Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

4UTA
DownloadVisualize
BU of 4uta by Molmil
Crystal structure of dengue 2 virus envelope glycoprotein in complex with the Fab fragment of the broadly neutralizing human antibody EDE1 C8
分子名称: BROADLY NEUTRALIZING HUMAN ANTIBODY EDE1 C8 HEAVY CHAIN, BROADLY NEUTRALIZING HUMAN ANTIBODY EDE1 C8 LIGHT CHAIN, ENVELOPE GLYCOPROTEIN E, ...
著者Rouvinski, A, Guardado-Calvo, P, Barba-Spaeth, G, Duquerroy, S, Vaney, M.C, Rey, F.A.
登録日2014-07-18
公開日2015-01-28
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Recognition Determinants of Broadly Neutralizing Human Antibodies Against Dengue Viruses.
Nature, 520, 2015
4M9K
DownloadVisualize
BU of 4m9k by Molmil
NS2B-NS3 protease from dengue virus at pH 5.5
分子名称: NS2B-NS3 protease
著者Yildiz, M, Hardy, J.A.
登録日2013-08-14
公開日2013-11-27
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.46 Å)
主引用文献Allosteric Inhibition of the NS2B-NS3 Protease from Dengue Virus.
Acs Chem.Biol., 8, 2013
4UT9
DownloadVisualize
BU of 4ut9 by Molmil
Crystal structure of dengue 2 virus envelope glycoprotein dimer in complex with the ScFv fragment of the broadly neutralizing human antibody EDE1 C10
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, BROADLY NEUTRALIZING HUMAN ANTIBODY EDE1 C10, ENVELOPE GLYCOPROTEIN E
著者Rouvinski, A, Guardado-Calvo, P, Barba-Spaeth, G, Duquerroy, S, Vaney, M.C, Rey, F.A.
登録日2014-07-18
公開日2015-01-28
最終更新日2024-05-01
実験手法X-RAY DIFFRACTION (3.2 Å)
主引用文献Recognition Determinants of Broadly Neutralizing Human Antibodies Against Dengue Viruses.
Nature, 520, 2015
4M9M
DownloadVisualize
BU of 4m9m by Molmil
NS2B-NS3 protease from dengue virus at pH 8.5
分子名称: NS2B-NS3 protease
著者Yildiz, M, Hardy, J.A.
登録日2013-08-14
公開日2013-11-27
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.53 Å)
主引用文献Allosteric Inhibition of the NS2B-NS3 Protease from Dengue Virus.
Acs Chem.Biol., 8, 2013
4M9T
DownloadVisualize
BU of 4m9t by Molmil
NS2B-NS3 protease from dengue virus in the presence of DTNB, a covalent allosteric inhibitor
分子名称: CHLORIDE ION, NS2B-NS3 protease
著者Bell, J.A, Yildiz, M, Hardy, J.A.
登録日2013-08-15
公開日2013-11-27
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.74 Å)
主引用文献Allosteric Inhibition of the NS2B-NS3 Protease from Dengue Virus.
Acs Chem.Biol., 8, 2013
5AAM
DownloadVisualize
BU of 5aam by Molmil
Structure of a redesigned cross-reactive antibody to dengue virus with increased in vivo potency
分子名称: ENVELOPE PROTEIN, SCFV513
著者Wong, Y.H, Robinson, L.N, Lescar, J, Sasisekharan, R.
登録日2015-07-27
公開日2015-08-05
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.49 Å)
主引用文献Structure-Guided Design of an Anti-Dengue Antibody Directed to a Non-Immunodominant Epitope.
Cell(Cambridge,Mass.), 162, 2015
2FOM
DownloadVisualize
BU of 2fom by Molmil
Dengue Virus NS2B/NS3 Protease
分子名称: CHLORIDE ION, GLYCEROL, polyprotein
著者Schiering, N, Kroemer, M, Renatus, M, Erbel, P, D'Arcy, A.
登録日2006-01-13
公開日2006-03-07
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Structural basis for the activation of flaviviral NS3 proteases from dengue and West Nile virus.
Nat.Struct.Mol.Biol., 13, 2006
4UTB
DownloadVisualize
BU of 4utb by Molmil
Crystal structure of dengue 2 virus envelope glycoprotein in complex with the Fab fragment of the broadly neutralizing human antibody EDE2 A11
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, BROADLY NEUTRALIZING HUMAN ANTIBODY EDE2 A11, ...
著者Rouvinski, A, Guardado-Calvo, P, Barba-Spaeth, G, Duquerroy, S, Vaney, M.C, Rey, F.A.
登録日2014-07-18
公開日2015-01-28
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (3.85 Å)
主引用文献Recognition Determinants of Broadly Neutralizing Human Antibodies Against Dengue Viruses.
Nature, 520, 2015
4UTC
DownloadVisualize
BU of 4utc by Molmil
Crystal structure of dengue 2 virus envelope glycoprotein
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, ENVELOPE GLYCOPROTEIN E, ...
著者Kikuti, C, Rouvinski, A, Guardado-Calvo, P, Barba-Spaeth, G, Duquerroy, S, Vaney, M.C, Rey, F.A.
登録日2014-07-18
公開日2015-01-28
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (3.08 Å)
主引用文献Recognition Determinants of Broadly Neutralizing Human Antibodies Against Dengue Viruses.
Nature, 520, 2015
2B6B
DownloadVisualize
BU of 2b6b by Molmil
Cryo EM structure of Dengue complexed with CRD of DC-SIGN
分子名称: CD209 antigen, envelope glycoprotein
著者Pokidysheva, E, Zhang, Y, Battisti, A.J, Bator-Kelly, C.M, Chipman, P.R, Gregorio, G, Hendrickson, W.A, Kuhn, R.J, Rossmann, M.G.
登録日2005-09-30
公開日2006-03-07
最終更新日2024-02-14
実験手法ELECTRON MICROSCOPY (25 Å)
主引用文献Cryo-EM reconstruction of dengue virus in complex with the carbohydrate recognition domain of DC-SIGN
Cell(Cambridge,Mass.), 124, 2006
4UIH
DownloadVisualize
BU of 4uih by Molmil
Cryo-EM structure of Dengue virus serotype 2 strain New Guinea-C complexed with human antibody 2D22 Fab at 37 degree C. The Fab molecules were added to the virus before 37 degree C incubation.
分子名称: ANTIGEN-BINDING FRAGMENT OF HUMAN ANTIBODY 2D22 -HEAVY CHAIN, ANTIGEN-BINDING FRAGMENT OF HUMAN ANTIBODY 2D22 -LIGHT CHAIN, DENGUE VIRUS SEROTYPE 2 STRAIN NEW GUINEA-C E PROTEIN ECTODOMAIN
著者Fibriansah, G, Ibarra, K.D, Ng, T.-S, Smith, S.A, Tan, J.L, Lim, X.N, Ooi, J.S.G, Kostyuchenko, V.A, Wang, J, de Silva, A.M, Harris, E, Crowe, J.E, Lok, S.-M.
登録日2015-03-30
公開日2015-07-15
最終更新日2024-05-08
実験手法ELECTRON MICROSCOPY (20 Å)
主引用文献Cryo-EM structure of an antibody that neutralizes dengue virus type 2 by locking E protein dimers.
Science, 349, 2015
4M9I
DownloadVisualize
BU of 4m9i by Molmil
A125C NS2B-NS3 protease from dengue virus at pH 5.5
分子名称: NS2B-NS3 protease
著者Yildiz, M, Hardy, J.A.
登録日2013-08-14
公開日2013-11-27
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Allosteric Inhibition of the NS2B-NS3 Protease from Dengue Virus.
Acs Chem.Biol., 8, 2013
4V0R
DownloadVisualize
BU of 4v0r by Molmil
DENGUE VIRUS FULL LENGTH NS5 COMPLEXED WITH GTP AND SAH
分子名称: FORMIC ACID, GLYCEROL, GUANOSINE-5'-TRIPHOSPHATE, ...
著者Zhao, Y, Soh, S, Zheng, J, Phoo, W.W, Swaminathan, K, Cornvik, T.C, Lim, S.P, Shi, P.-Y, Lescar, J, Vasudevan, S.G, Luo, D.
登録日2014-09-18
公開日2015-01-28
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献A Crystal Structure of the Dengue Virus Ns5 Protein Reveals a Novel Inter-Domain Interface Essential for Protein Flexibility and Virus Replication.
Plos Pathog., 11, 2015
3P97
DownloadVisualize
BU of 3p97 by Molmil
Dengue 3 NS5 Methyltransferase bound to the substrate S-Adenosyl methionine
分子名称: Non-structural protein 5, S-ADENOSYLMETHIONINE
著者Noble, C.G, Yap, L.J, Lescar, J.
登録日2010-10-16
公開日2010-12-08
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Small molecule inhibitors that selectively block dengue virus methyltransferase
J.Biol.Chem., 286, 2011
3P8Z
DownloadVisualize
BU of 3p8z by Molmil
Dengue Methyltransferase bound to a SAM-based inhibitor
分子名称: (S)-2-amino-4-(((2S,3S,4R,5R)-5-(6-(3-chlorobenzylamino)-9H-purin-9-yl)-3,4-dihydroxytetrahydrofuran-2-yl)methylthio)butanoic acid, Non-structural protein 5, S-ADENOSYL-L-HOMOCYSTEINE
著者Noble, C.G, Yap, L.J, Lescar, J.
登録日2010-10-15
公開日2010-12-08
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Small molecule inhibitors that selectively block dengue virus methyltransferase
J.Biol.Chem., 286, 2011
1OKE
DownloadVisualize
BU of 1oke by Molmil
Crystal structure of the dengue 2 virus envelope protein in complex with n-octyl-beta-D-glucoside
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, MAJOR ENVELOPE PROTEIN E, beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[beta-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Modis, Y, Harrison, S.C.
登録日2003-07-22
公開日2003-07-24
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献A Ligand-Binding Pocket in the Dengue Virus Envelope Glycoprotein.
Proc.Natl.Acad.Sci.USA, 100, 2003
1UZG
DownloadVisualize
BU of 1uzg by Molmil
CRYSTAL STRUCTURE OF THE DENGUE TYPE 3 VIRUS ENVELOPE PROTEIN
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, MAJOR ENVELOPE PROTEIN E, alpha-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[beta-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Modis, Y, Harrison, S.C.
登録日2004-03-11
公開日2005-03-15
最終更新日2024-10-09
実験手法X-RAY DIFFRACTION (3.5 Å)
主引用文献Variable Surface Epitopes in the Crystal Structure of Dengue Virus Type 3 Envelope Glycoprotein
J.Virol., 79, 2005
1OK8
DownloadVisualize
BU of 1ok8 by Molmil
Crystal structure of the dengue 2 virus envelope glycoprotein in the postfusion conformation
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, CHLORIDE ION, MAJOR ENVELOPE PROTEIN E
著者Modis, Y, Harrison, S.C.
登録日2003-07-19
公開日2004-01-29
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structure of the Dengue Virus Envelope Protein After Membrane Fusion
Nature, 427, 2004
1OAN
DownloadVisualize
BU of 1oan by Molmil
Crystal structure of the dengue 2 virus envelope protein
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, ENVELOPE GLYCOPROTEIN, SODIUM ION, ...
著者Modis, Y, Harrison, S.C.
登録日2003-01-16
公開日2003-05-16
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (2.75 Å)
主引用文献A Ligand-Binding Pocket in the Dengue Virus Envelope Glycoprotein
Proc.Natl.Acad.Sci.USA, 100, 2003
4V0Q
DownloadVisualize
BU of 4v0q by Molmil
Dengue Virus Full Length NS5 Complexed with SAH
分子名称: ACETATE ION, GLYCEROL, NS5 POLYMERASE, ...
著者Zhao, Y, Soh, S, Zheng, J, Phoo, W.W, Swaminathan, K, Cornvik, T.C, Lim, S.P, Shi, P.-Y, Lescar, J, Vasudevan, S.G, Luo, D.
登録日2014-09-18
公開日2015-01-28
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献A Crystal Structure of the Dengue Virus Ns5 Protein Reveals a Novel Inter-Domain Interface Essential for Protein Flexibility and Virus Replication.
Plos Pathog., 11, 2015
1R6R
DownloadVisualize
BU of 1r6r by Molmil
Solution Structure of Dengue Virus Capsid Protein Reveals a New Fold
分子名称: Genome polyprotein
著者Ma, L, Jones, C.T, Groesch, T.D, Kuhn, R.J, Post, C.B.
登録日2003-10-16
公開日2004-02-17
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献Solution structure of dengue virus capsid protein reveals another fold
Proc.Natl.Acad.Sci.USA, 101, 2004
4R8S
DownloadVisualize
BU of 4r8s by Molmil
Dengue serotype 3 methyltransferase bound to Sinefungin
分子名称: SINEFUNGIN, nonstructural protein NS5
著者Noble, C.G.
登録日2014-09-02
公開日2014-10-15
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.48 Å)
主引用文献Crystal structure of dengue virus methyltransferase without S-adenosyl-L-methionine
Antiviral Res., 111C, 2014
4R8R
DownloadVisualize
BU of 4r8r by Molmil
Dengue virus serotype 3 methyltransferase without a bound S-adenosyl methionine
分子名称: nonstructural protein NS5
著者Noble, C.G.
登録日2014-09-02
公開日2014-10-15
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.46 Å)
主引用文献Crystal structure of dengue virus methyltransferase without S-adenosyl-L-methionine
Antiviral Res., 111C, 2014
5CCV
DownloadVisualize
BU of 5ccv by Molmil
Crystal structure of full-length NS5 from dengue virus type 3
分子名称: RNA-directed RNA polymerase NS5, S-ADENOSYL-L-HOMOCYSTEINE, ZINC ION
著者Klema, V.J, Choi, K.H.
登録日2015-07-02
公開日2016-02-03
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (3.6 Å)
主引用文献Dengue Virus Nonstructural Protein 5 (NS5) Assembles into a Dimer with a Unique Methyltransferase and Polymerase Interface.
Plos Pathog., 12, 2016
4ALA
DownloadVisualize
BU of 4ala by Molmil
Structure of Dengue virus DIII in complex with Fab 2H12
分子名称: ENVELOPE PROTEIN, FAB 2H12 HEAVY CHAIN, FAB 2H12 LIGHT CHAIN, ...
著者Midgley, C.M, Flanagan, A, Mongkolsapaya, J, Grimes, J.M, Screaton, G.R.
登録日2012-03-02
公開日2012-06-06
実験手法X-RAY DIFFRACTION (1.84 Å)
主引用文献Structural Analysis of a Dengue Cross-Reactive Antibody Complexed with Envelope Domain III Reveals the Molecular Basis of Cross-Reactivity.
J.Immunol., 188, 2012

225946

件を2024-10-09に公開中

PDB statisticsPDBj update infoContact PDBjnumon