02 最終更新日 2024-03-20 実験手法 X-RAY DIFFRACTION (1.7 Å) 主引用文献 A Rhodium Complex-linked Hybrid Biocatalyst: Stereo-controlled Phenylacetylene Polymerization within an Engineered Protein Cavity CHEMCATCHEM, 2014
3WJD	Crystal structure of mutant nitrobindin F44W/M75L/H76L/Q96C/M148L/H158L (NB5) from Arabidopsis thaliana 分子名称: GLYCEROL, UPF0678 fatty acid-binding protein-like protein At1g79260 著者 Mizohata, E, Fukumoto, K, Onoda, A, Bocola, M, Arlt, M, Inoue, T, Schwaneberg, U, Hayashi, T. 登録日 2013-10-08 公開日 2014-04-02 最終更新日 2024-03-20 実験手法 X-RAY DIFFRACTION (1.1 Å) 主引用文献 A Rhodium Complex-linked Hybrid Biocatalyst: Stereo-controlled Phenylacetylene Polymerization within an Engineered Protein Cavity CHEMCATCHEM, 2014

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