Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

8SPB
DownloadVisualize
BU of 8spb by Molmil
Caspase-4/Pro-IL-18 complex
分子名称: Caspase-4 subunit p10, Caspase-4 subunit p20, Interleukin-18
著者Pascal, D, Dong, Y, Wu, H, Jon, K.
登録日2023-05-02
公開日2023-11-22
最終更新日2023-12-27
実験手法ELECTRON MICROSCOPY (3.2 Å)
主引用文献Structural insights into cytokine cleavage by inflammatory caspase-4.
Nature, 624, 2023
4MXV
DownloadVisualize
BU of 4mxv by Molmil
Structure of Lymphotoxin alpha bound to anti-LTa Fab
分子名称: Lymphotoxin-alpha, anti-Lymphotoxin alpha antibody heavy chain, anti-Lymphotoxin alpha antibody light chain
著者Yin, J.P, Hymowitz, S.G.
登録日2013-09-26
公開日2013-11-13
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (3.2 Å)
主引用文献Dimerization of LT beta R by LT alpha 1 beta 2 is necessary and sufficient for signal transduction.
Proc.Natl.Acad.Sci.USA, 110, 2013
2X0Y
DownloadVisualize
BU of 2x0y by Molmil
Screening-based discovery of drug-like O-GlcNAcase inhibitor scaffolds
分子名称: 7-[(2S)-2,3-DIHYDROXYPROPYL]-1,3-DIMETHYL-3,7-DIHYDRO-1H-PURINE-2,6-DIONE, O-GLCNACASE NAGJ
著者Dorfmueller, H.C, van Aalten, D.M.F.
登録日2009-12-18
公開日2010-01-12
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (2.25 Å)
主引用文献Screening-Based Discovery of Drug-Like O-Glcnacase Inhibitor Scaffolds
FEBS Lett., 584, 2010
2GPW
DownloadVisualize
BU of 2gpw by Molmil
Crystal Structure of the Biotin Carboxylase Subunit, F363A Mutant, of Acetyl-CoA Carboxylase from Escherichia coli.
分子名称: Biotin carboxylase
著者Shen, Y, Chou, C.Y, Chang, G.G, Tong, L.
登録日2006-04-18
公開日2006-07-04
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Is dimerization required for the catalytic activity of bacterial biotin carboxylase?
Mol.Cell, 22, 2006
2GPS
DownloadVisualize
BU of 2gps by Molmil
Crystal Structure of the Biotin Carboxylase Subunit, E23R mutant, of Acetyl-CoA Carboxylase from Escherichia coli.
分子名称: Biotin carboxylase
著者Shen, Y, Chou, C.Y, Chang, G.G, Tong, L.
登録日2006-04-18
公開日2006-07-04
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Is dimerization required for the catalytic activity of bacterial biotin carboxylase?
Mol.Cell, 22, 2006
2AB0
DownloadVisualize
BU of 2ab0 by Molmil
Crystal Structure of E. coli protein YajL (ThiJ)
分子名称: YajL
著者Wilson, M.A, Ringe, D, Petsko, G.A.
登録日2005-07-14
公開日2005-10-11
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (1.1 Å)
主引用文献The Atomic Resolution Crystal Structure of the YajL (ThiJ) Protein from Escherichia coli: A Close Prokaryotic Homologue of the Parkinsonism-associated Protein DJ-1.
J.Mol.Biol., 353, 2005
5NGT
DownloadVisualize
BU of 5ngt by Molmil
Crystal structure of human MTH1 in complex with inhibitor 7-(furan-2-yl)-5-methyl-1,3-benzoxazol-2-amine
分子名称: 7,8-dihydro-8-oxoguanine triphosphatase, 7-(furan-2-yl)-5-methyl-1,3-benzoxazol-2-amine, SULFATE ION
著者Gustafsson, R, Rudling, A, Almlof, I, Homan, E, Scobie, M, Warpman Berglund, U, Helleday, T, Carlsson, J, Stenmark, P.
登録日2017-03-20
公開日2017-10-04
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.54 Å)
主引用文献Fragment-Based Discovery and Optimization of Enzyme Inhibitors by Docking of Commercial Chemical Space.
J. Med. Chem., 60, 2017
8GSR
DownloadVisualize
BU of 8gsr by Molmil
Crystal structure of L-2,4-diketo-3-deoxyrhamnonate hydrolase from Sphingomonas sp. (apo-form)
分子名称: L-2,4-diketo-3-deoxyrhamnonate hydrolase, MAGNESIUM ION
著者Fukuhara, S, Watanabe, Y, Watanabe, S, Nishiwaki, H.
登録日2022-09-07
公開日2023-02-08
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.73 Å)
主引用文献Crystal Structure of l-2,4-Diketo-3-deoxyrhamnonate Hydrolase Involved in the Nonphosphorylated l-Rhamnose Pathway from Bacteria.
Biochemistry, 62, 2023
8GST
DownloadVisualize
BU of 8gst by Molmil
Crystal structure of L-2,4-diketo-3-deoxyrhamnonate hydrolase from Sphingomonas sp. (pyruvate bound-form)
分子名称: L-2,4-diketo-3-deoxyrhamnonate hydrolase, MAGNESIUM ION, PYRUVIC ACID
著者Fukuhara, S, Watanabe, Y, Watanabe, S, Nishiwaki, H.
登録日2022-09-07
公開日2023-02-08
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.71 Å)
主引用文献Crystal Structure of l-2,4-Diketo-3-deoxyrhamnonate Hydrolase Involved in the Nonphosphorylated l-Rhamnose Pathway from Bacteria.
Biochemistry, 62, 2023
4ALX
DownloadVisualize
BU of 4alx by Molmil
Crystal Structure of Ls-AChBP complexed with the potent nAChR antagonist DHbE
分子名称: (4bS,6S)-6-methoxy-1,4,6,7,9,10,12,13-octahydro-3H,5H-pyrano[4',3':3,4]pyrido[2,1-i]indol-3-one, ACETYLCHOLINE BINDING PROTEIN, MAGNESIUM ION, ...
著者Shahsavar, A, Kastrup, J.S, Nielsen, E.O, Kristensen, J.L, Gajhede, M, Balle, T.
登録日2012-03-06
公開日2012-08-29
最終更新日2018-01-17
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Crystal Structure of Lymnaea Stagnalis Achbp Complexed with the Potent Nachr Antagonist Dh-Betab-E Suggests a Unique Mode of Antagonism
Plos One, 7, 2012
6YUA
DownloadVisualize
BU of 6yua by Molmil
CO-dehydrogenase coupled to the N-terminal domain of the Acetyl-CoA synthase from Clostridium autoethanogenum isolated after tryptic digestion.
分子名称: 1,2-ETHANEDIOL, CO dehydrogenase/acetyl-CoA synthase complex, beta subunit, ...
著者Wagner, T, Lemaire, O.N.
登録日2020-04-26
公開日2020-11-04
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (3.16 Å)
主引用文献Gas channel rerouting in a primordial enzyme: Structural insights of the carbon-monoxide dehydrogenase/acetyl-CoA synthase complex from the acetogen Clostridium autoethanogenum.
Biochim Biophys Acta Bioenerg, 1862, 2020
6Z00
DownloadVisualize
BU of 6z00 by Molmil
Arabidopsis thaliana Naa50 in complex with bisubstrate analogue CoA-Ac-MVNAL
分子名称: Acyl-CoA N-acyltransferases (NAT) superfamily protein, CARBOXYMETHYL COENZYME *A, MET-VAL-ASN-ALA-LEU
著者Weidenhausen, J, Kopp, J, Lapouge, K, Sinning, I.
登録日2020-05-07
公開日2020-12-30
最終更新日2024-05-01
実験手法X-RAY DIFFRACTION (1.42 Å)
主引用文献Structural and functional characterization of the N-terminal acetyltransferase Naa50.
Structure, 29, 2021
3GSY
DownloadVisualize
BU of 3gsy by Molmil
Structure of berberine bridge enzyme in complex with dehydroscoulerine
分子名称: 2,9-dihydroxy-3,10-dimethoxy-5,6-dihydroisoquino[3,2-a]isoquinolinium, 2-acetamido-2-deoxy-beta-D-glucopyranose, FLAVIN-ADENINE DINUCLEOTIDE, ...
著者Winkler, A, Macheroux, P, Gruber, K.
登録日2009-03-27
公開日2009-06-30
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (1.63 Å)
主引用文献Berberine bridge enzyme catalyzes the six electron oxidation of (S)-reticuline to dehydroscoulerine.
Phytochemistry, 70, 2009
6YTT
DownloadVisualize
BU of 6ytt by Molmil
CO-dehydrogenase/Acetyl-CoA synthase (CODH/ACS) from Clostridium autoethanogenum at 3.0-A resolution
分子名称: 2-{2-[2-(2-{2-[2-(2-ETHOXY-ETHOXY)-ETHOXY]-ETHOXY}-ETHOXY)-ETHOXY]-ETHOXY}-ETHANOL, CO dehydrogenase/acetyl-CoA synthase complex, beta subunit, ...
著者Wagner, T, Lemaire, O.N.
登録日2020-04-24
公開日2020-11-04
最終更新日2024-05-15
実験手法X-RAY DIFFRACTION (3.01 Å)
主引用文献Gas channel rerouting in a primordial enzyme: Structural insights of the carbon-monoxide dehydrogenase/acetyl-CoA synthase complex from the acetogen Clostridium autoethanogenum.
Biochim Biophys Acta Bioenerg, 1862, 2020
7LU6
DownloadVisualize
BU of 7lu6 by Molmil
Crystal structure of the mouse Kirrel3 D1 homodimer
分子名称: Kin of IRRE-like protein 3, SODIUM ION
著者Roman, C.A, Pak, J.S, Wang, J, Ozkan, E.
登録日2021-02-21
公開日2021-11-24
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Molecular and structural basis of olfactory sensory neuron axon coalescence by Kirrel receptors.
Cell Rep, 37, 2021
7LTW
DownloadVisualize
BU of 7ltw by Molmil
Crystal structure of the mouse Kirrel2 D1 homodimer
分子名称: Kin of IRRE-like protein 2, SODIUM ION
著者Roman, C.A, Pak, J.S, Wang, J, Ozkan, E.
登録日2021-02-20
公開日2021-11-24
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Molecular and structural basis of olfactory sensory neuron axon coalescence by Kirrel receptors.
Cell Rep, 37, 2021
6Z11
DownloadVisualize
BU of 6z11 by Molmil
Structure of Mycobacterium smegmatis HelD protein in complex with RNA polymerase core - State III, primary channel dis-engaged and active site interfering
分子名称: DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, DNA-directed RNA polymerase subunit beta', ...
著者Kouba, T, Koval, T, Krasny, L, Dohnalek, J.
登録日2020-05-11
公開日2020-11-04
最終更新日2024-05-22
実験手法ELECTRON MICROSCOPY (3.36 Å)
主引用文献HelD, a helicase-like protein from gram-positive bacteria in complex with RNA polymerase
To Be Published
3GYT
DownloadVisualize
BU of 3gyt by Molmil
Nuclear receptor DAF-12 from parasitic nematode Strongyloides stercoralis in complex with its physiological ligand dafachronic acid delta 4
分子名称: (14beta,17alpha,25R)-3-oxocholest-4-en-26-oic acid, Nuclear hormone receptor of the steroid/thyroid hormone receptors superfamily, SRC1
著者Zhou, X.E, Wang, Z, Suino-Powell, K, Motola, D.L, Conneely, A, Ogata, C, Sharma, K.K, Auchus, R.J, Kliewer, S.A, Xu, H.E, Mangelsdorf, D.J.
登録日2009-04-05
公開日2009-07-07
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Identification of the nuclear receptor DAF-12 as a therapeutic target in parasitic nematodes.
Proc.Natl.Acad.Sci.USA, 106, 2009
3HRX
DownloadVisualize
BU of 3hrx by Molmil
Crystal structure of phenylacetic acid degradation protein PaaG
分子名称: Probable enoyl-CoA hydratase
著者Kichise, T, Hisano, T, Takeda, K, Miki, K.
登録日2009-06-10
公開日2009-06-23
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Crystal structure of phenylacetic acid degradation protein PaaG from Thermus thermophilus HB8
Proteins, 76, 2009
6ZHY
DownloadVisualize
BU of 6zhy by Molmil
Cryo-EM structure of the regulatory linker of ALC1 bound to the nucleosome's acidic patch: hexasome class.
分子名称: Chromodomain-helicase-DNA-binding protein 1-like, DNA (110-MER) Widom 601 sequence, Histone H2A type 1, ...
著者Bacic, L, Gaullier, G, Deindl, S.
登録日2020-06-24
公開日2020-12-23
最終更新日2024-07-10
実験手法ELECTRON MICROSCOPY (3 Å)
主引用文献Mechanistic Insights into Regulation of the ALC1 Remodeler by the Nucleosome Acidic Patch.
Cell Rep, 33, 2020
4TWT
DownloadVisualize
BU of 4twt by Molmil
Human TNFa dimer in complex with the semi-synthetic bicyclic peptide M21
分子名称: (2,4,6-trimethylbenzene-1,3,5-triyl)trimethanol, ALA-CYS-PRO-PRO-CYS-LEU-TRP-GLN-VAL-LEU-CYS-GLY, GLYCEROL, ...
著者Luzi, S, Kondo, Y, Bernard, E, Stadler, L, Winter, G, Holliger, P.
登録日2014-07-01
公開日2015-02-04
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (2.85 Å)
主引用文献Subunit disassembly and inhibition of TNF alpha by a semi-synthetic bicyclic peptide.
Protein Eng.Des.Sel., 28, 2015
6Z1S
DownloadVisualize
BU of 6z1s by Molmil
Structure of Polyphenol Oxidase (mutant G292N) from Thermothelomyces thermophila
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Dimarogona, M, Nikolaivits, E, Valmas, A, Topakas, E.
登録日2020-05-14
公開日2021-03-24
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.53 Å)
主引用文献Considerations Regarding Activity Determinants of Fungal Polyphenol Oxidases Based on Mutational and Structural Studies.
Appl.Environ.Microbiol., 87, 2021
4UM5
DownloadVisualize
BU of 4um5 by Molmil
Crystal structure of 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase from Moraxella catarrhalis in complex with Magnesium ion and Phosphate ion
分子名称: 1,2-ETHANEDIOL, 3-DEOXY-D-MANNO-OCTULOSONATE 8-PHOSPHATE PHOSPHATASE KDSC, MAGNESIUM ION, ...
著者Dhindwal, S, Tomar, S, Kumar, P.
登録日2014-05-15
公開日2015-02-11
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.34 Å)
主引用文献Ligand-Bound Structures of 3-Deoxy-D-Manno-Octulosonate 8-Phosphate Phosphatase from Moraxella Catarrhalis Reveal a Water Channel Connecting to the Active Site for the Second Step of Catalysis
Acta Crystallogr.,Sect.D, 71, 2015
4UMF
DownloadVisualize
BU of 4umf by Molmil
Crystal structure of 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase from Moraxella catarrhalis in complex with Magnesium ion, Phosphate ion and KDO molecule
分子名称: 3-DEOXY-D-MANNO-OCTULOSONATE 8-PHOSPHATE PHOSPHATASE KDSC, 3-deoxy-alpha-D-manno-oct-2-ulopyranosonic acid, MAGNESIUM ION, ...
著者Dhindwal, S, Tomar, S, Kumar, P.
登録日2014-05-16
公開日2015-02-11
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.28 Å)
主引用文献Ligand-Bound Structures of 3-Deoxy-D-Manno-Octulosonate 8-Phosphate Phosphatase from Moraxella Catarrhalis Reveal a Water Channel Connecting to the Active Site for the Second Step of Catalysis
Acta Crystallogr.,Sect.D, 71, 2015
4UME
DownloadVisualize
BU of 4ume by Molmil
Crystal structure of 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase from Moraxella catarrhalis in complex with Magnesium ion and KDO molecule
分子名称: 3-DEOXY-D-MANNO-OCTULOSONATE 8-PHOSPHATE PHOSPHATASE KDSC, 3-deoxy-alpha-D-manno-oct-2-ulopyranosonic acid, MAGNESIUM ION
著者Dhindwal, S, Tomar, S, Kumar, P.
登録日2014-05-16
公開日2015-02-11
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.09 Å)
主引用文献Ligand-Bound Structures of 3-Deoxy-D-Manno-Octulosonate 8-Phosphate Phosphatase from Moraxella Catarrhalis Reveal a Water Channel Connecting to the Active Site for the Second Step of Catalysis
Acta Crystallogr.,Sect.D, 71, 2015

222415

件を2024-07-10に公開中

PDB statisticsPDBj update infoContact PDBjnumon